Sus scrofa (pig): 100624755
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Entry
100624755 CDS
T01009
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100624755 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100624755 (NFRKB)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
100624755 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
100624755
NCBI-ProteinID:
XP_020918803
Ensembl:
ENSSSCG00000015242
ENSSSCG00000021545
LinkDB
All DBs
Position
9:complement(56616865..56656068)
Genome browser
AA seq
1311 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQREHLQQFLPHFPEDSIQQQSQLILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLSSQQQYFHRLLKQILASRNDLLEMARRSGPAFPSRQKRPSPSRT
PEEREWRTQQRYLKVLREVKEECGDTALSSDEEAALDLQEKFSFEDLSSWLPSSPARSPS
PAVPLRVVPTLATTDMKTADKIELGDSDLKIMLKKHHEKRKHQPDHPDLLTGDLTLSDIM
TRVNAGRKGSLAALYDLAVLKKRVKEKEEKKKKKIKMIKSEAEDLAEPLSGTEGLPPLSQ
APSPLAIPAIKEEPLEDLKPCLGINEISSSFFSLLLEILLLEGQASLPMLEERVLDWQSS
PASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNE
KELAALFQLWLETKDQAFCKENEDSSDATTPVPRVRTDYVVRPSTGEEKRVFQEQERYRY
SQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAAR
LPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIY
LHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSSKESSMKVLGGGPSEQSQMS
LSDSSMPPTPVTPVTPTTPALPTTPISPPPVPSVSKSGPTPVSEPAKSSSGVLLVSSPTM
PQLGTMLSPASGQTPPSSQATARVVSHSGSAGLPQVRVVAQPSLPAVTQQSAGPVLPQMP
AGPQIRVPATATQTKVVPQTVMATVPVKAQTAAAAVQRPGPGPAGLTVTSLPASANPASK
PATSSPGSSAPSAPTAAVIQNVTGQNIIKQVAITGQLGVKPQASSSIPLTATNFRIQGKD
VLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGGGTAGKGISATLH
VTSTPVHAADSPAKASPASASSSTPAGTTVVKVTPDLKPTEASSSAFRLMPALGVSVADQ
KGKSTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVASGSGTVHTSAVSL
PSVNAAVSKTVAVASGAANTPISIGAGAPAVRQVPVSTTVVSTSQAVSNGKLPARITVPL
SVISQPMKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQ
QLQQQGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggaccacatgctgacagatcccttggaactgggcccgtgtggcgatgga
catggcactcggatcatggaggactgcctcctggggggcactagggtcagcctgcctgag
gaccttctggaggatcccgagatattctttgatgtagtcagcctctcaacgtggcaggaa
gtactgagtgactcccagcgtgagcacctccagcagttcctgccccactttcctgaagac
agtatccagcagcaaagtcagctcatcctcgccctcttcagcggggagaacttccgcttt
ggaaaccctctgcacattgcccagaagcttttccgagatggacatttcaacccggaggtg
gtcaagtaccggcagctgtgcttcaagtcgcagtacaagcgctacctcagctcccagcag
cagtacttccaccggctgctgaagcagatcctggcctcccggaatgacctcctggagatg
gcccggcggagtggtcctgccttcccctccaggcagaagcggccctcaccatcccgcacc
cctgaggagcgggagtggcggacccagcagcgctacttgaaggtcctgcgggaggtgaag
gaggagtgtggggacacagccttatcgtctgatgaggaagccgcgttggatttacaagaa
aaattttcttttgaagatctcagctcatggcttccgagctctccagcacgctctcctagc
cctgcggtgcccctgcgggtggtgcccacgcttgccaccaccgacatgaaaaccgcagat
aaaatagagctgggggacagtgacctgaagataatgttaaagaagcaccatgagaagcgg
aagcatcagccagatcacccggacctcttgacgggggacctgactctcagtgacatcatg
acacgagtaaatgccggcaggaagggctccctcgcagccctgtatgacttggctgtcctt
aaaaaaagagttaaagaaaaagaggaaaagaagaagaagaaaataaaaatgatcaagtca
gaggcagaggatctggctgaaccgctaagtggtactgaagggctccctccgctctcacag
