Sus scrofa (pig): 100623580
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Entry
100623580 CDS
T01009
Symbol
CLEC1B
Name
(RefSeq) C-type lectin domain family 1 member B
KO
K10070
C-type lectin domain family 1 member B
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
100623580 (CLEC1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssc04054
]
100623580 (CLEC1B)
04515 Cell adhesion molecules [BR:
ssc04515
]
100623580 (CLEC1B)
04091 Lectins [BR:
ssc04091
]
100623580 (CLEC1B)
Pattern recognition receptors [BR:
ssc04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
100623580 (CLEC1B)
Cell adhesion molecules [BR:
ssc04515
]
Lectins
Selectins and C-type lectins
100623580 (CLEC1B)
Lectins [BR:
ssc04091
]
C-Type lectins
NK cell receptors
100623580 (CLEC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
UL45
Chordopox_A33R
LapA_dom
VirB8
Motif
Other DBs
NCBI-GeneID:
100623580
NCBI-ProteinID:
NP_001302723
Ensembl:
ENSSSCG00000000650
UniProt:
A0A076KXE4
LinkDB
All DBs
Position
5:complement(61889874..61896964)
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AA seq
226 aa
AA seq
DB search
MQDEDGYVTLNVKTEKPALTSGDPAASSLWRVMALTLLVLCIGMVFGLVALGILSITQQH
NLRAENEHLSGTLKQLARKVCQDLIKQSGQEERHQCSPCEKNWRYHGDSCYGFFRHNLTW
EESKKYCIDTSATLLKIPSQNILQYLTSRTGLIRWVGLSRQNSKEAWMWEDGSVPSKNMI
KFSGNGTENMNCAYFHNGKIHPTFCENKHYLMCERKAGMPKVDQLL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgaagacggatatgtcaccttaaatgttaaaactgaaaaaccagctctcact
tcaggtgatcctgctgcatcctctctgtggcgtgtgatggctttgactctgctggtctta
tgcatagggatggtttttgggctggtggctctgggcattctgtctatcacgcagcaacac
aacctacgagctgagaatgaacatctctcaggaactctgaagcaattagcaaggaaggtc
tgccaagatttaataaaacaatcaggacaagaggaaagacatcagtgcagcccatgtgag
aaaaactggagatatcatggagacagttgctatggattcttcaggcacaacttgacctgg
gaagagagtaagaagtactgtatcgacaccagtgctacgcttctgaagatccccagccag
aatattctgcaatacctcaccagcaggactggattaatccgttgggttggattgtcccgc
cagaactccaaagaggcctggatgtgggaagacggctcagtcccctccaaaaatatgatt
aagttttctggaaatggaacagaaaatatgaattgtgcttattttcataatggaaaaatc
caccctaccttctgtgagaataaacattatttaatgtgtgagaggaaggcaggcatgcca
aaggtggaccaactactttaa
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