Sus scrofa (pig): 100624034 Help Entry 100624034         CDS       T01009                                  Symbol CAPRIN2 Name (RefSeq) caprin-2 isoform X1   KO K18744   caprin-2 Organism ssc  Sus scrofa (pig) Brite KEGG Orthology (KO) [BR:ssc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ssc03019]     100624034 (CAPRIN2) Messenger RNA biogenesis [BR:ssc03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Other mRNA localization factors      100624034 (CAPRIN2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Caprin-1_C Caprin-1_dimer C1q Motif Other DBs NCBI-GeneID:  100624034 NCBI-ProteinID:  XP_005664067 Ensembl:  ENSSSCG00000022611 LinkDB All DBs Position 5:43042910..43087644 Genome browser AA seq 1070 aa AA seqDB search MVQLSSSPFGYQSPSGHLEEGKEGNMKSSKTQVNHSQHGDSQRAVSPLQSTLSSAASPSQ AYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEF AKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLTQEHVQKDF KGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGT TYKHMKDLLSKLLNSGYFESIPVPKTAKEKEVSLEEEMLIKSEKKKQSLKTESVKESESL LELAQPEIQPQEFLNRRYMTEVDYSSKQGEEQSWETDYARKPNLPKCWDMLTEPDGQEKK QESFKSWESSVKHQEVSKPAVSLEQRKQEIPKLRSTLQEEQKKQDISKTKPTPSQWKQET PKSKVGYIQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWTPSLQSEQDITKSWTTPMCEE QDSRQSETPKSWENNVESQKHPLTPQSQISPKSWGVAAASLIPNDQLLPRKFNTEPKDVP KPMHQPVGSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSA TPGSPVASTEQNLSNQSDFLQEPLQAAASPVTCSSNACLVTTDQASSGSETEFMTSETPE AAVPSSKQPSSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPR KEQEIKESPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGS LAFYPAQTNVFPRPSQPFVNSRGSVRGCTRGGRLLTNSYRSPGGYKGFDTYRGPPSISNG NYSQLQFQAREYPGTPYSQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETF NSGDSGQGDSRSMTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPI VFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYAN DGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atggtgcaactctcttcatctccttttggttaccagtcaccttcaggccatttagaggaa gggaaagaggggaacatgaagtcatccaagacccaagtgaaccacagtcagcatggggac agccagagggccgtgagccccttgcagtctactctcagttctgctgcctctccttcccag gcatatgagacatatattgataatggactcatatgccttaaacacaaaatcagaaacatc gagaaaaagaagctcaaactggaagattataaggatcgcctgaaaaatggagagcaactt aatccagaccagttggaagcagttgagaaatatgaagaagtgctacataatttagaattt gccaaggaacttcagaaaaccttttctggactgagccaagatctacttaaagcgcagaag aaagcccagagaagggagcacatgctaaaacttgaggctgagaagaaaaagcttcgcact atacttcaagttcagtatgtattacagaacttgacacaggaacatgtgcagaaagacttc aaagggggcttgaatggtgcagtgtatttgcctttaaaagaacttgactacctcattaaa ttttcaaaactgacctgtcctgaaagaaatgaaagtctgagtgttgaagaccagatggag cagtcatccttgtacttttgggaccttttggaaggtagtgagaaagcagtggtaggaacg acatacaaacacatgaaagatctactgtctaaattgctgaactcaggctattttgaaagt atcccagttccaaaaactgctaaggaaaaagaggtatcattggaggaagaaatgctaata aaatcagagaagaaaaaacaatcattgaagactgaatctgtcaaagagtcagagtctctt ttggaacttgcacagccagagatacaaccacaagagtttcttaacagacgctacatgaca gaagtagattattcaagcaaacaaggtgaagagcaatcttgggaaacagattatgctaga aaaccaaatctccccaaatgttgggatatgcttactgaaccagatggtcaggagaagaaa caggaatccttcaagtcctgggagtcttctgttaagcaccaggaggtatcaaagcctgca gtttccttagaacagaggaaacaagagattccaaaactcaggtccactctgcaggaggag cagaagaagcaggacatctccaaaaccaagccaactcctagccagtggaaacaagaaact cctaagtccaaagtaggatatattcaagaggaaccgaagaagcaggagacaccaaaacct tggccagttcagctgcagaaagatcaggatccaaagaagcaaactccaaagtcttggaca ccttccctgcagagtgaacaggacattaccaagtcatggaccactcccatgtgtgaagaa caggattcaagacagtcagagacaccaaaatcctgggaaaacaatgttgagagtcaaaaa caccctttaacaccacaatcacagatttctccaaagtcctggggggtagctgcagcaagc ctcataccaaatgaccagctcctgcccaggaagttcaatacagaacccaaagatgtgcct aagcctatgcatcagcctgtaggttcttcctctacccttccaaaggatccagtattgagg aaagaaaaactgcaggatctgatgacccagattcaaggaacttgtaactttatgcaagaa tctattctggattttgacaaaccttcaagtgcaattccatcatcacagccgccttcagct actccaggtagcccagtagcatctacagaacaaaatctatccaatcaaagtgattttctt caagagccgttacaggctgctgcttctccagtaacttgtagctcaaatgcttgcttggtt actaccgatcaggcttcttcaggatctgaaacagagtttatgacctcagagactcctgag gcagcagttccctcaagcaagcagccgtcttcactagcttctccaaatccgcccatgtca aagggctctgaacagggcttccagtcacctccagcaagtagtagttcagtaaccattaac acagcaccttttcaagccatgcagacagtatttaatgttaatgcacctttgcctccacgg aaagaacaagaaataaaagaatccccttattcatctggctacaatcaaagttttactaca gcgagtacacaaacaccaccccagtgccaactgccagctatacacgtagaacaaactgtc ctttctcaagagactgcagcaagttatcctgatggaactattcaagtaagcaatggtagc cttgccttttacccagcacagacgaatgtatttcccagaccctctcaaccatttgtcaat agccggggatctgttagaggatgtactcgtggtgggagattactaaccaattcgtatcgg tcccctggtggttataaaggttttgatacttatagaggacctccttcaatttccaatgga aattatagccagctacagttccaagctagagagtatcccggaacaccttattcccaaagg gataacttccagcagtgttacaagcgaggagggacatctggtggtcctcgggcaaattct agagcagggtggagtgattcttctcaggtgagcagcccagaaagagacaacgaaacgttt aacagtggtgactctggacaaggagactcgcgtagcatgacccctgtggatgtgccagtg acaaacccagcagccaccatactgccagtacacgtgtatcccctgcctcagcagatgcga gttgccttctcagcagccagaacctctaatcttgcccctggaactttagaccaacctatt gtgtttgatcttcttctgaacaacttgggagaaacttttgatcttcagcttggtagattt aattgcccggtgaatggcacatatgttttcatttttcacatgctaaagctggcagtgaat gtgccactgtatgtcaacctcatgaagaatgaagaggtcttggtatctgcctatgccaat gatggtgctccagaccatgaaactgctagcaatcatgcaattcttcagctcttccaggga gaccagatatggttacgtttgcacaggggagcaatttatggaagtagttggaaatattct acattttcaggctatcttctttaccaagattga

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