gctccatctccactggccatacctgccatcaaggaggagcctcttgaagacctcaagcca
tgtcttggaatcaatgaaatatcttccagcttcttctctcttctcctggagatcttgctg
ctagaggggcaggctagccttcctatgctagaagagcgcgttttggactggcagtcatca
cccgccagctccctcaatagctggttttctgcagcccccaactgggcggagttggtgtta
ccagccctgcagtatcttgctggggaaagccgtgctgtaccttccagcttctctcctttt
gttgaattcaaagagaagacccagcaatggaaattgcttggccagtcccaagataatgaa
aaggaattagctgcacttttccagctatggctggaaaccaaagaccaggccttctgtaag
gaaaatgaagacagctcagatgccacgacgcctgttcctcgggtaagaactgactatgtg
gtgcggcccagcacgggagaggagaagcgcgtttttcaggagcaggagcgttacaggtac
agccagccccacaaggccttcaccttccgcatgcacggcttcgagtccgtggtggggccc
gtgaagggcgtgtttgacaaggagacctcgctcaacaaagctcgagagcactcgctgctc
cgctctgaccggccagcctacgtcaccatcctgtccctggttcgtgatgcggcggcgcgg
ctgcccaacggggagggcacgcgggcggagatctgcgagctgctcaaggactcccagttc
ctggcgcccgatgtcaccagcactcaggtgaacacagtggtgagcggtgccctggatcgg
ctgcattacgagaaggacccgtgcgtgaagtacgacattggccggaagctgtggatctac
ctgcatcgtgaccgaagcgaggaagagtttgagcggatccaccaagcccaggcagctgct
gctaaagccagaaaagcccttcaacaaaaacccaagcccccatccaaggtgaagtccagc
agcaaggagagttccatgaaggtccttggcggtggcccttctgagcagagccagatgagc
ctcagtgactccagcatgcctcccacccctgtcactcccgtgacccccaccactccggct
ttgcccaccacccctatctcccctccgcctgtgccatcagtgagcaaaagtggccccact
ccagtctcagaaccagcgaaatctagttcaggtgttcttcttgtgtcttcaccaacaatg
ccgcagctggggacaatgctttccccggcctccggccagactccaccaagttcccaggcc
acggcccgtgttgtgagccactctggctcggcagggctcccccaggtgcgggtggtggcc
cagcccagccttcctgccgtcactcagcagtcagcagggccagtgctgccacagatgcca
gcaggaccccagatccgcgttccggccactgccacacagaccaaggtcgtgccccagaca
gtaatggccaccgttccagtcaaagctcagacggcagcagctgcggtgcagcggcctggc
cccgggccggcggggctcacggtgaccagtctccctgcctccgccaaccctgcaagcaaa
ccagctaccagctctcccgggagctcggctccgagtgcccccacggctgccgtcattcag
aacgtcacaggacagaacattatcaagcaggtggcgatcactgggcagcttggcgtgaag
ccccaggcgagcagcagcatcccactcacagccactaacttccgtatccagggtaaggat
gttctgcgtctgccaccctcttccatcaccacggacgccaaaggccagacagttctgcga
attactccagacatgatggccacgttggccaagtcccaggtcaccacagtcaaactgacc
caggacctctttgggacaggaggtggcactgcaggcaaaggcatctctgctaccttacat
gtcacttccactccagtccatgccgctgacagccctgccaaggccagtccagccagtgcc
tcttcgtccactccagcagggaccactgtggtcaaagtgactcctgacctcaagccaaca
gaagcctcgagttctgctttccgcttgatgccagcactgggtgtgagtgtggcagaccag
aaggggaaaagcacagtggcctcttctgaggcaaaaccggctgccaccatccgcatcgtg
cagggcctgggcgtgatgcctcccaaggcaggccagaccatcacagtggctgctcacgcc
aagcaaggggcctccgtggccagcgggtctggaactgtccatacttccgcagtgtccttg
cccagcgtgaatgctgctgtgtccaagactgtggctgtggcttccggggctgccaatacc
cccatcagcatcggggcaggagcccccgccgtgcggcaggtccctgttagcaccacggtt
gtctccacgtcccaggccgtgagtaatgggaagttgcccgcacggatcacggttcccctg
tctgtcattagccagcccatgaagggcaagagtgtggtcacagcccccatcatcaaaggc
aacctcggggccaacctcagtgggctgggccgcaacatcatccttaccaccatgccagcg
ggtaccaagctcattgccggcaacaagccggtgagtttcctcactgctcagcagttgcag
cagcttcaacagcaaggtcaggccacacaggtgcgcatccagactgtccccgcatcccat
cttcaacagggaacagcctctggttcctccaaagcggtctccactgtcgtcgtgaccaca
gctccatctcctaaacaggcacctgagcagcagtga
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