Sus scrofa (pig): 100624231
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Entry
100624231 CDS
T01009
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100624231 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100624231 (NIPBL)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
100624231 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
100624231
NCBI-ProteinID:
XP_013840191
Ensembl:
ENSSSCG00000016842
UniProt:
A0A8D1MFX9
A0A4X1T9D7
LinkDB
All DBs
Position
16:22152455..22364373
Genome browser
AA seq
2804 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNARIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNLHDNKVSGSLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
SLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQSEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
SQQEQTAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASVTQDSDSIKKPEEIKQCNDAPISVLQEDIIGNLKSTPENHPETP
KKKSDPELSKNEMKQNESRLAESKPNENRLVETKSSESKLDTKIEIQTEEPKQNESRTIE
SKQNESTTAEPKQNENRLSDTKPNDNKQNNGRSETAKSRPETPKQKGESRPETPKQKSEG
RPETPKQKGDGRPETPKQKGEGRPETPKQKNEGRPETPKHRHENRRDPGKPSTEKKPEMS
KHKQDIKSDSPRLKSERAEALKQRPDGRSVSESLRRDHDSKQKSDDRSESERHRGDQSRV
RRPETLRSSSRNEHGIKSDGSKPDKLERKHRHESGDSRERLSSGEQKSRPDSPRVKQGDS
NKSRPDKPGFKSPNSKDDKRTEGNKSKIDSNKTHPDNKAEFPSYLLGGRSGALKNFVIPK
IKRDKDGNVTQETKKMEMKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDR
EDKSRSSLKPIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVN
EKPKYAEISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRS
SGGGRYRNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFK
RFTASIENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTD
KTVKVLNILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTS
PNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQ
RVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTA
VFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQC
VVHLPSSEKDSNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRP
LFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARL
RKDAVTSKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQW
FRDTTLETEKAMKSQKDEESSEGTHHAKEVETTGQIMHRAESRKKFLRSIVKTTPSQFST
LKMNSDTVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVV
AVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDT
GISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPH
NDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVE
HILKYEESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQND
FMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVT
QNFKFVWACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLED
FKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNNIL
SDKKSSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQ
LYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQ
QLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIR
GNRQHRRAFLISLLNLFDDTAKTEVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVS
GSNLLQSFKESMVKDKRKERKSSPSKENESSESEEEVSRPRKSRKRVDSDSDSDSEDDIN
SVMKCLPENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAI
NRKTGVHFHPKQTLDFLRSDMANSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVS
ASTNARNKAITSLLGGGSPKNNAAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQ
MNESVDVMDVIAICCPKYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLV
PWVDTIKESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8415 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccatcactactcttgcggggattgctagtctcaca
gacctcctgaaccagctgcctcttccatcccctttacctgctacaactacaaagagcctt
ctctttaatgcacgaatagcagaagaggtgaactgccttttggcctgtagggatgataat
ttggtttcacagcttgtccatagcctcaaccaagtatcaacagatcacatagaattgaaa
gataaccttggcagtgatgatccagaaggcgacataccagtcttgttgcaggccgtcctg
gcaaggagtcctaacgttttcagggagaaaagtatgcagaacagatatgtacaaagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aattatcagcaaaccactatctcacatagtccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagcccatatgcccca
caaagccctgcaggatacatgccatattcccatccttcaagttatacaacacatccacag
atgcagcaagcatcggtatcaagtcccattgttgcaggtggtttgagaaacctacatgat
aataaagtttctggttcgttgtctggcaattctgctaatcatcatgctgataatcctaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtagtgacgatggagat
tcttcaacaatgaggaatgctgcatcttttcccttgaggtctccacagccagtgtgttcc
cctgctggaagtgatggaactccaaaaggatcaagaccacctttaattctacagtctcag
tctctaccttgttcatcacctcgagatgttccaccagacatcttgttagattctccagaa
agaaaacaaaagaagcaaaagaaaatgaaattaggcaaggatgaaaaagaccagagtgag
aaagctgcaatgtatgatatcattagctctccatccaaggactcaactaaacttacgtta
agactttctcgtgtaaggtcttcagatatggaccagcaagaggatatgctttctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtacccaggacagact
tcaaaaacacccattactccacaggatgtaaaccgcccactaaatgctgcacagtgttta
tcgcagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctacgaaacagccccagacttctgtggtacagaaccagcaacaggtatca
caacagggacctatatatgatgaagtggaattggatgcattggctgaaattgagcgaata
gagagagaatcagctattgaaagggagcgtttttcaaaagaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggaagagtggactctcaggcttctgtaactcaggat
tcagactccataaaaaagcctgaagaaatcaaacaatgtaatgatgcacctatttctgtt
cttcaggaagatattattggaaatcttaaatctacaccagaaaaccatcctgagactcct
aaaaaaaagtctgatcctgagctttcaaagaatgaaatgaaacaaaatgaaagtagattg
gcagaatctaaaccaaatgaaaacagattggtagagacaaaatctagtgaaagtaagtta
gatactaaaattgagatacaaacagaagaacctaaacagaatgagagcagaacgattgaa
tccaagcaaaatgagagcaccacagccgagcctaaacagaatgaaaatagactgtctgac
acaaaaccaaatgacaacaaacaaaataatggtagatcagaaacagcaaagtcaagacct
gaaaccccaaagcaaaagggtgaaagccgacctgaaactccaaaacaaaagagtgagggg
cgtcctgaaaccccaaagcaaaagggcgatggacggcctgaaactccaaagcagaaaggt
gagggccgacctgaaactccaaagcaaaaaaatgaaggtcgtcctgaaacaccaaaacat
agacatgaaaataggagggatcctggaaaaccatcaacagagaaaaaacctgaaatgtct
aaacataaacaggatattaaatccgattcacctcggttaaaatcagaaagagctgaagcc
ttaaagcagagacctgatgggcgatctgtttctgagtcactaagacgtgaccatgatagt
aaacaaaagtcagatgacaggagtgaatctgagcgacatcgaggtgatcaatctagggtt
cgaagaccagaaacattgagatcctctagtagaaatgaacatggcattaaatctgatggt
tcaaaacctgataaactagaaagaaaacacagacatgaatcaggggactcaagggaaaga
ctgtcttctggggagcagaaatcaagacctgacagtcctcgtgttaaacaaggagattct
