Sus scrofa (pig): 100624012
Help
Entry
100624012 CDS
T01009
Symbol
SYNRG
Name
(RefSeq) synergin gamma isoform X12
KO
K25219
synergin gamma
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100624012 (SYNRG)
Membrane trafficking [BR:
ssc04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
100624012 (SYNRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
100624012
NCBI-ProteinID:
XP_013845399
Ensembl:
ENSSSCG00000026596
LinkDB
All DBs
Position
12:complement(38974567..39069868)
Genome browser
AA seq
1315 aa
AA seq
DB search
MALRPGTGAGGSGAAGAGAGAAGGGSFMFPVAGGIRPPQAGMMPMQQQGFPMVSVMQPNM
QGMIGMNYSSQMSQGPIAMQAGIPMGPIPAGGMPYLGQAPFLGMRPPGPQYTPDMQKQFA
EEQQKRFEQQQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFS
RDAKMHPTPASHPKKPGPSLEEKLLVSCDISTSGQEQIKLNTSEGGHRALGPGSSKNHPS
LTANTGGAVDGRVSGTTTAEAEKTSDQNLSIEESGVGVFPSQDPVQPRMPPWIYNESLVP
DAYKKILETTMTPTGIDTAKLYPILMSSGLPRETLGQIWALANRTTPGKLTKEELYTVLA
MIAVTQRGVPAISPDALNQFPAAPIPTLSGFPMTLPSAVSQPTGMPSGPAGSMPLNLGQP
VMGINLVGPVGGAAAQTSSGFMSTYPANQVVKPEEDDFQDFQDASKSGSLDDSFSDFQEL
PASSKTNNSQHGNSAPSLLMPLPGTKASASMDKYAVFKGIAADKSSENTVPFGEPGDKYS
AFRELEQTAETKSLGENFAEFRSAGTDDGFTDFKTADSISPLEPPTKDKTFPAAFPSGTI
QQKPQTQVKNPLNLADLDMFSSVTSSSEKPLSFSTAFSASKSVSTRPQPAGSAATMTALA
STKTSSLADDFGDFNLFGEYSSPASIGEQDDFADFMAFSNSSLSSEQKSDDKYEALKEES
SPVPLTSSASSTGKSGQNSAAMSTKYDVFKQLSLEGPGLGVEELKENTPSGKSDDDFADF
HSSKLSSMNSDKSLGEKAVAFRHTKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQFDMK
LADVGGDLKHVMSDSSLDLPTVSGQHPPAADIEDLKHAAFGTCSSNLAVSTLTSCDWSDR
DVASQGRKLFPFVLPAGSGASPAASVLQKKETSFGSSESLTVTSLSKVTTFASEDALPEA
TFPAFANFKEVIPQAGEQKEYESADFKDFTRQDLPAAEWSQEAACPSPASSSTSHDTPRE
CADDFGEFQSEKPKISKFDFLVANSQGKMKSSEEMIQSELATFDLSVQGSHKRSLSLGDK
EISRSSPSPALEQPFRDRSNTLSEKPALPVIRDKYKDLTGEVEENERYAYEWQRCLGSAL
EVIKKANDTLNGISSSSVCTEVIQSAQGMEYLLGVVEVYRVTKRVELGIKATAVCSEKLQ
QLLKDIDKVWNNLIGFMSLATLTPDENSLDFSSCMLRPGIKNAQELACGVCLLNVDSRSR
KEEKPAEEHPKKAFNSETDSFKLAYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggccaggaacgggagctggcggcagcggggccgcgggagctggcgcgggg
gccgccggcggaggcagctttatgtttccggttgcaggtggaataagaccccctcaagca
ggaatgatgccaatgcagcaacaaggatttcctatggtctcagtcatgcagcctaacatg
caaggcatgataggaatgaattacagctctcaaatgtcccaaggacccattgccatgcag
gcaggcataccaatgggaccaataccagcaggaggaatgccttacctgggacaagcacca
ttcctggggatgcgtcctccaggcccacagtacactccagacatgcagaagcagtttgct
gaagagcagcaaaaacgatttgaacaacagcaaaagctcttagaagaagaaagaaaaaga
cgccagtttgaagagcagaagcaaaagctcagacttctgagtagtgtgaaacccaagaca
ggagagaagagtagagatgatgctttggaagctattaaaggaaacttagatgggttctcc
agagatgctaagatgcacccaactccagcatcacaccctaagaaaccaggcccttccttg
gaggagaagctcctagtatcttgtgatataagtacatctgggcaggaacaaattaaatta
aatacttctgaaggtgggcacagagccctaggcccaggttccagtaaaaaccaccccagt
ttaacggccaataccgggggtgctgtagatggacgtgtaagtggtaccactacggcagag
gcagaaaagacttcagaccaaaacctgtccattgaagagagtggtgtgggagtatttccc
tcacaggatcctgttcagcctagaatgcctccttggatttacaacgagagcttggttcca
gatgcctataagaaaattttagaaaccacaatgactccaactggaatagatactgctaaa
ctttatcccattctgatgtcatctggacttcccagggaaactcttggacagatatgggcc
ttggctaatcgaaccacacctggcaaacttactaaagaagaactttatacggttctggcc
