Sus scrofa (pig): 100623899
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Entry
100623899 CDS
T01009
Symbol
RPAP3
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100623899 (RPAP3)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100623899 (RPAP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_BSK1_C
TPR_19
TPR_16
TPR_12
TPR_14
TPR_9
ARM_TT21_4th
TPR_6
ANAPC3
MIT
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
100623899
NCBI-ProteinID:
XP_020948245
Ensembl:
ENSSSCG00000021166
LinkDB
All DBs
Position
5:complement(77968171..78066252)
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AA seq
740 aa
AA seq
DB search
MTSTNKAIELQLQVKQNAEELQDFMRDLENWEKDIKQKDMELRRQNGVPEENLPPIRNGN
FRKKKKGKVKESSTKTKDENTKNRIKSYDYEAWAKLDVDSILDELDKDESTHDSVSQESE
SEEDGIHVDSQKALALKEKGNKYFKQGKYDDAIECYTKGMDADPYNPVLPTNRASAYFRL
KKFAVAESDCNLALALNRSYTKAYLRRGAARFALQKLEDAKKDYEKVLELEPNNFEATNE
LRKINQALTSKENSCPKESDKMIKSAEGEKKHVEEQQNKQQAISEKDRGNAFFKEGKYER
AIECYTRGMAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTAR
TFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKKELIDRGHWDDVFLDSTQRQNVVRPI
DNPPHRGSTKPLKKVIIEETGNLIQTVDVPNSTTPAAPEHNPINLANVIAATGTTSENSS
QDDLLPTSDIPKAKVLKIEEISDPSALQSQVSLKKDVCQSFSEKISVEVDRTPAQVIRTV
LPPVPANSFQLESDFRQLKNSPDLLYQYLKQIEPSLYPKVFQKNLDPDVFNQIIKILHDF
YIEKEKPSLIFEILKRLSELRRFDMAVMFMSEPEKKITHVLFNHIDKSGLNDNSVEELKK
RYGPEPPPCVTGRHQFLLDPSTTQPRQCSSMHKSIWTAPSQLFCRQLLQASLSPPSCSLS
SCRLLLPRPAHRGTASLFVS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaacaaataaagcaattgaattacaactacaagtgaaacaaaatgcagaagag
ctgcaagactttatgagggatttagaaaactgggaaaaagatattaaacaaaaggatatg
gaactaagaagacagaatggtgttcctgaagagaatttgcctcctattcggaatgggaat
tttaggaaaaagaagaaaggcaaagttaaagagtcatctacaaaaaccaaagatgaaaac
acgaaaaacaggataaaatcttatgattatgaggcatgggcaaaacttgatgtggacagt
atcctcgatgagcttgacaaagatgagagtacccatgattctgtgtctcaagaatcagag
tcagaagaagatgggattcatgtggattcacaaaaggctcttgctctaaaagaaaagggc
aataaatacttcaaacaaggaaaatatgatgacgcgattgaatgctacaccaaaggcatg
gatgctgatccatataatcctgtattgccaacaaacagagcatcagcatacttcagactg
aaaaaatttgctgttgctgagtctgattgtaatttagcacttgccttgaatagaagttat
acaaaggcttatttaagacggggtgcggctcgatttgctttgcaaaaattagaggatgcc
aaaaaagattatgaaaaagtattagaactggaaccaaataactttgaagctacaaatgag
ctcaggaaaattaatcaggctttaacttccaaagaaaactcctgtccaaaggaatctgat
aaaatgattaagtcagctgaaggagagaaaaaacacgtggaagagcaacagaataaacag
caagccatttcagagaaagatcgggggaatgcatttttcaaagaggggaaatacgaaaga
gcaattgagtgctatactcgagggatggcagcagatggcgctaatgcccttcttccagct
aacagagcaatggcctatctgaagattcagaaatatgaagaggctgaaaaagattgcaca
caagctattttattagatggctcctattctaaagcttttgctagaagaggaactgcacga
acatttttgggaaagttaaatgaggccaaacaagattttgagaccgttttacttctggaa
cctggaaataagcaagcagtaaccgaactttctaaaattaaaaaggaattaattgacaga
ggacactgggacgatgtctttctcgattctactcaaaggcaaaacgtggtaagacccatt
gataatccacctcatcgcggatcaactaaaccgctcaagaaggttattattgaagagact
ggtaatttgatacagactgttgatgtgccaaatagcactactcctgctgctccagagcat
aatcctattaatctagcaaatgtaatagcagccacaggcacgacaagcgagaactcaagc
caggatgaccttttgcccacaagtgatatcccaaaagcaaaagtattgaaaatagaagaa
atcagtgatccttcagctctgcaatctcaagtcagtttgaaaaaggatgtatgtcagtct
ttcagtgagaagatttctgtagaagtagacagaacacctgctcaggttatcaggactgtc
cttcctccagttcctgcaaactcatttcagcttgaatctgatttcagacaattgaaaaat
tcaccagatttgttgtatcagtatttgaagcaaattgaaccatccttgtatcctaaggtg
tttcagaaaaatttagatccagatgtattcaaccagatcattaaaattctgcatgacttt
tacattgagaaagaaaagccatcactcatctttgaaatcttaaaaagactttctgaacta
agaaggtttgatatggctgtgatgttcatgtcagaacctgagaaaaaaattacacatgta
ttattcaatcacatagacaaatcaggattgaatgataattctgtcgaagaactcaaaaaa
agatacgggcctgagccacctccttgtgtcactggaagacaccagtttttattggatccc
agcaccacccaacccaggcagtgctcatctatgcacaagtccatctggactgctcctagt
cagctcttttgccgacagctgctgcaggcttccctatcaccaccatcttgtagcctctct
tcttgtcgtctgcttctccccaggccggcccacagaggcacagcctctctgttcgtttcc
tag
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