Sus scrofa (pig): 100624340
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Entry
100624340 CDS
T01009
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
100624340 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100624340 (USP38)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100624340 (USP38)
Peptidases and inhibitors [BR:
ssc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100624340 (USP38)
Ubiquitin system [BR:
ssc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100624340 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
HPF1
Motif
Other DBs
NCBI-GeneID:
100624340
NCBI-ProteinID:
XP_020956325
LinkDB
All DBs
Position
8:complement(84567476..84601044)
Genome browser
AA seq
1041 aa
AA seq
DB search
MDKILEGLVSSSHPLPLKRVIVRKVVESAENWLDEAQCEAMFDLTTRLILEGQDPFQRQV
GHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSV
LDLFSLLQVEVHRMVCERPEPHLCARLSDLLSDFVQCIPKGKLSITFCQQLVRTIGHFQC
VSTQEKELREYVSQVTKVSNLLQNIWKGEPSTLLPSLQEVFASISSTDASFEPSVALASL
VQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVNLVH
SFRSDGLPSSTAFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILNQS
AWTSQSNSLASCLSRVSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNG
CNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEE
KILKVQPSHKPSESPGCSETSLQEVANKAAGLTETSCTSDGEKTLIEKMFGGKLQTHICC
LNCRSTSQKVEAFTDLSLAFCPSSSMENLSFQDPASSGSSHDGGLMQGRVPGPSKEPGVY
NPATAAFACDSAVSEGMVGSPDEFRCAEDISVPNDSRKMLVNKDVPQKPGGETTPSVTDL
LNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKIL
DNVSLPLVLELPVKRTTSFSSLSESWSLDVDFTDISENLAKKLKPSGTEEACCPKLVPYL
LSSVVVHSGVSSESGHYYSYARNITGTECSYQLCHQPETLALASSQGHLPGRDSPSAVIE
QDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQNSTNSLGGSNST
TGLWVNGDPPLQKELMEAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPG
SCGPTGGGGGGGFNTVGRLVF
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggagggcctggtgagctcttcgcaccccctgcccctaaaacgggtg
attgtgaggaaggtggtggagtcggcggagaattggctggacgaggcgcagtgcgaggcc
atgtttgacctgacgacccggcttatcttggagggccaggacccctttcagcggcaagtg
ggccaccaagtgctggaggcctacgcgcggtaccaccggccagaattcgagtccttcttc
aataagactttcgtgctgggcctccttcagcagggctaccactcgctggacaggaaggac
gtagccatcctggactacattcacaacggcttgaaactgatcatgagctgcccctcggtg
ctggacctcttcagcctgctgcaggtggaggtgcatcggatggtgtgtgagaggcccgag
ccgcacctgtgcgcccgactcagcgacctcctgagcgacttcgtgcagtgcatccccaag
gggaagttgtccatcactttttgtcaacagctggttcgaacgataggccacttccagtgc
gtgtccacccaggagaaagagctgcgggaatatgtctcgcaggtgacaaaagtgagtaac
ttgctgcagaatatctggaagggggagccctccaccctgctgccttccctgcaagaagtt
tttgcaagcatttcttccacagatgcatcatttgaaccatctgtagcgttggcaagcctt
gtgcagcacattcctcttcagatgattacagttctcatcaggagccttaccacggatcca
aatgtaaaagatgcaagtatgacccaagctctttgcagaatgattgactggctgtcctgg
ccattggctcagcatgtagacacatgggtgattgcactcttgaaaggactggcagctgtc
cagaagtttactattttgatagatgttactttactgaaaatagagctggtttttaatcgc
ctttggtttcctcttgtgagacccggtgctcttgcagttctttctcacatgctacttagt
tttcagcattctccagaggcgtttcatttgattgttcctcatgtagttaatttggttcac
tccttcagaagtgatggtctgccttccagtacagccttcctagtgcagttaacagaactg
atacactgtatgatgtatcattattctggatttccagatctctatgaacctatcctggaa
gcaataaaggattttcctaagcccagtgaagagaagattaaattgattctcaatcaaagt
gcctggacttctcaatccaattctttggcatcttgcttgtctagagtttctggaaaatct
gaaactgggaaaactggtcttattaacctagggaatacatgttatatgaacagtgttata
caagcattgtttatggccacagatttcaggagacaagtcttatctttaaatctaaatggg
tgcaattcattaatgaaaaaattacagcatctttttgcctttttggctcatacacagaga
gaagcatatgcacctcggatattctttgaggcttccagacctccatggtttacgccccga
tcgcagcaagactgttctgagtacctcaggtttctactagacaggctccatgaagaagaa
aagatcttaaaagttcagccctcacacaagccttctgaaagtcctgggtgcagtgaaact
tctttacaagaagtagccaataaggcagctggactaacagagacctcttgcacaagtgat
ggtgagaagacattaattgaaaaaatgttcggaggaaaactacaaactcacatatgttgt
ttgaactgcaggagtacctcacaaaaagtagaagcctttacagatctttcacttgccttt
tgtccttcctcttctatggaaaacttgtcttttcaagatccagcatcatcaggcagttca
catgatggtggtctgatgcagggcagggtacctggtccttcaaaagaaccaggagtctat
aatccagcaacagctgcctttgcctgtgactcagctgtcagtgaaggaatggtgggcagt
cctgatgagtttcgctgtgctgaagacatttctgtccctaatgactctcgcaagatgctt
gttaataaagacgtacctcagaaaccaggaggtgaaaccacaccttcagtaactgactta
ctaaattattttttggctccagagattcttactggtgacaaccaatactattgtgaaaac
tgtgcctctctgcagaatgctgagaaaactatgcaaatcacagaggaacctgaatacctt
attcttactctcctaagattttcatatgatcagaagtaccatgtgagaagaaaaattcta
gacaatgtgtcactgccactggttttggagttgccagttaaaagaactacttctttctct
tcgttatcagaaagttggtctctagatgttgacttcactgatattagtgagaatctagct
aaaaaattaaagccttctggaactgaagaagcttgctgccccaaattggtgccctatcta
ttgagttctgttgtggttcactctggtgtatcctctgaaagcgggcattactattcttat
gccagaaacatcacaggtaccgagtgctcataccagctgtgtcaccagcctgaaactctg
gcactagcctcctcccagggtcatttaccaggaagagatagtcccagtgcagttattgaa
caggatttggaaaataaggaaatgtcaaaagagtggtttttatttaatgacagcagagtg
acatttacttcatttcagtcagtccagaaaattacgagtagatttccaaaggacacagct
tatgtgcttttgtacaaaaagcagaacagcactaatagtttaggtggtagtaattcaacc
actggactctgggtaaatggagacccacctctacagaaagaactaatggaagctataaca
aaagacaataaactatatttacaggaacaagagttgaatgctcgagcccgggccctgcaa
gctgcatctgcctcctgttcatttcggcccaatggatttgatgacaatgatccaccagga
agctgtggaccaactggtggtgggggtggaggaggatttaatacagttggcagactcgta
ttttga
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