Sus scrofa (pig): 100624109
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Entry
100624109 CDS
T01009
Name
(RefSeq) LOW QUALITY PROTEIN: neuroligin-4, X-linked isoform X1
KO
K07378
neuroligin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100624109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100624109
Membrane trafficking [BR:
ssc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
100624109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
BD-FAE
Abhydrolase_3
Motif
Other DBs
NCBI-GeneID:
100624109
NCBI-ProteinID:
XP_013846313
Ensembl:
ENSSSCG00000012097
LinkDB
All DBs
Position
X:complement(2701397..3103824), Y:complement(1645491..1946441)
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AA seq
836 aa
AA seq
DB search
MSRPQGLVWLPLVFTPVCVMLHAKVLLCITALAIKFTLIDSQAQYPVVNTNYGKIRGLRT
PLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRNATQFAAVCPQHLDERSLL
HDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDGANTKKNADDISSNDRGEDEDIH
DQNSKKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKG
NYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAIIQS
GTALSSWAVNYQPAKYTRILADRVGCNMLDTTDMVDCLRNKNYKELIQQTITPATYHISF
GPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVDGIVDNEDGVTPNDFDFSVS
NFVDNLYGYPEGKDTLRETIKFMYTDWXDKENPETRRKTLVALFTDHQWVAPAVATADLH
AQYGSPTYFYAFYHHCQSEMKPSWADSAHGDEVPYVFGIPMIGPTELFSCNFSKNDVMLS
AVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWSKYNPKDQLYLHIGLKPRVRD
HYRATKVAFWLELVPHLHNLNEIFQYVSTTTKVPPPDMTSFPYGTRRSPAKIWPTTKRPA
ITPANNPKHSKDPHKTGPEDTTVLIETKRDYSTELSVTIAVGASLLFLNILAFAALYYKK
DKRRHETHRRPSPQRNTTNDIAHMQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPDY
TLTLRRSPDDIPLMTPNTITMIPSTLTGMQPLHTFNTFSGGQNSSNLPHGHSTTRV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaccccagggactggtatggcttccgctggtcttcactcccgtctgtgtcatg
ctccacgccaaggtcctgctgtgcatcaccgccctggccatcaagttcacgctcatagac
agccaggcccagtaccccgtggtcaacaccaactatggcaaaatccggggcttgagaaca
cccttgcccaatgagattttggggcctgtcgagcagtacctgggtgtcccttatgcctcg
cctccgaccggagagaggcgcttccagcccccggagcccccgtcctcgtggacggggatt
cggaacgccacccagtttgcggccgtgtgcccgcagcacctggacgaacggtctctcctg
cacgacatgctgcccatctggttcaccgccaacttggacacgctaatgacctacgtccaa
gatcagaacgaagattgcctttacttaaacatctacgtgcccacggaggacggagccaac
acaaagaaaaatgctgatgatataagcagtaacgaccgtggtgaagatgaagacatccac
gatcagaacagtaagaagccagtgatggtgtacattcacggcggctcctacatggaagga
acagggaacatgattgacgggagcatcctggccagctacggcaacgtcatcgtcatcacc
atcaactaccgcctggggattctcgggtttttaagtaccggcgaccaggcggccaaaggc
aactacggactcctggatcagattcaggccttacgatggattgaggagaacgtcggggcc
tttggtggggaccccaagagagtgaccatctttggctccggtgcaggtgcctcttgtgtc
agcctgttgaccttgtctcactactcagaaggtctgttccagaaagccatcatccagagc
gggactgcgctgtccagctgggccgtgaactaccagcctgccaagtacactcggatattg
gcggacagggtcggctgcaacatgctggataccacggacatggtggattgccttcggaac
aagaactacaaagagcttattcagcaaaccatcaccccggccacgtaccacatttccttc
gggcccgtcatcgacggggacgtgatcccggacgacccccagatcctcatggagcagggc
gagttcctgaactacgatatcatgctgggcgtcaaccagggggaggggctcaagttcgtg
gacggcatcgtggacaacgaggacggcgtgacgcccaacgacttcgacttctccgtgtcc
aactttgtggacaacctctacggctacccggaaggcaaggacaccctgcgggaaaccatc
aagtttatgtacacggactggngcgacaaggaaaaccccgagacgcggcgaaaaaccttg
gtggccctcttcacggaccaccagtgggtggcgcccgccgtggccaccgcggacctgcac
gcccagtatggctcgcccacctacttctacgccttctaccaccactgccaaagcgagatg
aagcccagctgggccgactcggcccacggcgacgaggtcccctacgtcttcgggattccc
atgatcggtcccaccgagctcttcagctgcaacttctccaagaatgatgtcatgctcagc
gcagtggtcatgacctactggacaaacttcgccaaaaccggcgaccccaaccagcctgtt
cctcaggacaccaagttcattcacaccaaacccaaccgctttgaggaagtggcctggtcc
aagtataaccccaaagaccagctctacctacacatcggcctgaagcccagagtgcgggac
cactaccgggccaccaaagtggccttctggctggaactggtaccccacctgcacaacctg
aacgagatcttccagtacgtctccaccaccaccaaggtcccacctcccgacatgacctcc
ttcccttacggaactcggcggtcccctgccaagatctggcccaccaccaagcgcccggcc
atcacgcccgccaacaaccccaaacactccaaggaccctcacaagacggggcccgaggac
accaccgtcctcatcgagaccaaacgggattactccacggagctgagcgtcaccatcgcc
gtgggggcctccctgctcttcctcaacatcttggccttcgccgcgctgtactacaagaag
gacaagcggcgccacgagacgcaccggcgccccagcccccagaggaacaccaccaacgac
atcgcgcacatgcagaatgaggagatcatgtccctgcagatgaaacagctggagcacgac
cacgagtgcgagtccctgcaggctcatgacacgctgaggctgacctgtcccccggactac
accctcacgctgcgccggtccccggatgatatcccgctcatgacgccaaacaccatcacc
atgattcccagcaccctcacggggatgcagccgctgcacaccttcaacacgttcagcggg
ggccagaacagtagcaatctaccccacggacactcgaccacgcgagtatag
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