Sus scrofa (pig): 100624923
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Entry
100624923 CDS
T01009
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X2
KO
K17925
sorting nexin-13
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100624923 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100624923 (SNX13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
100624923
NCBI-ProteinID:
XP_003357507
UniProt:
A0A4X1TF12
A0A8D1QR08
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All DBs
Position
9:complement(86964038..87087200)
Genome browser
AA seq
1153 aa
AA seq
DB search
MREGSFSTGHLPPCPRDAGGSQRHQCKSRPPPVLLHPRVSRPRRAAEEERPPQACTPAPR
WTQRWGVSELPSVPGRPVSPAAEPLKQAPSGSPAIRLRLLARRRYGDSHETPAAPAPANG
SARRGETRTSLFQDGGASVASSRAGGKPAKPSKAAARERTEGAVAAVGGGLGSFRCCYGC
CHAARLGRSSLPRGVIMLTETSLSIWGWGSLGIVLSLITFGPFVIFYLAFYILCFVGGGF
VVTLLFGKTNSEKYLEQCEHSFLPPTSTGIPKCLEEMKREARTIKIDRRLTGANIIDEPL
QQVIQFSLRDYVQYWYYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDD
FGTHLRVFRKAQQKITEKDDQVKGTAEDLIDTFFEVEVEMEKDVCRDLVCTSPKDEEGFL
RDLCEVLLYLLLPPGDFQNKTMRYFVREIIARGILLPLINQLSDPDYINQYIIWMIRDSN
CNYEAFMNIIKLSDNIGELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVC
DSRIQRLQSGKEINTVKLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWM
TVEGYRVTAQQQLEVLSSRQKDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYL
VAKLADTLNHEDPTPEIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSF
RGSDDGDGESFNGSPTGSINLSLDDLSNVSSDDSVQLHAYISDTGVCNDHGKTYALYAIT
VHRRNLNSEEMWKTYRRYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKK
DLNAYLQLLLTPEMMKASPALAHYVCDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVS
NAVKSLPDSLAEGMTKMSDNMGKMSERLGQDIRQSFFKVPPLIPKTDSDPEHCRVSAQLD
DTVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWM
TSPEQVADLVKRFRDAFWPNGILAESVPCRDKAIRMRTRVAGKTKLLSIMPDELKHIIGA
ETTRKGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQ
KLQTTQAPSLQKR
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagggaagtttttctactggacatctgccgccttgtccccgagacgcgggaggt
tcacagcgccatcagtgcaagtctcggccgccgccggtcttgctccaccccagggtcagc
cgaccccggcgtgcggcggaggaagagcggccgccgcaggcatgcacgcctgctcccagg
tggacccagcgctggggcgtttctgaactcccctcggtccccggtcggccagtgagccca
gcggcggaacccttgaagcaggcgcctagtggatctccggccatccgcctccgcctcctc
gcgcgccggcgctatggcgacagtcacgagacgccagctgccccggcgcccgccaatggg
agcgcacgtcgcggggagacgcggacgtcgctcttccaagatggcggcgcgtccgtcgcg
agcagccgggccggggggaagccagcgaagccgagtaaagccgccgcccgggagaggact
gaaggagctgtcgccgccgttggcggcggcttgggcagttttcgctgctgctacggctgt
tgccatgcggcgaggctagggaggagctcacttccccggggtgtaataatgttaacagag
acaagtctatccatatggggatggggaagccttggcattgtcctctctctgataacattt
ggaccctttgtaatattttatttggcattttatatcctctgctttgtgggtgggggtttt
gtggttactctcctgtttgggaaaaccaactcagagaagtacctagaacagtgtgaacac
tcatttcttcctccaacatcaacagggattcctaagtgcttagaagaaatgaaacgggaa
