Sus scrofa (pig): 100623708
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Entry
100623708 CDS
T01009
Symbol
PTPRT
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100623708 (PTPRT)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
100623708 (PTPRT)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
100623708 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
I-set
ig
PTP-NADK
TM_ErbB1
Ig_2
Ig_3
Motif
Other DBs
NCBI-GeneID:
100623708
NCBI-ProteinID:
XP_020933770
LinkDB
All DBs
Position
17:complement(44717539..45880822)
Genome browser
AA seq
1523 aa
AA seq
DB search
MGWWVALGRAASCRGPFKVGLFFWEGGMCSFLGQLPVPLSAAQPWTHDGAERNGLETTLS
SPICFGDKGSLGGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPMLDPAVPTGSFMMV
NSSGRASGQKAHLLLPTLKENDTHCIDFHYYFSSRDRSSPGALNVYVKVNGGPQGNPVWN
VSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLAHPCRKAPHFLR
LQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHRRFSATVSVADT
AQRSVSKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLWIKPNANSIIGD
GPIILKEVEYRTTTGTWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPGEGGTGPPGPPL
TTRTKCADPVHGPQNVEIVDIRARQLTLQWEPFGYAVTRCHSYNLTVQYQYVFNQQQYEA
EELIQTSSHYTLRGLRPFMTIRLRLLLSNPEGQMESEELVVQTEEDVPGAVPLESIQGGP
FEEKIYIQWKPPNETNGVITLYEINYKAIGSLDPSADLSSQRGKVFKLRNETHHLFVGLY
PGTTYSFTIKASTAKGFGPPVTTRIATKISAPSMPEYDTDTPLNETDTTITVMLKPAQSR
GAPVSVYQLVVKEERLQKSRRAADIIECFSVPVSYRNASSLDSLHYFAAELKPANLPVTQ
PFTVGDNKTYNGYWNPPLSPLKSYSIYFQALSKANGETKINCVRLATKAPMGSARVTPGT
PLCLLTTGASTQNSNTVEPEKQVDNTVKMAGVIAGLLMFIIILLGVMLTIKRRRNAYSYS
YYLKLAKKQKETQSGAQREMGPVASADKPTTKLSTSRNDEGFSSSSQDVNGFTDGSRGEL
SQPTLTIQTHPYRACDPVEMSYPRDQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPE
GQTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYI
ATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRHPAEHTVGNATLGRAASPGMVKCV
RYWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCY
ATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRE
LRAQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDE
FQTLNIVTPRVRPEDCSIGLLPRNHDKNRSMDVLPLDRCLPFLISVDGESSNYINAALMD
SHKQPAAFVVTQHPLPNTVADFWRLVFDYNCSSVVMLNELDTAQLCMQYWPEKTSGCYGP
IQVEFVSADIDEDIIHRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVR
RLEKWQEQYDGREGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKS
NMVETLEQYKFVYEVALEYLSSF
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgggctggtgggtggcactgggcagggctgcttcctgcaggggccctttcaaggttggt
ctttttttttgggagggggggatgtgctcctttttgggtcaacttccagtgccgctgtca
gcagcccagccatggacccatgatggtgctgaacgtaatgggttagaaacgactctgtct
tcaccaatttgctttggagataaaggctccctaggaggtggctgttcctttgatgaacac
tacagcaactgtggttatagcgtggccctggggaccaatgggtttacctgggagcagatt
aacacgtgggagaaaccaatgctggacccagcagtccctacaggatccttcatgatggtg
aacagctctgggagggcctctggccagaaagcccaccttctcctgccgaccctgaaggag
aatgacacccactgcattgatttccattactacttctcgagccgagacaggtccagccca
ggggccttgaatgtctacgtgaaggtcaatggcgggccccaggggaaccccgtctggaac
gtgtctggggttgtcaccgagggctgggtgaaggcagaacttgccatcagcaccttctgg
ccgcatttctaccaggtgatatttgaatctgtctctttgaagggtcatcctggctacatc
gctgtggacgaggtccgggtccttgctcatccgtgccgaaaagcacctcactttctgcgg
ctccaaaatgtcgaggtgaatgtggggcagaatgccacgtttcagtgcattgctggcgga
aagtggtctcagcacgacaaactttggctccagcagtggaacggcagggacacggccctc
atggtcacccgcgtggtcaaccacaggcgcttctcggccacggtcagtgtggcagacact
gcccagcggagtgtgagcaagtaccgctgtgtgatccgctccgatgggggctctggtgtg
tccaactacgctgagctgattgtgaaagagcctcccacgcccatcgccccaccagagctg
ctggccgtgggggccacctacctgtggatcaagccgaatgccaactccatcattggggac
ggccccatcatcctgaaggaggtggagtatcgcaccaccacgggcacctgggcggagacc
