Sus scrofa (pig): 100624476
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Entry
100624476 CDS
T01009
Symbol
PRDM16
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00310
Lysine degradation
ssc01100
Metabolic pathways
ssc04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100624476 (PRDM16)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100624476 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100624476 (PRDM16)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100624476 (PRDM16)
Enzymes [BR:
ssc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
100624476 (PRDM16)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100624476 (PRDM16)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100624476 (PRDM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
SET
zf-C2H2_11
Zap1_zf1
C2CH-3rd_BIRD-IDD
zf-H2C2_5
zf-BED
Tub_N
Motif
Other DBs
NCBI-GeneID:
100624476
NCBI-ProteinID:
XP_020950868
LinkDB
All DBs
Position
6:64704181..65012580
Genome browser
AA seq
1279 aa
AA seq
DB search
MRSKARARKLAKSDGDLVNNMYGPDPDLLAGESAEDETEDSIMSPIPMGPPSPFPTSEDF
TPKEGSPYEAPVYIPEDIPIPPDFELRESSIPGAGLGIWARKKMGVGERFGPYMVAPRAT
LKEADFGWEHMLTDTEVASQEGCIQKISEDLGSGKFCVDANQAGAGSWLKYIRVACSCDD
QNLTMCQINEQIYYKVIKDIEPGEELLVHVKEGAYSLGTVPPSLDEEPTFRCDACDELFQ
SKLDLRRHKKYACSSVGAALCEGLAEELKPEGLGGGGGDGQAHECKDCERIFPTEYSLEQ
HMTVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRS
QHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHAD
CRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYPPGGLFAPGLPLTPSPMLDKAKPPASL
NHAGLGFNEYFPSRPHPGSLPFSAAPPAFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSP
LNHTQDAKLPSPLGNPALPLVSAVGNSSQGTAAAAGPEEKPESRRDDAYAAAKLRPRGSD
LSDGSDFEDINTTTGTDLDTTTGTGSDLDSDVDSDRDKAKAKAKAAEGKPELAGGMVPPG
APNSVGEVPVFYSQHFLPPPEEQLLTASGAAGDSIKAIASIAEKYFGPGLVGMRERKLGA
LPYHSVLPXQLLPSFPHSLYPFTDRSLAHNLLVKAEPRSPRDALKAGGPSAESPFDLTTK
PKEAKPVPPAPKAPPTLAPGEEQPLDLSIGSRARASQGGGGREPRQNHVYGERRLGAGQG
LPKPCPAQLPQQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGVLKEKYLRPAPLLFHPQV
SAIETMTEKLESFAALKADSGGSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGK
IFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFG
QQTNLDRHLKKHEHEHAPVSQHSGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRN
FIANSEMNQASTRSDKRPEVQDLDGTSQCPGLAGGKPEDAEEEEEEDELEEEDEDSVAGK
SQDDAASPTPDPQGAYEDEEDEEPPAALAVGFGHTRRCVEEQPGGLLALEPMPTFGKGLD
LRRAAEEAFEVKDVLNSTLDSETLKQTLYRQAKNQAYAMMLSLTEDPPLHASSQSPLDAW
LNVTGATPEAGAFNPINHL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccaaggcgagggcgaggaagctagccaaaagtgacggcgacctcgtcaataac
atgtacggcccggaccctgacctgctggccggcgagagcgcggaggacgagaccgaggac
agcatcatgtcccccatccccatggggccgccgtcccccttccccaccagcgaggacttc
actcccaaggaaggctcgccctacgaggcccccgtctacatccccgaggacatccccatc
ccgccagacttcgagctccgggagtcctccatcccgggggccggcctgggcatctgggcc
cggaagaagatgggggtcggggagcggttcggcccatacatggtggctccgcgggctacg
ctgaaggaggcggacttcggatgggagcacatgctgaccgacacggaggtggcgtcccag
gagggctgcatccaaaagatctccgaagacctgggcagtgggaagttctgcgtggatgct
aatcaggccggggcgggaagctggctcaagtacatccgcgtggcatgctcctgtgacgac
cagaacctcaccatgtgtcagatcaacgagcagatttattataaagtcattaaggacatt
gagccaggagaagagctgctggtccatgtgaaagaaggcgcctactccctggggacagtg
ccccccagcctggacgaggagcccaccttccgctgtgacgcgtgtgacgagctcttccag
tccaagctggacctgcgacgccacaagaagtacgcgtgcagctcggtgggggccgcgctc
