KEGG   Sus scrofa (pig): 100625166
Entry
100625166         CDS       T01009                                 
Symbol
CLDN1
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03272  Virion - Hepatitis viruses
ssc04382  Cornified envelope formation
ssc04514  Cell adhesion molecules
ssc04530  Tight junction
ssc04670  Leukocyte transendothelial migration
ssc05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    100625166 (CLDN1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100625166 (CLDN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100625166 (CLDN1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100625166 (CLDN1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    100625166 (CLDN1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    100625166 (CLDN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100625166 (CLDN1)
   04147 Exosome [BR:ssc04147]
    100625166 (CLDN1)
   04515 Cell adhesion molecules [BR:ssc04515]
    100625166 (CLDN1)
Cilium and associated proteins [BR:ssc03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100625166 (CLDN1)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100625166 (CLDN1)
  Exosomal proteins of colorectal cancer cells
   100625166 (CLDN1)
Cell adhesion molecules [BR:ssc04515]
 Immunoglobulin superfamily
  L1 family
   100625166 (CLDN1)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Voltage_CLC SUR7 HAAS_TM CD20 DUF4134 TMEM174 Cytochrom_B_C DUF2207_C
Other DBs
NCBI-GeneID: 100625166
NCBI-ProteinID: NP_001231468
Ensembl: ENSSSCG00000028484
LinkDB
Position
13:complement(127714857..127730628)
AA seq 211 aa
MANAGLQLLGFILAFLGWIGSIVSTALPQWKIYSYAGDNIVTAQAIYEGLWMSCVSQSTG
QIQCKVFDSLLNLNTTLQATRALMVIGILLGLIAIFVATVGMKCMKCMEDDEVQKMRMAV
IGGVIFLISGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
LLCCSCPRKTTSYPTPRPYPKPSPSSGKDYV
NT seq 636 nt   +upstreamnt  +downstreamnt
atggccaacgcggggctgcagctgctgggcttcatcctggccttcctgggctggatcggc
tccatcgtcagcaccgcactgcctcagtggaagatttactcctacgctggtgacaacatt
gtgacggcccaggccatctacgaggggctgtggatgtcctgcgtgtcgcagagcaccggg
cagatccagtgcaaagtcttcgactccttgctgaatctgaacaccactttgcaagcaacc
cgtgccttgatggtaattggcatcctgctgggactaatagccatctttgtggccactgtt
ggcatgaagtgtatgaagtgcatggaagatgatgaggtgcagaagatgcggatggctgtc
attgggggagtgatctttcttatttcaggtctggctatcttagttgccacagcatggtat
ggtaacagaattgttcaagaattctatgaccccatgaccccagtcaatgccagatatgaa
tttggtcaggctctcttcactggctgggctgctgcttctctctgccttctgggaggtgcc
ctactttgctgctcctgcccccgaaaaacaacatcttacccaacaccaaggccctatcca
aaaccttcgccttccagtgggaaagactacgtgtga

DBGET integrated database retrieval system