cacatcgtcgactcacccaactataagctgtggcatctggaccccgatgtggagtatgag
atccgggtgctactcacacggccaggggaagggggcacaggacctccggggcctcccctc
accaccaggaccaagtgtgcagacccagtgcatggcccacagaacgtggagattgtggac
atccgagcgcggcagctgaccttgcagtgggagcccttcggctacgcggtgacccgctgc
catagctacaacctcacggtgcagtaccagtacgtgttcaaccagcagcagtacgaggct
gaggagctgattcagacctcctcccactacaccctgcggggcctgcgccccttcatgacc
atccggctgcggctgctgctgtccaaccctgagggccagatggagagcgaggagctggtg
gtgcagacagaggaggacgttccaggagctgttcctctagaatccatccaaggggggccc
ttcgaagagaagatctacatccagtggaagcctcccaatgagaccaacggggtcatcact
ctctatgagatcaactacaaggccattggctctctggacccgagtgctgacctctccagc
cagaggggcaaagtgttcaagcttcggaatgaaacccaccatctctttgtgggcctgtat
ccggggaccacctactccttcaccatcaaagccagcactgcaaagggctttgggcccccc
gtcaccaccaggatcgccaccaaaatttcagctccatcgatgcctgaatacgatacagat
accccactgaatgaaacagacacgaccatcacggtgatgctgaagcctgctcagtctcgg
ggagcccccgtcagtgtttatcagcttgtggtcaaggaggaacggcttcagaagtcacgg
agggcagccgacatcatcgagtgcttttcggtgccagtgagctacagaaacgcctccagc
ctggattctttacactactttgctgctgagttgaagcctgccaacctgcctgtcacccag
ccatttacagtgggggacaacaagacatacaatggctactggaaccctccactctcccct
ctgaaaagctacagcatctacttccaggcactcagcaaagcaaatggagagaccaaaatc
aactgtgttcgtctggctacaaaagcaccaatgggcagcgcccgggtgaccccggggact
ccactctgcctcctcaccacaggtgcctccactcagaattctaacacggtggagccggag
aagcaggtggacaacacggtgaagatggccggtgtgatcgccggcctcctcatgttcatc
atcattctcctgggagtgatgctcaccatcaaaaggagaagaaatgcttattcctactcc
tattacttgaagctggccaagaagcagaaggagacacagagtggagcccagagggagatg
ggccctgtggcctcagctgacaaacccaccaccaagctcagcaccagccgcaatgacgaa
ggcttctcctccagctcacaggacgttaacggattcacagatggcagccgcggggagctg
tcccagcccaccctgaccatccagacgcacccctaccgggcctgcgaccccgtggagatg
agctaccctcgggaccagttccagccagccatccgggtggctgacctgctccaacacatc
acccagatgaagagaggccagggctatgggttcaaggaggaatatgaggctttaccagag
gggcagacagcttcgtgggacacagccaaagaggatgagaaccgcaataagaatcgatat
ggcaacattatatcctatgaccattctcgagtgaggctgctggtgctggatggagaccca
cactctgactacatcaacgccaactacattgatgggtaccatcgacctcggcactacatt
gcaactcaaggtcccatgcaggagactgtcaaggacttctggagaatgatctggcaggag
aactcagccagcatcgtcatggtcacaaacctcgtggaagtgggcaggcacccagcggaa
cacactgtgggaaatgccactctaggccgtgctgcgtcccccggaatggtgaagtgtgtg
cgatactggccagacgacacagaggtctacggagacattaaagtcaccctgattgaaaca
gagcccctggcagaatatgtcatccgcaccttcactgtccagaagaaaggctaccatgag
atccgggagctccgcctcttccacttcaccagctggccggaccacggcgtcccctgctat
gctaccggcctcctgggcttcgtccgccaggtcaagttcctcaatcccccggaagctggg
cccatagtggtccactgcagtgctggggctgggaggaccggctgcttcatcgccattgac
accatgctcgacatggccgagaatgaaggcgtggtggacatcttcaactgtgtgcgtgag
ctccgtgcccagagggtcaacctggtgcagacggaggagcagtacgtgttcgtacatgac
gccattctggaagcatgcctctgtggcaacacagccatcccagtgtgcgagttccgctct
ctctactacaatatcagcaggctggacccccagaccaactccagccaaatcaaagatgaa
tttcagaccctcaacatcgtgactccccgggtccggccagaggactgcagcattgggctc
ctgccccggaaccacgataagaatcggagcatggatgtcctgcctctggaccgctgcctg
cccttcctcatctcagtggatggggaatccagcaactacatcaacgcagcactgatggat
agccacaagcagcccgccgcctttgtggtcacgcaacaccctctgcccaacactgtggca
gacttctggaggctggtgttcgactataactgctcctccgtggtgatgctgaacgagctg
gacaccgctcagctctgtatgcagtactggccagagaagacctcgggatgctatgggccc
atccaggtggagttcgtctctgcagacatcgacgaggacatcatccacaggatattccgc
atctgtaacatggctcggccacaggatgggtatcgcatagtccagcaccttcagtacatt
ggctggccggcctacagggatacacccccctccaagcgctctctgctcaaagtggttcga
cgcctggagaagtggcaggagcagtacgatgggagggagggacgcactgtggtccactgc
ctaaacgggggcggccgcagtggaaccttctgtgccatctgcagcgtgtgtgagatgatc
cagcagcaaaacatcatcgacgtgttccacatcgtgaaaacattacgtaacaacaagtcc
aacatggtggagaccctggaacagtataaatttgtatacgaggtggccctggaatattta
agctccttttag
DBGET
integrated database retrieval system