aataaatcaagacctgataagcctggttttaaatcaccaaatagtaaagatgacaaaagg
acagaaggcaacaagagtaaaatagacagtaataaaacgcaccctgacaataaggcagaa
tttccaagttatttgttggggggcaggtctggtgcattgaaaaattttgtcattccaaaa
atcaagagggataaagatggcaatgttactcaggagacaaagaaaatggaaatgaaagga
gagcagaaagacaaagtagaaaaaatgggattagttgaagatctaaataaaggagctaag
cctgtagttgttctgcaaaaactgtctttggatgatgttcagaaacttattaaagataga
gaggataaatcaagaagttcccttaaacctatcaagaataaaccatcaaaatcaaataaa
ggtagtatagatcaatcagtgttaaaagaattaccccctgaactcctggcagaaattgaa
tctaccatgccactttgtgaacgtgtgaaaatgaataaacgcaagcgtagcacagttaat
gaaaagccaaaatatgctgaaatcagttcagatgaagataatgatagtgatgaagctttt
gaatcctctaggaaacgacataaaaaagatgatgataaagcttgggaatatgaagagcgt
gacagaagaagctctggggatcataggagaagtggccactctcatgaaggaagaaggagt
tcgggtggtggtcgttatcgaaaccgaagtccatcagattctgacatggaagattattct
cctcctcccagccttagtgaggttgctagaaaaatgaagaaaaaagaaaaacagaagaag
cggaaagcttatgaaccaaaactaacacctgaagaaatgatggattcttcaacttttaag
agattcacagcctcaatagaaaatattttggataatttagaagatatggattttactgca
tttggtgatgatgatgaaatccctcaggaactgctcttaggaaaacatcagcttaatgaa
ctcggcagtgaatctgctaaaattaaagcaatgggtataatggataagctttccactgac
aaaactgtgaaagtcctaaatatcttggagaagaatattcaagatgggtcaaagctctcc
actttgttaaatcataataatgatactgaagaagaagaaaggttatggagagaccttatt
atggagagagtgacaaaatcagcagatgcctgtcttacaactatcaacattatgacatcc
cctaacatgccaaaagctgtgtatattgaagatgtaattgaaagagttatacaatacact
aaatttcatttgcagaatacactttatcctcagtatgatcctgtctacagattagatcct
catggaggaggcttattaagttcaaaggcaaaacgggctaaatgttctacccataagcag
agagtaatagtaatgctttataataaagtttgtgacattgttagcagcttatcagaatta
ttagaaatacaacttcttacagacacaacaattcttcaggtatcatcaatgggaataaca
ccattttttgtagaaaatgtcagtgaactacaattatgtgccattaagttagtcactgca
gtattctcaagatatgaaaaacataggcagttaattttggaagaaatttttacttcactt
gcaagactacctaccagcaaaaggagcttgaggaacttcaggttaaatagtagtgatatg
gatggagagcctatgtatattcagatggttacagcactggttttacaactgattcagtgt
gtagtacacttaccatcatcagagaaggactctaattcagaagaagactcaaataaaaaa
gttgaccaagatgttgtcattaccaattcttatgaaacagccatgcgaacagcccaaaac
ttcctttccattttccttaaaaaatgtggtagtaagcaaggtgaagaagattacagaccc
ttatttgaaaattttgttcaagaccttctttcaacagtcaataagcctgaatggccagct
gctgaactactccttagtttgttagggagactgttggttcatcaattcagtaacaagtca
acagagatggctttaagagtggcatctctggattaccttggaactgttgctgcacgactg
aggaaagatgctgttacaagcaaaatggatcaagggtctatagaacgaattttgaaacag
gtttcaggaggagaagatgaaatccagcaattgcaaaaagcattgcttgattacttggat
gaaaacactgagactgatccttccctagtgttttctcgtaaattctatatagcccagtgg
ttccgtgatacaacactggaaacagaaaaagcaatgaaatcacaaaaagatgaagaatca
tctgaaggaacgcaccatgcaaaggaagttgagacaactggtcaaattatgcatcgagct
gaaagccggaaaaagtttcttagaagcattgttaaaactacaccttctcagttcagcaca
ttaaagatgaactctgatactgtggattatgatgatgcttgtttgattgttcgatacttg
gcctctatgaggccgtttgcccagagctttgatatttatttgacacagattcttcgagtt
cttggtgaaaatgcaattgccgttcgaacaaaagccatgaagtgtttatctgaggttgtt
gctgtagaccccagtattctagcaaggctggatatgcagcgaggagttcatggtcgattg
atggataattccaccagtgtccgggaagcagcagtcgaattactaggacgatttgtcctt
tgtagacctcagcttgctgagcagtattatgatatgctgattgaaagaatattggatact
