Sus scrofa (pig): 100624924
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Entry
100624924 CDS
T01009
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00310
Lysine degradation
ssc00514
Other types of O-glycan biosynthesis
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100624924 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100624924 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100624924 (COLGALT2)
Enzymes [BR:
ssc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100624924 (COLGALT2)
Glycosyltransferases [BR:
ssc01003
]
O-Glycan biosynthesis
O-linked Gal type
100624924 (COLGALT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
100624924
NCBI-ProteinID:
XP_003482786
Ensembl:
ENSSSCG00000030217
UniProt:
A0A287BTA9
A0A4X1TTX4
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Position
9:complement(125149806..125291092)
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AA seq
626 aa
AA seq
DB search
MAARPAAPLAWALLLVSWALLRGGCRARFAAEADPEDDEEEAVVFPESSLQRPTVLVAIL
ARNAAHSLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEILREWLKNVQRAYHYVEWRP
MDEPESYPDEIGPKHWPGSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLSL
LMAENKTIVAPMLESRGLYSNFWCGITPQGFYKRTPDYLQIREWKRLGCFPVPMVHSTFL
IDLRKEASDKLMFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNTEHYGYLPIPLKPHQ
TLQEDLENLIHVQIEAMIDHPPMEPSQFVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML
RTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSI
WKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDDIDRVQLDWELIYIGRKRMQVKEPEK
AVPNVANLVEADYSYWTLGYVISLEGAQKLVGADPFGKMLPVDEFLPIMYNKHPVAEYME
HYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQGR
IHRNAKNTEALPPPASLDTAPSRDEL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgccccgccgcccccctggcctgggcgctgctgctcgtctcctgggctctg
ctccgtggcggctgcagggcgcgcttcgccgcggaggcggacccggaggacgacgaagag
gaggcagtggttttcccggagtcgtccctacagcgacccacggtgctggtggccatcctc
gcgcgcaacgctgcgcactcgctgccgcacttcctcggctgcctggagcggctggattac
cccaagagccggatggccatctgggcagccactgatcacaatgtggataacacaacagaa
atactcagggagtggttgaagaacgtacagagagcctatcactatgtggagtggaggcct
atggatgaacctgagtcttatcctgatgagattggaccaaagcactggcccggttcccgt
tttgcccatgtgatgaaactacgacaggcggcccttcgaactgcgagggaaaaatggtca
gactacattctgttcatagatgttgacaacttcctgacgaatccgcagaccctcagtcta
ttgatggcagaaaacaaaaccatcgtggcccccatgctggagtcccggggcctgtactcc
aatttctggtgcggaatcacacctcagggcttctataaacggactccagactatcttcag
attagggaatggaagaggttgggctgctttcccgttcccatggtccactccacgttccta
attgacctcaggaaggaagcgtctgacaagctgatgttctaccccccgcaccaggactat
acctggacctttgatgacatcatcgtctttgctttctccagcaggcaagcaggcatccag
atgtacctctgcaacacagagcactacggctacctgcccatccccctgaagccccatcag
acgctgcaggaggacctcgagaacctcatccatgtgcagatagaagcaatgatcgaccat
cctccaatggaaccatctcagtttgtctcagttgtccctaaatatccagacaagatggga
tttgatgagattttcatgattaacctcaagcgtagaaaggacaggcgggaccggatgtta
cgcacactctacgagcaggagattgaggtcaagattgtcgaggctgtggatggaaaggca
ctcaacacaagtcagctgaaggccctgaatatcgaaatgctgcctggatatcgagatccc
tactcttccaggcctctaaccaggggtgaaattggctgcttccttagccattactctatc
tggaaagaggtaattgaccgagagctggagaagactcttgttattgaggatgatgtgcgt
tttgaacatcagtttaagaaaaagctgatgaagctgatggatgacattgaccgtgttcag
ctggactgggaactgatttatattggtaggaagcggatgcaagtgaaggagccagagaaa
gccgtgcctaacgtggcaaacctggttgaggctgactattcctattggacgctgggctac
gtcatctctctagagggagcacagaagctggttggggccgatccttttgggaagatgcta
ccagtggatgagtttctgcccatcatgtacaacaagcatcctgttgctgagtacatggag
cactacgagtccagggacctgaaggccttctccgcagaacccttgctcatctacccgaca
cactacacaggccagccggggtatctgagtgacacggagacctccaccatctgggacaat
gagactgtggccaccgactgggacaggacacacgcctggaagtcccggaagcaaggccgc
atccaccgcaatgccaagaacacagaggccctgccaccgcccgcctctctggacaccgcg
ccctcgagagatgagctgtga
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