Sus scrofa (pig): 100624660
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Entry
100624660 CDS
T01009
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100624660 (SH3TC2)
Membrane trafficking [BR:
ssc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100624660 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
TPR_12
SH3_1
SH3_9
SNAP
TPR_1
TPR_MalT
TPR_2
COP9_hel_rpt
Motif
Other DBs
NCBI-GeneID:
100624660
NCBI-ProteinID:
XP_020940640
Ensembl:
ENSSSCG00000023279
ENSSSCG00000024006
LinkDB
All DBs
Position
2:complement(150183480..150247747)
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AA seq
1325 aa
AA seq
DB search
MCQGGGRGGTPLGGCPLPVLLGWCSQGPWPWEDGAHMGGCFCIPGEPSPSWGLGKETPSK
DPTISSEFIPSSENKEKCFLSQNMTTDLTLSFSVKSRSRRCVNGPLQEAARRRLWALENE
DQEVRALFKDLSARLVGVQSQKAQFLITFKTVEEVWKFSTYLSLGYVSACLEHLLFDHRF
WLNCRLVEDTEIQVSVDDKHLERIYLGLLIQEGHFFCRAMCSVAQPTEKEGEYLTLCKNE
LISVKVAEGESEWEGVSLVTGQRGLVPVSAVEPLPLPFHQWFLKNYPGSCGLSRRRDWTG
SHQIGRGKCKAWKAYESEEKDELSFHQGESIEIIGFVIPGLQWFIGRSALTGEVGFVPTR
HVDPDSYSPVSKHSAFFSDEERCSLGVLGSDRTTECASFLHALAQTDIASVYRLSGFESI
PNLPNDLSESQPEGFRETRPGGSWEQHQALGSRPSSSSEDSSLDEELLSAASDTYHLPEP
GDLSDPELLMDLNTGQEEGEAENLAPILAFLDHAGYAEHLKSLYDVPFSFLTSSFHSYSE
EDELVAYLEASRKWAKRSHKTWAHARLCFLLGRLSARKVKLSQARVYFEEAVCVLSGAFE
DLPLAAALYINLAAIYLRQRLRHKGSALLEKAGALLACLPDRECSAKSELDVVAYVLRQG
IVSGSCPLEARACFLAIRLLLSSGQHEEVLPFAERLQLLSGRPPASDATAAVLSFLYDKK
YLPHLAVASVRQRGPQSAQGVALPIWQVHLVLQNSTRLLGVPASVWGDVSALSCPALRQA
LAACEEEVDRSTQRALCLILSKVYLQHRSPDGAIRYLSQAVMLGRLLSEHEAFESSLCLA
WACLLASQAKKALDILEPLLHHLEEAERAPQEGVVHNLLGLALQGEGCVHKAAKSYLRAL
NRAQEAGDVRNQAVALANLGHLSLKSWTPQPARDHLLQAVQLYAQLQASMETDMELVQVL
LWLAQVQVRGSRLASGRVCYEMALLFGLKHRHLKSQLQVTKSLCHFYSSVCPNPEACITY
HEHWLTLAQQLRDREMEGRLLESLGQLYRNLNTARSLRKSLTCIKESLRIFIDLGERDKA
AEAWLGAGRLHYLMQEDELVELYLQAAVQKALKSEEPSLALRLYEEAGDVFFNGTRHRHR
AVEYYRTGAIPLARRMKAVRTELRIFNKLTELQISLEGYEKALEFATLAARLSTVAGDRR
QELVAFHRLATVYHSLHMYEMAEDCYLKTLSLCPPWLQSPKEALYYAKVYYRLGRLTFDQ
LKDAHDATEYFGLALAAAVLLGDEELQDAIRTRLDSICRSSLWHSSPSGHSSERARWLSG
GGLAL
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtgccagggaggaggcagaggagggacaccgctgggaggctgtcccctcccagtgctc
ttaggctggtgttcccaggggccttggccctgggaggatggtgcacacatgggtggctgc
ttctgcatccccggggagccgagtccgtcctggggcctaggtaaagaaactccttccaag
gatccaaccatatcgagtgagtttataccctcatctgaaaacaaggaaaaatgtttcctg
tcacagaacatgactacagacctgaccctttccttcagcgtgaagagccgctcccggagg
tgtgtcaacggccccctgcaggaagccgcgaggaggcggctctgggcgctcgagaatgag
gaccaggaggtgcgcgcgttgtttaaggacctctcggccaggctggtgggggttcagtcc
cagaaggcccagttcctcatcaccttcaagaccgtggaggaagtctggaagttctccacc
tacctgagcttgggctacgtatctgcgtgtttggagcatctcctctttgaccacagattc
tggctcaactgccgattggtggaggatacagagatccaagtgtccgtcgatgataaacat
ctggaacgcatatacctgggacttctgatccaagaaggtcatttcttctgcagagccatg
tgctctgtggctcagccaactgagaaggaaggggagtatttgacactttgcaagaatgag
ttaatctcggtgaaggtagctgaaggcgagtccgagtgggaaggtgtgtccttggtgacg
ggtcagcggggcttggtgccagtgtcggctgtggagccccttcctctccctttccatcag
tggttcctgaagaattatccgggaagctgtggcctttccaggaggagggattggacaggc
tcccatcagattggtagagggaaatgtaaggcctggaaggcatatgagagcgaagaaaag
gatgaactgagtttccatcagggagagagcattgagatcatcggcttcgtcatccctggg