ggtatcagtgtcagaaaaagggtaataaagattctaagagacatctgtattgaacaacca
acatttccaaaaattacggaaatgtgtgtaaaaatgattcgcagagtgaatgatgaagag
ggcattaagaaattagtaaatgaaacattccaaaaactctggtttactccaactccacac
aatgacaaagaagcaatgacaaggaaaattttaaatatcactgatgtggttgcagcatgc
agagatactgggtatgattggtttgagcaactccttcaaaacttgttgaagtctgaagag
gattcctcatataaacctgtgaagaaagcttgtactcaacttgttgataacctagttgag
cacattcttaaatatgaggaatctctagctgactctgacaataaaggtgtgaattctgga
agattggtagcttgcataaccactttgttcttattcagcaaaataagaccccagctcatg
gttaaacatgccatgactatgcagccatatcttaccactaaatgtagtacacaaaatgat
ttcatggttatctgcaatgttgcaaaaatcctagagctggttgtaccactgatggagcat
ccaagtgaaactttccttgccactattgaagaagatctaatgaagcttatcatcaaatac
ggcatgactgtagtacaacattgtgtaagctgtcttggagcagttgtaaataaagtgaca
caaaattttaaatttgtatgggcctgtttcaatagatactatggtgccatttcaaaatta
aagagccagcaccaggaggacccaaataacacttcacttctaacaaacaaaccagcactt
cttagatcccttttcactgttggagcactatgtcggcattttgattttgatctggaagat
tttaaaggcaacagtaaggttaacataaaggataaagtacttgaactattgatgtatttt
acaaagcattcagatgaagaagtacaaacaaaagccatcattggtctaggatttgccttt
attcagcatccaagtctaatgtttgagcaagaggtgaaaaatctatataataacatttta
tctgataaaaaatcctcagtaaatttaaaaatacaagtgttaaaaaacctccagacctac
ctacaagaagaagatacacgtatgcagcaggcagatagagactggaagaaggttgcaaaa
caggaagatttaaaagaaatgggtgatgtttcctcagggatgagtagttctatcatgcag
ctttacctcaaacaggtgcttgaggcgttttttcacacccaatcaagtgtacgccacttt
gccctaaatgtcattgcattgactctgaaccagggtcttattcatccagttcagtgtgtg
ccatatttaattgctatgggcacagacccagaaccagctatgcggaacaaagctgatcag
caacttgtggaaatagacaaaaaatatgctggattcatacatatgaaagcagtggctggt
atgaagatgtcttaccaggtacaacaggcaatcaacacatgcctaaaagatcctgtaagg
ggtttccgacaagacgagtcctccagtgctttgtgttcacacctttactccatgattcgt
ggaaaccgccaacacagacgagcctttctaatttctttactcaacctctttgatgacaca
gcaaaaacagaagtgaatatgctcttgtacatagcagacaatctagcctgttttccatac
cagacacaggaagagccgttgtttataatgcatcatatagacattacactctcagtttct
ggtagtaacctactgcagtcattcaaggagtctatggtaaaagacaaaaggaaagagaga
aaatcatctcctagtaaggaaaatgagtcaagcgagagtgaagaagaagtctccaggcct
cggaagtcacggaaacgagtagattccgattccgattccgattcagaagatgacataaat
tcagtgatgaaatgtttgccagaaaattcagctcctttaattgagtttgcaaatgtctcg
cagggtattttattgcttctgatgttaaaacaacatttgaagaatctctgtggcttttct
gatagtaaaattcagaaatactctccatctgaatctgcaaaagtgtatgataaggcgata
aaccgaaaaacaggagttcattttcatcccaaacaaacactggacttcctgcggagtgat
atggctaattccaaaatcactgaagatgtgaagaggagtatagtaaaacagtatctagat
ttcaaacttctcatggaacatctggaccctgatgaagaggaagaagaaggggaggtgtcg
gctagcacaaatgctcgaaacaaagcaattacctcgctgcttggaggaggcagccctaaa
aataatgcagcagcagagacagaagatgatgaaagtgatggggaggatagaggaggaggc
acttcagggtcattgagaaggtcaaaacgaaattcagactctacggagttggcagcacag
atgaatgaaagtgttgacgtcatggatgtcatcgctatttgctgtccaaagtacaaagat
cgaccacaaattgcaagagtagtacagaaaaccagcaatggcttcagtgttcagtggatg
gcaggctcctacagtggctcctggactgaggctaagcgccgtgatggccgcaaactggtg
ccttgggtagacactattaaagagtcagacattatttacaaaaaaattgctctaacgagt
gctaataagctgactaataaagttgttcagactttacgatccctgtatgccgccaaggat
gggacttccagctaa
DBGET
integrated database retrieval system
