Sus scrofa (pig): 100625160
Help
Entry
100625160 CDS
T01009
Symbol
HCN2
Name
(RefSeq) LOW QUALITY PROTEIN: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04024
cAMP signaling pathway
ssc04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100625160 (HCN2)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100625160 (HCN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100625160 (HCN2)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100625160 (HCN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100625160
NCBI-ProteinID:
XP_020939964
LinkDB
All DBs
Position
2:complement(77708159..77730881)
Genome browser
AA seq
898 aa
AA seq
DB search
MDARGGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPSPAPPPQAPRTEA
APPEAADEGGPRARLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPAXG
PKVSFSCRGAASGPAPGPGPGPADEAGSEEAGPAGEPRGSQASFMQRQFGALLQPGVNKF
SLRMFGSQKAVEREQERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKD
ETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRTWFVVDFVSS
IPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTY
DLASAVMRICNLISMMLLLCHWDGCLQFLVPMLQDFPRNCWVSINGMVNHSWSELYSFAL
FKAMSHMLCIGYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQE
KYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDSILGELNGPLREEIVNFNCRKL
VASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE
MKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID
RLDRIGKKNSILLHKVQHDLNSGVFNNQENAIIQEIVKYDREMVQQAELGQRVGLFPPPP
PPQVTSAIATLQQAVAMSFCPQVARPLVGPLALGSPRLVRRPPPGPVSAAPSPGPAPTAS
PPGAPASPRAPRTSPYGGAPGSPAAPRAGPALPARRLSRASRPLSASQPSLPHGAPGPGP
TASARPASSSTPRLGPAPATRAAAPSPDRRDSASPSPGAASGGLDPLDSARSRLSSNL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcgcgggggcggcgggcggcccggggagagcccgggcgcgacccccgcgccg
gggccgccgccgccgccgccgcccgcgcccccccagcagcagccgccgccgccgccaccg
cccgcgccccctccgggccccagcccagcgccccctccgcaggcgccccggacagaggcg
gctcccccggaggcggcggacgagggcggcccgcgggcccggctccgcagccgcgacagc
tcgtgcggccgcccgggcaccccgggcgcggcgagcacggccaagggcagcccgaatggc
gagtgcgggcgcggcgagccgcagtgcagccccgcggggcccgagggcccggcgncgggg
cccaaggtgtcgttttcgtgccgcggagcggcctcagggcccgctccgggcccggggccg
gggccggcggacgaggcgggcagcgaggaggcgggcccggctggggagccgcgcggcagt
caggccagcttcatgcagcgccagttcggcgcgctccttcagccgggcgtcaacaagttc
tcgctgcggatgttcggcagccagaaggccgtggagcgggagcaggagcgcgtcaagtca
gcgggggcctggatcatccacccgtacagcgacttcaggttctactgggacttcaccatg
ctgctcttcatggtgggaaacctcatcatcatccccgtgggcatcaccttcttcaaggat
gagaccacggccccatggattgtgttcaacgtggtctcagacacattcttcctcatggac
ctggtgctcaacttccgcacgggcatcgtgattgaggacaacacggagatcatcctggat
cccgagaagatcaagaagaagtacctgcgcacgtggttcgtagtggattttgtgtcctcc
atccccgtggactacatcttcctcattgtggagaagggcatcgactccgaggtctacaag
acagcacgcgccctgcgcatcgtgcgcttcaccaagatcctcagcctgctgcgcctgctc
cgcctgtcgcgcctcattcgctacatccatcagtgggaggagatcttccacatgacctat
gacctggccagcgcggtcatgcgcatctgcaacctcatcagcatgatgctgctcctgtgc
cactgggatggctgcctgcagttcctggtgccgatgctgcaggacttcccgcgcaactgc
tgggtctccatcaacgggatggtgaaccactcgtggagcgagctctactccttcgcactc
ttcaaggccatgagccacatgctgtgcatcgggtacgggcggcaggcaccggagagcatg
acagacatctggctgacgatgctgagcatgatcgtgggcgccacctgctatgccatgttc
atcggccatgctaccgccctcatccagtcgctggactcttcacggcgccagtaccaggag
aagtacaagcaggtggagcagtacatgtccttccacaagctgcccgccgacttccgccag
aagatccacgactactacgagcaccgctaccagggcaagatgttcgacgaggacagcatc
ctgggcgagctcaacgggcccctgcgggaggagattgtcaacttcaactgccggaagctg
gtggcctcgatgccactgtttgccaacgctgaccccaacttcgtcacggccatgctgacc
aagctcaagttcgaggtcttccagccaggtgactacatcatccgtgaaggcaccatcggc
aagaagatgtacttcatccagcacggggtggtcagcgtgctcaccaagggcaacaaggag
atgaagctgtccgacggctcttactttggggagatctgcctgctgacgcggggccggcgc
acggcgagcgtgcgggctgacacctactgccgcctctactcattgagcgtggacaacttc
aacgaggtactggaggagtaccccatgatgcggcgggcctttgagaccgtggccatcgac
cgcctggaccgcattggcaagaagaactcgatcctgctgcacaaggtacagcacgacctc
aactcgggcgtgttcaacaaccaggagaacgccatcatccaggagatcgtcaagtacgac
cgcgagatggtgcagcaggccgagctgggccagcgcgtcggcctcttcccgccaccacca
ccgccgcaagtcacctccgccatcgccacgctgcagcaagctgtggccatgagcttctgc
ccgcaggtggcgcgcccgctggtggggcccctggcgctaggctcgccacgccttgtgcgc
cgcccacccccggggcctgtgtctgctgccccctcacctgggcccgcgcccaccgccagc
cccccgggcgcacccgccagtccccgggcgccgcggacctcgccctatggcggcgcaccc
ggctctcccgctgcgccccgcgccggaccggcgctgcccgcgcgtcgcctgagccgcgcc
tcacgcccactgtccgcctcgcagccctcgctgccccacggcgcacctggtcccggcccc
acggcctcggcgcgcccggccagcagctccacaccgcgcctagggcccgcgcctgccacc
cgggccgctgcgcccagcccggatcgcagggactcggcctcgccctcgccgggcgctgcc
agtggcggactcgatccgctggactctgcgcgttcacgcctctcatccaacttgtga
DBGET
integrated database retrieval system