ctccagtggttcatcgggaggtcagcgcttacaggagaagtgggctttgtccccacccgg
cacgtcgatcctgattcttactccccagtgagcaagcactctgcctttttcagtgatgag
gagagatgctctctgggggtcctgggaagtgacaggacaactgagtgtgccagcttcctc
cacgcgcttgctcagactgacatcgcgtctgtctaccggcttagtgggtttgaatcaatc
ccgaatcttccaaatgatctgagtgagtcccagcctgaaggcttccgagagacccggcct
ggtggatcctgggagcagcatcaggccctgggctccagaccttccagcagctccgaggac
tccagcctggacgaggagctgctgtccgctgcctcagacacataccacctgccggagccc
ggtgacctcagtgacccggagctgctcatggacctgaacaccggtcaggaggagggggag
gctgagaacttggctcccatcctggcttttctggatcacgcgggctacgccgagcacttg
aagagcctctacgacgttcctttttccttcctcacatcttcgtttcacagctactctgag
gaggacgagctggtggcctacctggaagcttcgaggaagtgggccaagcggagccacaag
acctgggctcacgcccggctctgcttcctcctgggccggctgagcgccaggaaggtcaag
ctctcccaggccagggtgtactttgaggaggccgtctgtgtgctcagcggggcattcgag
gacctgcccttggcggccgccctgtacatcaatttggcagccatctacctgaggcagagg
ctgaggcataaaggctcggccctgctcgagaaggcaggtgccctgttggcctgcctgcct
gaccgtgagtgtagtgccaagagcgagctggacgtggtggcctatgtgctgagacagggc
atcgtgtcaggcagctgtcccctggaggccagggcctgcttcctggccatccgattgctc
ctaagctctggacagcatgaggaggtcctgccttttgccgagcgcctgcagctgctctct
ggccgcccccctgcttcggatgccacagccgccgtcttgagttttctctatgacaagaaa
tacctgccacaccttgcagtggcctctgtccggcagcgtggtcctcagagtgcccaaggg
gtggcccttccaatttggcaggtgcatctggtcctccagaacagcaccaggctcctcggc
gtccctgcttcggtctggggtgacgtttccgccctgtcctgcccggcactcaggcaggcg
ctggctgcctgtgaggaggaggtggatcggagcacccagagggccctgtgtctcatcctg
tccaaagtgtacctccagcacaggtcccctgatggtgccatccgctacctgagccaagcc
gtgatgctaggccggctgctgagtgagcacgaagcttttgagtcctccctctgcttggcg
tgggcctgtctcttggccagccaggcaaagaaggctttggacatcctcgagccgctctta
caccacctggaagaggcagagagggcgccccaggagggcgtggtccacaacctcctggga
cttgctcttcaaggtgaaggctgcgtgcacaaggcagccaagagctatctccgggccttg
aacagagcccaggaggcgggggacgtgcgtaaccaggcggtggctttggctaaccttggt
catctgagcctgaagtcctggactccgcagccagccagggaccatcttctgcaggccgtg
cagctctatgctcagctccaagccagcatggagacagacatggaattagtacaggtgctt
ctctggttggcccaggtccaggtgcgtggaagccggctggccagcggccgcgtgtgttat
gaaatggcactgctgtttggcttaaagcatcgacacctgaagagtcagcttcaggtcacc
aaatccctctgccatttctacagctctgtgtgcccaaaccctgaggcatgcatcacctac
catgagcactggctgaccctggctcagcagctcagggaccgggagatggaggggaggctg
ctggagtcccttggacagctctaccggaacctaaacacagccaggtccctcaggaagtcc
ctcacctgcatcaaggagagcctgcggatcttcattgacctgggggagagagacaaggct
gccgaggcctggcttggggctggccgactccactatctcatgcaggaggacgagctggtg
gagctgtatctgcaggcagccgtccagaaagccctgaagtcagaggagccctccctggcg
ctcaggctctatgaggaagcgggcgatgtgttcttcaatgggacccgccacaggcaccga
gccgtggagtattaccgaactggggctattcccttagcaaggaggatgaaggccgtgaga
acggagctccggattttcaacaagttgacagagctgcagatcagcctggaaggctatgag
aaggctttggaatttgccaccttagcagccaggctcagcaccgttgcaggggatcggagg
caggaactggtggccttccaccgtctggctactgtgtaccactctctgcacatgtatgag
atggctgaggactgctacctgaagactctgtccctctgcccaccctggctgcaaagcccc
aaggaggccttatactatgccaaggtctattatcgtctgggccgactcacttttgaccag
ctgaaggatgcccacgatgccactgaatacttcgggctggccctggctgcagcggtcctg
ctgggtgacgaggagctgcaggatgccatcaggaccaggctggacagcatctgccggagc
tcgctgtggcacagcagcccctctgggcattcctcagagagggcgcggtggctgagcggt
gggggcctggccctctga
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