Sus scrofa (pig): 100624579
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Entry
100624579 CDS
T01009
Symbol
PLXNA1
Name
(RefSeq) plexin-A1 isoform X1
KO
K06820
plexin A
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
ssc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100624579 (PLXNA1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100624579 (PLXNA1)
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Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
TIG
Plexin_RBD
TIG_plexin
Sema
TIG_2
PSI
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
100624579
NCBI-ProteinID:
XP_020925109
LinkDB
All DBs
Position
13:complement(73054434..73098786)
Genome browser
AA seq
1909 aa
AA seq
DB search
MYVPTGPERLGPGTQSIMPLASLSPRAPLPLLLLLLLGGTPRAGGGPQPPFRTFTASDWA
LTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGLGS
TDNVNKLLLLDQAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSGVREPGSMA
GVLIAGPPGQAQAKLFVGTPIDGKSEYFPTLSSRRLMANEEDAEMFGFVYQDEFVSSQLK
IPSDTLSKFPAFDIYYVYSFRSEHFVYYLTLQLDTQLTSPDAAGEHFFTSKIVRLCVDDP
KFYSYVEFPIGCEQAGVEYRLVQDAYLSRPGRALARQLGLAEDEDVLFTVFAQGQKNRVK
PPRESVLCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDDFCGQD
FNQPLGGTVTIEGTPLFVDKDDGLTAVAAYDYRGRTVVFVGTRSGRIRKILVDLANPGGR
PALAYESVVAQEGNPILRDLVLSPDRQYLYAMTEKQVTRVPVESCVQYTSCELCLGSRDP
HCGWCVLHSICSRQDACERADEPQRFAADLLQCVQLAVQPRNVSVTMSQVPLVLQAWNVP
DLSAGVNCSFEDFTESEGILEDGRIHCRSPSAREVAPITRGQGDQRVVKLYLKSKETGKK
FASVDFVFYNCSVHQSCLSCVNGSFPCHWCKYRHVCTHNAADCAFLEGRVNVSEDCPQIL
PSTQIYVPAGVVKPITLAARNLPQPQSGQRGYECLFHTPGSPARVAALRFNSSSLQCQNS
SYSYEGNDVSDLPVNLSVVWNGHFVIDNPQNIQGEPAHLYKCPALRESCGLCLKADPRFE
CGWCVAERRCSLRPHCPADFPAAWMHARHGSSRCADPKIFKLSPETGPRQGGTRLTITGE
NLGLRFEDVRLGVRVGKVLCSPVESEYISAEQIVCEIGDASTVRAHDALVEVCVRDCSPH
YRALSPKRFTFVTPTFYRVSPARGPLSGGTWIGIEGSHLNAGSDVAVSVGGRPCSFSWRN
SREIRCLTPPGQSPGSAPIVININRAQLTNPEVKYNYTEDPTILKIDPEWSINSGGTLLT
VTGTNLATVREPRIRAKYGGVERENSCLVYNDTTMVCRAPSVDNPARSPPELGERPDELG
FVMDDVRALLVLNTSSFLYYPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLN
YTVLIGSTPCALTVSETQLLCESPNLTGQHKVTVRAGGFEFSPGVLQVYSDSLLTLPAIV
GIGGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDI
HELTNDLDGAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTKKHF
LLTFIRTLEAQRSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPK
LLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYS
LSEDKLIRQQIDYKTLTLNCVNPENENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVPYSQ
RPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQTSA
YNISNSSTFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLDQRE
GDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQAD
QHQIHDADVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTS
EHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFN
SMSALHEIYSYISKYKDEILTALEKDEQARRQRLRSKLEQVVDTMALSS
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgcccacaggacctgagcgccttggccccgggacccagtccatcatgccactg
gcatctctgagccctcgggcaccactgccgctgctgctcctgctgctgctggggggcaca
