Sus scrofa (pig): 100624061
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Entry
100624061 CDS
T01009
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100624061 (GTF2E1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100624061 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100624061 (GTF2E1)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
100624061 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
100624061 (GTF2E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Zf-C2H2_ZNF451_C
Cas12f1-like_TNB
DUF7385
zf-H2C2_2
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
100624061
NCBI-ProteinID:
XP_020925962
Ensembl:
ENSSSCG00000022832
ENSSSCG00000029517
UniProt:
A0A8D1DYF3
A0A8W4FNR9
LinkDB
All DBs
Position
13:complement(139565891..139609483)
Genome browser
AA seq
438 aa
AA seq
DB search
MADPDVLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERD
STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDARTLLARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDRAATTAGAAGLAGGHHREAWA
TKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKERPIWLRESTVQGAYTSEEMKEGGI
DIDSFQEREEGRAGPDDNEEVMRALLIHEKKTPSAVAGSVGAAAPVTTANGSDSESETSE
SDDDSPPRPAAVAAHHGEEDEEDDEFEEVADDPIVMVAGRPFSYSEVSQKPELVAQMTPE
EKEAYIAMGQRMFEDLFE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccagatgtcctcactgaggttcctgcagcactgaagcggttggccaagtat
gtgatccgggggttttatggcatcgagcatgctttggccttggacatcttgatccgaaac
ccctgtgtgaaagaggaggacatgctggagctgctcaagttcgatcggaagcaacttaga
tcagtcttgaataatttaaagggagacaaattcatcaaatgcagaatgagggtagagact
gctgcagatgggaaaaccactcgtcataactactactttatcaattatcgtactcttgtt
aatgtggtaaaatataaattggaccacatgaggaggagaattgaaaccgatgagagagat
tccaccaaccgggcttccttcaaatgtcctgtctgtagtagtacttttacagacttagaa
gctaatcagctctttgatcccatgacaggaactttccgctgtactttttgccatacagag
gtagaagaagatgaatcagcaatgcccaaaaaagatgcacgcacacttttggcaaggttt
aatgaacaaattgagcccatttatgctttgcttcgggagacagaggatgtgaacttggcc
tatgaaatacttgaaccagaacccacagaaataccagccttaaaacagagcaaggaccgt
gcagcaactactgctggagctgctggcctggcaggtgggcaccatcgggaagcatgggcc
accaagggcccctcttatgaggacttatacactcagaatgttgtcattaacatggatgac
caagaagatcttcaccgagcctcgctggaggggaaatctgccaaggagagacctatttgg
ctaagagagagcactgtccaaggggcttatacctctgaagagatgaaggaaggtggcata
gatatagactcatttcaggagcgtgaggaaggccgtgcagggccagatgacaatgaggaa
gtcatgcgagcactgctcattcatgagaagaagaccccctctgccgtagcaggctcagtg
ggggcggctgctcctgtgaccactgccaatggtagtgactctgagagtgagaccagtgag
tcagatgacgactccccaccccgaccggcagctgtggctgcacatcatggggaagaggat
gaggaggatgatgaatttgaggaagtagcagatgaccccattgtcatggtggctggccgt
ccgttctcctacagcgaagtgagccagaagccagagctggtggcccagatgacaccagag
gagaaggaagcatacatagcaatgggacagcgcatgtttgaggacctctttgagtga
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