tgcgagggcctggccgaggagctcaagccggagggcctgggcggcgggggcggcgacggg
caggcccacgagtgcaaggactgtgagaggattttccccaccgagtacagcttggagcag
cacatgactgtccacacggaggagcgtgagtacaagtgtgaccagtgccccaaggccttc
aactggaagtccaacctcatccgccaccagatgtcccacgacagcggcaagcgcttcgaa
tgtgaaaactgtgtgaaggtcttcacggaccccagcaatctgcagcggcacatccgctcc
cagcacgtgggcgcccgggcgcacgcctgccccgactgcggcaagacctttgccacgtcc
tcaggcctcaagcagcacaagcacatccacagcaccgtcaaacctttcatatgtgaggtc
tgccacaagtcctacacgcagttctccaacctgtgccggcacaagcggatgcacgccgac
tgccgcacgcagatcaagtgcaaggactgcggacagatgttcagcactacctcgtccctc
aacaagcaccggcgcttctgcgagggcaagaaccattacccgccgggcggcctcttcgcc
ccgggcctgcccctgacccccagccccatgctggacaaggccaagccccccgccagcctc
aaccatgccggcctgggcttcaacgagtacttcccctcccggccgcacccgggcagcctg
cccttctcggcggcgccccccgccttccccgcgctcacgcctggcttcccgggcatcttc
cccccgtccctgtacccccggccgcctctgctacctcccacgccgctgctcaagagccct
ctgaaccacacgcaggacgccaagctccccagccccctggggaacccggccctgcccctc
gtctctgccgtgggcaacagcagccaggggactgcggcagccgcggggcccgaggagaaa
ccggagagccgccgggacgatgcctacgccgcggctaagctcaggccccggggtagcgac
ctgtcggacggcagcgacttcgaggacatcaacaccacgacggggaccgacctggacacg
accacaggcacgggctccgacctggacagcgacgtggacagcgatcgcgacaaggccaag
gccaaggccaaggcggccgagggcaagcctgagcttgcaggcggcatggtgccccccggc
gccccgaacagcgtgggtgaggtgcccgtcttctactcgcaacacttcctcccgccgccc
gaggagcagctgctgacggcctcgggcgccgcgggtgactccatcaaggccatcgcctcc
atcgccgagaagtacttcgggcctggcctcgtgggcatgcgggagcggaagctgggcgcg
ctgccctaccactccgtgctgcccntccagctcctgcccagcttcccccactccctctac
cccttcacggaccgcagcctcgcccacaatctgctggtcaaggccgagcccaggtctccc
cgcgacgccctcaaggcgggcggccccagtgctgagtcccccttcgacctcaccaccaaa
cccaaagaggccaagcccgtcccgcccgcacccaaggcaccgcccaccctggcgccgggc
gaggagcagccgctggacctgagcatcggcagccgcgcgcgggccagccagggcggaggg
ggccgggagccccgccagaaccacgtctatggcgagcgcaggctgggcgccggccagggg
ctgcccaagccatgcccagcgcagctgccgcagcagccctctctgcactatgccaagccg
tcacccttcttcatggaccccatctacagcagggtggagaagcggaaggtgaccgacccc
gtcggcgtcctcaaggagaagtacctgcggccggccccgctgctcttccacccccaggtg
tcagccatcgagaccatgacggagaagctggagagcttcgcggccctgaaggcggactca
ggcggctccctgcagcccctcccccaccaccccttcaacttccggtccccacccccgacg
ctctcggaccccatcctcaggaagggcaaggagcgctacacgtgcaggtactgtggcaag
attttcccgcgatcagcaaacctcacgagacacctaaggacacacaccggggagcagccg
tacaggtgtaagtactgcgaccgctccttcagcatctcctccaacctccagcggcacgtc
cgcaacatccacaacaaggagaagcctttcaaatgccacctgtgcaaccgctgcttcggg
cagcagaccaacctggacagacacctcaagaagcacgagcacgagcacgcaccagtgagc
cagcattcgggggtcctcaccaaccacctggggaccagcgcctcctcccccacctccgag
tcggacaaccacgcacttttagacgagaaggaagactcctatttctctgaaatcagaaac
tttatcgccaacagcgagatgaaccaagcctcgacgcgatcggacaaacggccggaagtg
caggacctggacggcacctcccagtgcccgggcctggcgggcgggaagccggaggatgcg
gaggaggaggaggaggaggacgagctggaggaggaagatgaagacagtgtggcagggaag
tcccaggacgacgcggcgtcccccacccccgacccacagggcgcctacgaggacgaggag
gacgaggagccgcccgccgccctggccgtgggcttcggccacacccgaaggtgtgttgag
gagcagccgggcggtctgttagctttggagccgatgccgacttttgggaaggggctggat
ctccgcagagcagctgaggaagcatttgaagttaaggatgtgcttaattccaccttagat
tctgagactttaaaacagaccctgtacaggcaggctaagaaccaggcgtacgcaatgatg
ctgtccctgaccgaggacccccctctccacgcctcctcccagagcccgctggacgcttgg
ttgaacgtcacgggagccacgcccgaggccggagcctttaaccccatcaaccacctgtga
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integrated database retrieval system