ccccgggcaggcgggggtccacagccccctttccgcaccttcacggccagcgactgggcc
ctcacccacctggtggtccatgagcagacgggtgaggtgtatgtgggtgccgtgaaccgc
atctacaagctgtcagggaatctgacgctgctgcgtgcgcacgtgacaggccccgtggaa
gacaacgagaagtgctacccgccgcccagcgtgcagtcctgcccacacggcctgggcagc
accgacaatgtcaacaagctgctgctgctagatcaggctgccaaccgcctgctggcctgc
ggcagtgcctcacagggcatctgccagttcctgaggttggacgacctcttcaagctgggt
gagccacaccaccgcaaggagcactacctgtcgggtgtgcgcgagccgggcagcatggca
ggcgtgctgatcgccgggccgccaggccaggcgcaggccaagctcttcgtgggcacgccc
attgatggcaagtctgagtacttccccacgctgtccagccggcggctcatggccaatgag
gaggacgccgaaatgttcggcttcgtgtaccaggacgagttcgtgtcctcgcagctcaaa
atcccctcagacacgctgtccaagttcccagccttcgacatctactacgtgtatagcttc
cgcagcgagcacttcgtttactacctcaccctgcagctggacacgcagctcacctcgcct
gacgctgccggcgagcacttcttcacgtccaagatcgtgcggctgtgcgtggacgacccc
aagttctactcctatgtcgagttccccatcggctgtgagcaggcaggagtggagtaccgc
ctggtgcaggatgcctacctgagccggcccggtcgcgccctggcccgccagctgggcctg
gctgaggatgaggacgtgctgttcaccgtgttcgcccagggccagaagaaccgtgtgaag
ccgccccgggagtcagtcctgtgcctcttcacactcagggccatcaaggagaagatcaag
gagcgcatccagtcctgctaccgtggggagggcaagctctcgctgccctggctgctcaac
aaggagctgggctgcatcaactcgcccctgcagattgacgacgacttctgtgggcaagac
ttcaaccagccactgggtggcacagtcaccatcgagggtacgcccctgttcgtggacaag
gatgatggcctgaccgccgtggccgcctacgactatcggggccgcactgtggtgttcgtg
ggcacacgaagcggccgcatccgcaagatcctcgtggacctggcgaacccaggaggccgg
ccagccctggcctacgagagcgtagtggcccaagagggcaaccccatcctgcgtgacctg
gtcctcagcccagaccgccagtacctctacgccatgacggagaagcaggtgacccgcgtg
cctgtggaaagctgcgtgcagtacacgtcctgtgagctgtgcctggggtcacgggacccc
cactgcggctggtgtgtcctgcacagcatctgctcacgtcaggatgcctgtgagcgggcg
gacgagccccagcgcttcgctgcggacctgctacagtgtgtgcaattggccgtgcagcca
cgcaatgtgtctgtcactatgtcccaggttccgctcgtgctgcaggcctggaatgtacct
gacctctcggctggagtcaactgctcctttgaggacttcaccgaatctgagggcatcctg
gaggacggccggatccactgccgctccccctccgcacgggaggtggcgcccatcacgcgg
ggccagggagaccagcgggtggtcaagctgtacctaaagtccaaggagacgggcaagaag
tttgcgtccgtggacttcgtcttctacaactgcagcgtccaccagtcctgtctgtcctgc
gtcaacggctccttcccctgccactggtgcaagtaccgccacgtgtgcactcacaacgcc
gccgactgtgccttcctggagggccgcgtcaatgtgtctgaggattgcccgcagatcctg
ccctccacccagatctatgtgccagcgggtgtggtgaagcccatcaccctggctgctcgg
aatctgccacagccacagtcgggccagcgtgggtacgagtgcctgttccacaccccaggg
agcccggcccgtgttgctgccctgcgcttcaacagctcaagcctgcagtgccagaactcg
tcgtactcctacgagggcaatgatgtcagtgacctgcccgtgaacctgtctgtggtgtgg
aatggccacttcgtcattgacaacccgcagaacatccagggtgagccagcccacctgtac
aagtgcccggcactgcgggaaagctgcggcctctgcctcaaggccgaccctcgctttgag
tgtggctggtgtgtggccgagcgccgctgctccctgcgcccccactgtcctgcagacttt
cccgctgcctggatgcacgcgcgccatggcagcagccgctgcgcggaccccaagatcttc
aagctgtcccctgagacaggcccacggcagggcggcacacggctcaccatcacgggcgag
aacctagggctgcgctttgaggacgtgcggctgggtgtgcgcgtgggcaaggtgctatgc
agccccgtggagagcgagtacatcagtgctgaacagatcgtctgtgaaatcggagatgcc
agcaccgtccgggcccatgacgccctggtggaggtttgcgtgcgggactgctccccccac
taccgggccctgtcgcccaaacgcttcacctttgtgactccaactttctaccgtgtgagc
