Sus scrofa (pig): 100624749
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Entry
100624749 CDS
T01009
Symbol
PDLIM7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100624749 (PDLIM7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100624749 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
100624749 (PDLIM7)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Zn_Ribbon_TF
PDZ_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
100624749
NCBI-ProteinID:
XP_020940035
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Position
2:80453013..80472660
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AA seq
517 aa
AA seq
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MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGG
LTHIEAQNKIRACGERLSLGLSRAQPAQSKPQKALAPAADPPRYTFVPSASLNKTARPFG
APPPADNAPQQNGCRPLTSQQPLRPLVPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHL
TGTEFMQDPDEEHLKKSSQVPRTEAPAPASATPQEPWPGEREWAWLWAWGRVGNFQGDGG
GLLQVGPGYPPRPVVGSLGTPPGATFLALAGPPTPSPTSRPPWAVDPAFAERYAPDKTST
VLTRHTQPATPTPMQNRTSIVQAAAGGGPGGGSGSNGKTPVCHQCHKVIRGRYLVALGHA
YHPEEFVCSQCGKVLEEGGFFEEKGSIFCPPCYDVRYAPSCAKCKKKITGEIMHALKMTW
HVHCFTCAACKTPIRNRAFYMEEGVPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFS
WHDTCFVCAICQINLEGKTFYSKKDKPLCKSHAFSHV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggattccttcaaggtggtgctggaggggccagcaccttggggcttccggctgcagggg
ggcaaggacttcaatgtgcccctctccatctcccggctcactcctggaggtaaagctgca
caggccggtgtggcagtaggtgactgggtgctgagcatcgatggcgagaatgcaggaggc
ctcacacacatcgaagcccagaataagatccgtgcctgcggggagcgcctcagcctgggt
ctcagcagggcccagccagcacagagtaaaccgcagaaggccctggcccctgccgcggac
cccccgcggtacacctttgtacccagcgcctccctcaacaagacggcccgccccttcggg
gcgcccccgcccgctgacaacgccccgcagcagaatgggtgcagacccctgacaagtcaa
cagccgctccgaccgctggtcccagatgccagcaagcagcggctgatggaggacacggag
gactggcggccgcggcctgggacaggccagtcccgttccttccgcatcctcgcccacctc
acgggcaccgagttcatgcaagacccggatgaggagcacctgaaaaaatcaagccaggtg
cccaggacagaagccccagccccagcctcagctacaccccaggaaccctggcctggtgag
agagagtgggcttggctttgggcctggggaagggtgggtaacttccagggggacgggggt
gggctcctccaagttggcccaggctatccccctcgtcctgtggtggggtccctgggcaca
ccccctggagccactttcctggccttggcaggccctcccacccccagccctaccagccgc
ccaccttgggctgtggaccctgcatttgctgagcgctatgccccggacaagaccagcacg
gtgctgacccggcacacccagccagccacacccacgcctatgcagaaccgcacctccatt
gtgcaggccgctgctggagggggccctggagggggcagcggcagtaatgggaagactccc
gtgtgccaccagtgccacaaagtcatccggggccgttacctggtggccctgggccacgcg
taccaccccgaggagtttgtgtgcagccagtgtggaaaggtcctggaagagggtggcttc
ttcgaggagaagggctccatcttctgcccgccctgctatgatgtgcgctatgcaccaagc
tgtgccaagtgcaagaagaagatcacaggcgagatcatgcatgccctgaagatgacctgg
cacgtgcattgcttcacctgcgcagcttgcaagacacccattcggaacagggccttctac
atggaggaaggggtgccctactgcgagcgagactatgagaagatgtttggcacaaaatgc
cgaggctgtgacttcaagatcgatgccggggaccgcttcctggaggcgctgggcttcagc
tggcatgacacatgctttgtgtgcgcgatatgtcagatcaacctggaaggaaagactttc
tactccaagaaggacaagcccctttgcaagagccacgccttctcccatgtgtga
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