Sus scrofa (pig): 100623770
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Entry
100623770 CDS
T01009
Symbol
SOX3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100623770 (SOX3)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100623770 (SOX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100623770
NCBI-ProteinID:
XP_003360512
Ensembl:
ENSSSCG00000022501
Vega:
OTTSUSG00000004900
UniProt:
A0A8D0VFP9
I3LG51
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Position
X:complement(115017704..115020601)
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AA seq
448 aa
AA seq
DB search
MRPARDNASGASSLQVPADLARSASSRLPFPPDPPAHRPPSAPPTESSGLFTVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAGAGGPAAPGGAGKSGANAAGGANAG
GGSGGGASGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADW
KLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAA
AAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPATMSSPPPPPALPQ
MHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAA
AAAAAAMSLGPMGTVVKTEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPL
PGGRLHSVHQHYQGAGTAVNGTVPLTHI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagcccgagacaacgcatcaggtgcgagtagcctgcaggttcccgctgacttg
gcgcggagcgcttcgtcacgcctgcccttcccgcccgacccgccggcccaccggcccccg
agcgcccctccgacggagtcctcaggccttttcaccgtggccgctccagctccgggagcg
ccttctcctcccgccactctggcgcaccttcttcccgccccggccatgtacagcctgctg
gagactgagctcaagaaccccgtggggccacccaccccggcggcaggcgcgggcggcccc
gcagcccccggcggcgcaggcaagagtggcgcgaacgcagccggcggggcgaacgcaggc
ggcggcagcggcgggggcgcgagcggcggcggcgggggcggcgggggcagcgatcaggac
cgcgtgaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgcaagatg
gccctggagaaccccaagatgcacaactctgagatcagcaagcgcttgggcgccgactgg
aaactgctgaccgacgcggagaagcggccgttcatcgacgaggccaagcggctgcgcgcc
gtgcacatgaaagagtacccggactacaagtaccggccgcgccgcaagaccaagacgctg
ctcaagaaggacaagtactcgctgcccggcggcctgctgccccccggcgctgcggccgcc
gctgcggccgccgctgccgccgccgccgccagcagcccggtgggcgtgggccagcgcctg
gacacgtacacacacgtgaacggctgggccaacggcgcgtactcgctggtgcaggagcag
ctgggctacgcgcagcccgccaccatgagcagcccgccgccgccgcccgcgctgccgcag
atgcaccgctacgacatggccggcctgcagtacagccccatgatgccgcccggcgcccag
agctacatgaacgccgccgccgccgccgccgccgcctcgggctacgggggcatggcgccc
tccgccgcggccgccgcggccgccgcctacgggcagcagcccgccacggccgccgccgcc
gcggccgccgccgccgccatgagcctgggccccatgggcacggtggtgaagaccgagccc
agctcgccgccgcccgccatcgcctcgcactcgcagcgcgcctgcctcggcgacctgcgc
gacatgatcagcatgtacctgccgcccggcggggacgcggctgacgccgcgtcgccactg
ccaggcggccgcctgcacagcgtgcaccagcactaccaaggcgccgggactgccgtcaac
ggaaccgtgccgctgacccacatctga
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