Sus scrofa (pig): 100625166
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Entry
100625166 CDS
T01009
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03272
Virion - Hepatitis viruses
ssc04382
Cornified envelope formation
ssc04514
Cell adhesion molecules
ssc04530
Tight junction
ssc04670
Leukocyte transendothelial migration
ssc05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100625166 (CLDN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100625166 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100625166 (CLDN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100625166 (CLDN1)
09158 Development and regeneration
04382 Cornified envelope formation
100625166 (CLDN1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100625166 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100625166 (CLDN1)
04147 Exosome [BR:
ssc04147
]
100625166 (CLDN1)
04515 Cell adhesion molecules [BR:
ssc04515
]
100625166 (CLDN1)
Cilium and associated proteins [BR:
ssc03037
]
Other cilia and associated proteins
Stereociliary proteins
100625166 (CLDN1)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
100625166 (CLDN1)
Exosomal proteins of colorectal cancer cells
100625166 (CLDN1)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
L1 family
100625166 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
SUR7
HAAS_TM
CD20
DUF4134
TMEM174
Cytochrom_B_C
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
100625166
NCBI-ProteinID:
NP_001231468
Ensembl:
ENSSSCG00000028484
LinkDB
All DBs
Position
13:complement(127714857..127730628)
Genome browser
AA seq
211 aa
AA seq
DB search
MANAGLQLLGFILAFLGWIGSIVSTALPQWKIYSYAGDNIVTAQAIYEGLWMSCVSQSTG
QIQCKVFDSLLNLNTTLQATRALMVIGILLGLIAIFVATVGMKCMKCMEDDEVQKMRMAV
IGGVIFLISGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
LLCCSCPRKTTSYPTPRPYPKPSPSSGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgcggggctgcagctgctgggcttcatcctggccttcctgggctggatcggc
tccatcgtcagcaccgcactgcctcagtggaagatttactcctacgctggtgacaacatt
gtgacggcccaggccatctacgaggggctgtggatgtcctgcgtgtcgcagagcaccggg
cagatccagtgcaaagtcttcgactccttgctgaatctgaacaccactttgcaagcaacc
cgtgccttgatggtaattggcatcctgctgggactaatagccatctttgtggccactgtt
ggcatgaagtgtatgaagtgcatggaagatgatgaggtgcagaagatgcggatggctgtc
attgggggagtgatctttcttatttcaggtctggctatcttagttgccacagcatggtat
ggtaacagaattgttcaagaattctatgaccccatgaccccagtcaatgccagatatgaa
tttggtcaggctctcttcactggctgggctgctgcttctctctgccttctgggaggtgcc
ctactttgctgctcctgcccccgaaaaacaacatcttacccaacaccaaggccctatcca
aaaccttcgccttccagtgggaaagactacgtgtga
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