atgatagcagtaacacagaggggtgttcctgccataagtccggatgctttaaatcagttt
ccagcagctcctatcccaactttaagtggctttcctatgaccttgccttctgcggtgagt
cagccgacggggatgccatcaggccctgcaggctccatgcccctcaacttgggacagccg
gtcatgggcattaatcttgttggaccagtcgggggagctgcagcccagacttccagtggc
ttcatgtcaacttaccctgcaaatcaggtggtaaaaccagaagaagatgacttccaggat
tttcaagatgcgtctaagtcaggatcccttgatgactcattcagtgatttccaagaattg
cctgcttcttcaaaaacaaataattctcagcatggaaacagtgccccttctttgttgatg
ccacttcctggaactaaagcatcagcttcaatggataaatatgctgtgtttaaaggaatt
gcagctgacaagtcctctgaaaatactgttccttttggagaacctggtgataaatatagt
gctttcagagaactcgaacagacagcagagactaaatctttaggggaaaactttgcagaa
ttcagatctgcgggaactgatgatggtttcaccgattttaaaactgccgatagtatctca
ccactagagccacccacaaaagacaaaacttttccagcagccttcccctcaggaactatc
caacagaaaccacagacccaagtgaaaaatcctctgaacttagcagacctagacatgttc
tcctcagttacctccagcagcgagaaaccattgtccttttcaactgcatttagtgcatca
aaatccgtttccacacgaccccagccagcaggttctgctgcaactatgacagcattggca
tcaactaaaacttctagtttggctgatgattttggagacttcaacctttttggagaatat
tctagtccagcatctattggggagcaggatgactttgcagattttatggctttcagtaat
agttctctttcctctgagcagaagtcagatgacaaatatgaggcccttaaagaggaatct
agtcctgtccctctaaccagcagtgcgagcagcaccgggaagagtggacagaactcagct
gccatgtccaccaaatacgatgtcttcaaacagctctctctggaaggaccgggactaggt
gttgaagagctgaaagagaacactccttcaggaaagagcgatgatgactttgctgacttc
cactccagcaaattgtcctccatgaactcggacaaatccctgggagagaaagcagtggct
ttcagacacaccaaagaagattcagcttcggtgaagtccctggatctcccttccatcggg
ggcagcagcgtcggcaaggaggactctgaagatgcgctctctgttcagtttgacatgaaa
ctggctgatgtgggaggcgatcttaagcatgtcatgtctgatagctctttggatttgcca
acagttagtggccagcatcctcctgctgcagatatagaggacttaaaacatgctgccttt
ggaacctgcagtagcaatttggcagtgagcacacttacgagctgtgactggtcagacagg
gatgttgcctctcagggcagaaaactctttccatttgtcctcccagcaggaagtggagcc
tcgccagctgcctccgtccttcaaaagaaagagacgtccttcggcagttccgaaagcctc
accgtgacatccctttccaaagtcacgaccttcgcaagcgaggacgcccttccggaggcg
acctttccagccttcgccaattttaaagaggtgattccgcaggccggcgagcaaaaggag
tatgaaagcgcggacttcaaggatttcaccagacaggacctgccagcagctgagtggagc
caggaggccgcgtgcccaagcccagcctccagcagcacttcccacgacaccccccgagag
tgtgccgatgacttcggagagtttcaaagtgaaaagcccaagatcagcaagtttgacttc
ctagtggccaattcacaaggcaaaatgaagtccagtgaggaaatgatccaaagcgagctg
gcaacctttgacctttctgttcaaggatcacacaagaggagtctgagccttggcgataaa
gaaataagccgttcttctccttccccggctttggagcagcctttcagagaccgctccaac
actctgagcgagaagcctgccctgcctgtcatccgcgacaagtacaaagacctgacgggg
gaggtggaggagaatgagagatacgcttatgaatggcagcggtgtctagggagcgccctg
gaggtcattaagaaggcaaatgataccttaaacggaatcagtagtagttctgtatgcaca
gaggtaattcagtcagctcaaggcatggagtatttattaggtgttgttgaggtgtacagg
gtaaccaagcgagtggagctggggataaaagccactgcagtgtgcagtgagaaactccag
cagctgctaaaggacatcgataaagtatggaataacctaatcggcttcatgtcactcgcc
acactcacgcctgatgaaaattccctggacttttcgtcctgtatgctgcggcctgggatt
aaaaatgctcaggagctggcttgcggggtgtgccttttaaacgtggactccaggagccgg
aaagaagagaagcctgcagaggaacatcctaaaaaagctttcaactcagaaacggacagc
ttcaagctggcatatggaggacaccagtatcacgccagctgtgccaacttctggatcaac
tgcgttgaaccaaaacctcctggcctcatcctgcctgatttgctctga
DBGET
integrated database retrieval system
