Sus scrofa (pig): 100624513
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Entry
100624513 CDS
T01009
Symbol
GRIK1
Name
(RefSeq) glutamate receptor ionotropic, kainate 1 isoform X4
KO
K05201
glutamate receptor, ionotropic kainate 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100624513 (GRIK1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100624513 (GRIK1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100624513 (GRIK1)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
Glutamate (ionotropic)
100624513 (GRIK1)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
100624513
NCBI-ProteinID:
XP_003358953
UniProt:
A0A4X1U9Z3
A0A8D0IEX9
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Position
13:complement(192877707..193296954)
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AA seq
918 aa
AA seq
DB search
MERRTLLAQPRLWTRDISWTLLYFLCYVLPQTAPQVLRIGGIFETVENEPVNVEELAFKF
AVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ
SICNALEVPHIQTRWKHPSVDNKDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS
TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEIL
KQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIDKWSME
RLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRF
MNLIKEAQWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGI
WNSNSGLNMTDGNKDRSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCL
DLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREK
VIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT
PYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTL
IIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKM
WAFMSSRQQTALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG
VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDNKEASALGVENIGGIFI
VLAAGLVLSVFVAIGEFIYKSRKNNDIEQAFCFFYGLQCKQTHPTNSTSGTTLSTDLECG
KLIREERGIQTQSSVHTV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggagcgccgcacactcctcgcccagcccaggctctggaccagggacatcagctggaca
cttctctatttcctctgctacgtccttccccagaccgcaccgcaagtactcaggatcgga
gggatttttgaaactgtggaaaatgaacccgttaatgttgaagaattagcgttcaagttt
gctgtcaccagcattaacagaaatcgaactctgatgcctaacaccacattaacctatgac
atccagagaattaacctttttgatagttttgaagcctcacggagagcatgtgaccagctg
gctcttggtgtggctgctctctttggcccttcccacagctcctctgtcagtgctgtgcag
tctatttgcaatgctcttgaagttccacatatacaaactcgctggaaacacccctcggtg
gacaacaaagacttgttttacatcaacctctacccggattacgcggccatcagcagagcg
gtcctggatctggtcctctactacaactggaaaacagtgactgtggtgtatgaagacagc
acaggtctaattcgtctgcaagagctcatcaaagctccctccagatataacattaaaatc
aaaatccgccagctgccctctgggaataaagatgccaagcctttactcaaggagatgaag
aaaggcaaggagttctatgtgatatttgattgttcacatgaaacagccgctgaaatcctt
aagcagatcctgttcatgggcatgatgactgagtattatcattactttttcacaaccctg
gacttatttgctttagatctggaactctacaggtacagcggtgtaaatatgaccgggttt
cggctgctcaatattgacaaccctcacgtgtcatccatcattgacaagtggtccatggag
aggttgcaggccccgcccaggcccgagaccggccttttggatggcatgatgacaactgaa
gctgctctgatgtatgatgctgtgtacatggtggccattgcctcccaccgggcttcccag
ctaaccgtcagctccctacagtgccatcgacacaagccatggcgccttggacccagattt
atgaacctgatcaaagaggctcaatgggatggcttgactgggcgtatcaccttcaataaa
accgatggcttgaggaaggattttgatctggacattattagtctcaaagaggaaggaact
gaaaaggctgctggcgaagtatctaaacacttatataaagtgtggaagaagattgggatt
tggaactccaacagtgggcttaacatgacggatggcaacaaagacaggtccaataatatc
actgattcactggccaaccgaacactcatcgtcaccacaattctggaagaaccctacgtg
atgtacaggaaatctgataagcccctgtatggaaatgacagatttgaaggctattgctta
gacctattgaaggaattgtcaaacatcctgggtttcatttatgatgttaaactcgttcct
gatggcaaatatggagctcagaatgataaaggagagtggaatggaatggtcaaagaactt
attgatcacaaggctgatctggcggtggctcctcttaccatcacctacgtgagggagaaa
gtcatcgatttctccaagcccttcatgaccctgggcatcagcattctctaccggaagccc
aatggcaccaatccaggcgtcttctccttcctcaaccccttgtctcctgacatatggatg
tatgtgctcttagcctgcttaggagtcagttgtgtcctctttgtgatcgcaaggtttaca
ccttacgagtggtataacccccacccatgcaaccctgactcagacgtggtggaaaacaat
tttactttactaaatagtttctggtttggagttggagctctcatgcaacaaggatcagag
ttgatgcccaaagctctctcaaccagaatagttggagggatatggtggtttttcacccta
atcatcatttcatcctacactgccaatctggctgccttcttgacagtagagcgaatggaa
tcccccattgattcagcagatgatctggcaaagcaaaccaagatagaatatggggcagtc
agagatggatcaacaatgaccttcttcaagaaatcaaagatatccacctacgagaagatg
tgggctttcatgagcagcaggcaacagactgccctggtcaaaaacagtgacgaagggatt
cagcgagtgctcaccactgactatgccctgctgatggagtccaccagcattgagtatgtg
acccagagaaactgcaacctcacgcagattgggggcctcattgactccaaaggttatgga
gtgggaacgcctatcggctctccttaccgggataaaattactattgctattcttcaatta
caagaagaggggaaactgcatatgatgaaggagaagtggtggcggggaaatggctgcccc
gaggaagacaacaaagaggccagtgccctgggagtggaaaatattgggggcatcttcatt
gttctggctgctggactggtcctttctgtatttgtagccattggtgaatttatatacaaa
tcacggaagaacaacgatatcgaacaggctttttgtttcttttatggactgcaatgtaag
caaacccatccaaccaactctacttctggaaccactttatctacggatttagaatgtggc
aaattaattcgagaggagagagggattcagactcagtcctcagttcacactgtgtaa
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