cctgcccgcgggcccctttcggggggcacctggattggcatcgagggtagccacctgaac
gcaggcagtgacgtggctgtgtctgttggcggccggccctgctcattctcctggaggaat
tcccgggagatccggtgcctgacaccccctgggcagagccctggcagtgcccccatcgtc
atcaatatcaaccgtgctcagctcaccaatcctgaggtcaagtacaactacacagaggac
cccactatcctgaagattgatcccgagtggagcatcaacagtggagggaccctcctaaca
gtcacaggcactaatctggccactgtccgtgaaccccgcatccgggccaagtatggaggc
gtcgagagggagaacagctgcctggtgtacaacgacaccaccatggtgtgccgggcccca
tcggtggacaaccccgcccgcagcccgcctgagctgggggagcggcccgacgagctgggc
ttcgtcatggacgacgtgcgcgccctgctcgtgctcaacacctcatctttcctctactac
ccggaccctgtgttggagccgctcagccccacgggccttctggagctgaaacccagctcc
cccctcatcctcaagggccgcaacctcctgccgccagcacctggcaactcccggctcaac
tatacagtgctcatcggctccacgccctgtgccctcaccgtttcagagactcagctgctc
tgcgagtcacccaacctcaccgggcagcacaaggtcacggtccgggccggtggcttcgag
ttctcgccaggggtgctgcaggtgtactcggacagcttgctgacgctgcctgccattgtg
ggcatcggcgggggcgggggcctcctactgctggtcattgtggctgtgctcatcgcctat
aagcgcaaatcacgggacgctgaccgcaccctcaagcgcctgcagctccagatggacaac
ctggaatcccgcgtggcccttgagtgcaaggaagcctttgcagagctgcagacagacatc
catgagctgaccaacgacctggatggcgcaggcatccccttcctcgactaccggacgtat
gccatgcgtgtgcttttccctgggattgaggaccacccggtgctcaaggagatggaggtg
caggccaatgtggagaagtcgttgacactgttcgggcagctgctgaccaagaagcacttc
ctgctgaccttcatccgcaccctggaggcccagcgcagcttctccatgcgcgaccgtggc
aacgtggcctcgctcatcatgacagccctgcagggcgagatggagtatgcgacgggagtg
ctcaagcagttgctgtccgacctcatcgagaagaacctggagagcaagaaccaccccaag
ctgctgctgcggcggactgagtcggtggcagagaagatgctgactaactggttcaccttc
cttctgtacaagttcctcaaggagtgcgcgggggagcctctctttatgctctactgcgcc
atcaagcagcagatggagaagggccccatcgatgccatcacgggtgaggcgcgctactcc
ctgagcgaggacaagctcatccggcagcagatcgactacaagacactgaccctgaactgc
gtgaatcctgagaacgagaatgcgcctgaggtgccggtgaaggggctgaactgcgacaca
gtgacacaagtcaaggagaagctgctggatgccgtgtacaagggcgtcccctactctcag
aggcccaaggccggggacatggacctggagtggcgccagggtcgcatggcccgcatcatc
ctgcaggacgaggacgtcaccaccaagatagataatgactggaagaggctcaacacactg
gcccactaccaggtgactgacgggtcctcggtggccttagtgcccaagcagacgtccgcc
tacaacatctccaactcgtccaccttcaccaagtccctcagcagatacgagagcatgctc
cgcacggccagcagcccggacagcctgcgctcccgcacgcccatgatcacgcccgacctg
gagagtggcaccaagttgtggcacctggtcaagaaccacgaccacctggaccagcgtgag
ggcgaccgtggcagcaagatggtctcagagatctacctgactcggctgctggccaccaag
ggcacgctgcagaagttcgtggacgacctcttcgagaccatcttcagcactgcacaccgg
ggctctgccctgccgctggccatcaaatacatgttcgacttcctggacgagcaggctgac
cagcaccagatacacgacgcagatgtgcgccacacctggaagagcaactgcctgcccctg
cgcttttgggtgaacgtgatcaagaacccgcagtttgtgttcgacatccacaagagcagc
atcacagacgcctgcctgtcagtggtggcccagaccttcatggactcctgctccacatca
gagcacaagctgggcaaggactcgccctccaacaaattgctctacgccaaggacatcccc
aattacaagagctgggtggagaggtactatgctgacattgccaagatgcctgccatcagc
gaccaggacatgagtgcgtacctggccgagcagtcacggctacacctgagccagttcaac
agcatgagtgccctgcacgagatctactcttacatcagcaagtacaaagatgagatcctg
acggccctggagaaggatgaacaggcccggcggcagcggctccggagcaagttggagcag
gtggtggacaccatggccttgagcagctga
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integrated database retrieval system