gccaggactataaagattgatagaagattgacaggtgccaatattattgatgagcctctc
cagcaagttatccagttttccttaagggattatgtccaatattggtattatacattaagt
gacgatgaatcttttcttcttgaaattaggcagactcttcaaaatgcactcattcagttt
gctactaggtcaaaagaaatagactggcaaccttattttactacacgcatcgtagatgat
tttggcacacacctaagagtattcagaaaggctcaacagaagataacagagaaagatgat
caagtgaaaggtacagcagaagatcttatagataccttctttgaagttgaagtagaaatg
gagaaggacgtttgccgtgatctagtgtgcacctctcccaaagatgaagaaggattccta
agggatttatgtgaggtcttattatatttattgctacctcctggagattttcagaacaag
accatgcgatactttgtcagggaaatcattgcacgaggaattcttcttccattaataaat
caactcagtgatcctgattatattaatcaatatatcatatggatgatccgtgattctaat
tgcaattatgaggcctttatgaacattattaaattgagtgacaatattggagagctagaa
gcagtcagagataaagcagcagaagaattacagtatctccgatctctagatacagctggt
gatgatatcaacactatcaaaaatcaaatcaatagcttattatttgtaaaaaaagtatgt
gactcaagaatacaacggttgcagtcaggcaaagaaataaatactgtgaaacttgcagca
aactttgggaaactttgcacagtccccctggacagcattcttgtagacaatgttgcacta
caattttttatggattacatgcagcaaactggaggtcaagcacatctcttcttctggatg
acagtggaagggtaccgcgttacagcccaacagcagctggaagttttatcaagtcggcag
aaagatggaaaacatcaaaccaaccaaaccaaaggtcttttaagagcagctgctgttgga
atttatgaacaatatttatcagaaaaggcgtctccaagggttactgttgatgactatttg
gtagcaaaactagcagatactttgaatcatgaagatccaactcctgaaatctttgatgac
attcaaaggaaggtatatgaattgatgctacgagacgaaagattttatccttccttcaga
cagaatgcactttatgtgcgtatgttagctgagctggatatgttaaaagatcctagtttc
agaggatcagatgatggggatggagaatcttttaatgggtctcctacaggaagcataaat
ttgtctttagatgacctttcaaatgtatcttctgatgactcagtacaacttcatgcttac
atttcagacactggcgtttgtaatgatcatggcaagacgtatgcattatatgccatcact
gtacaccggcgcaatctaaacagtgaggagatgtggaaaacctaccgtcgttatagtgac
ttccatgacttccacatgaggatcactgaacagtttgaaaatctatcaagcatattaaag
cttcctggtaaaaagacttttaataatatggatagagattttttagaaaagagaaaaaag
gatctaaatgcatatttgcagttactgttaactcctgagatgatgaaagcatctccagct
ttggctcactatgtgtgtgattttcttgagaacaaagcctacagtaaagggaaaggggat
tttgctcgcaagatggacacttttgtaaatccacttcgaaattctatgaggaatgtttca
aatgcagttaaatcccttcctgatagcttggcagagggaatgactaaaatgtcagacaac
atgggcaaaatgtcagaaagattaggtcaagacataaggcaatcatttttcaaggtgcct
cctttaattccgaagactgattcagatcctgaacattgtcgagtttcagctcaacttgat
gatactgtggatgacaatattccacttagggtaatgctgcttctcatggatgaagtattc
gacttaaaagagagaaatcagtggttgcgaaggaatatcaaaaatctacttcaacaactt
attagagccacatatggtgatactattaataggaaaatagttgaccatgttgattggatg
acctcacctgagcaagtagccgacttagtgaaacgtttcagagatgccttttggccaaat
ggcattttagcagagtctgttccatgcagagataaagctattcgaatgagaacaagagtt
gcaggaaaaactaagttactttccattatgccagatgaactgaagcacattattggggct
gagaccacacgaaagggtattcttcgtgtttttgaaatgtttcaacacaaccagttaaac
aggagaatggtttatgtctttttggaaggctttttggaaaccttatttccacagtataaa
ttccgtgaacttttcaacaaactgcattcacggtcaaagcagatgcagaaatataaacag
aaacttcagactactcaagcgccttctttacagaaaaggtga
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