Sus scrofa (pig): 100625207
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Entry
100625207 CDS
T01009
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
100625207
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100625207
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100625207
Peptidases and inhibitors [BR:
ssc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100625207
Ubiquitin system [BR:
ssc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100625207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
100625207
NCBI-ProteinID:
XP_003484218
UniProt:
A0A480QWI2
LinkDB
All DBs
Position
Y:9374888..9552316
Genome browser
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGHSQPLFQNQTSSPDSSNENSPATPPDEQGQGDAPPQHE
DEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVQSEACQRFFR
DGLTISFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPH
CKFHIYNGTRPCESISSSAQLSEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDRF
INGSALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIEIIPQFLENLTDEELKKEAKNE
TKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKV
ISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNKILSIVLRDSLHQPQYVEKLEKILRFVI
KEKALTLEDLDNIWAAQSGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCS
QDRDTQKIQWIDRFIEELRNNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRHD
LINQLQHNHALVTLVAENLAAYMNNMRLYARDHEGYDPQTVRLGSRYSHVQEVQERLNFL
RFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFE
SNVLQLDPFLLTENGMKCFERFFKAVNCREGKLVAKRRTYMMDDLELIGLDYLWRVVMQS
NDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCILDGDKDSTN
CARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHGRQVDD
LDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNLKDKSVI
TAKLTQVSSNMPSSPDSSSDSSTGSPGNICHRYSDGPNPEVERCLPGVIMSQHPRYISFL
WQVADLGSNLNMPPLRDGARILMKLMPIDSTTVEKLRAICLDQAKLGENNLGQSIDSLFF
GPSASQVLYLTEVVYALLMPAGTPLADDSSDFQYHFLKSGGLRLVYSMLTRNNFLPNTDT
ETRRGAYLSGLKIAKLLLTAIGYGHVRAVAEACHPVVDGADPVTPINQVTHDQAVVLQNA
LQSIPNPSSECMLRNISIRLAQQISDEASRYMPDICVLRAIQKIIWASGCGALELIFSPN
EEITKIYEMSINASKGPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKSWQTFVINLL
LHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSDDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDNVKDTGETTGIEEPVLEGHLGVTKELLA
FQTPEKKCHIGCEKGANLIKELIDDFIFPASKVYLQCLRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPSIRNNILAVEGTGSDIDDDMFSDEKQESESNVDPRDDVFGY
THQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAVLSQVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVPGVAKLEGDNVNPESQLLQQNEQSEIETAGS
TKYRLVGVLVHSGQASGGHYYSYIIQRNGRDGERNRWYKFDDGDVTECKMDDDEEMKNQC
FGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERLDTIDQDDEMIRYISDLTITKPHQI
MSPTIERSVRKKNVQFMHNRMQYSLEYFQFVKKLLTCNSIYLSPAPGQDHLLPEAEEITM
ISVQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFSE
YLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSSFTSPGPSGQACDHLSLSDHLLRAVLN
LLRREVSEHGRHLQQYFNLFVMYANLGIAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQY
AELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNISQPIMPIQQNVADILFVR
TSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSDLLWQVAYSYTYELRPYLDLLLQ
ILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAY
QILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHS
ARMTLAKACELCPEEEPDDQEAAEEHESSPPEDTPLYPHSSGSHYQQNNHVHGQPYTGPA
AHHLNNHQKVGQRAQENYEGNEEVSASQMKDQ
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccactcgtggctctcctgtaggagggaatgacagccagggccaggctcct
gatggacattctcagcctctcttccagaatcagacctcatcaccagattcctccaatgag
aattccccagcaactcctccagatgaacaaggtcaaggtgatgctccaccacagcatgaa
gatgaggaacctgcttttccacatactgacctggcaaagttggatgacatgatcaaccgg
cctcgatgggtggttccagttttgccaaaaggcgaattagaagtgcttttagaagctgct
attgatcttagtaaaaaaggtcttgatgttcaaagtgaagcatgtcaacgtttttttcga
gatgggctaacaatatctttcactaaaattcttatggatgaggcagtgagtggctggaag
tttgaaattcataggtgcattattaacaatactcatcgcctagtggaactttgtgtggcc
aagttgtcccaagactggtttccacttctagaacttctcgcgatggccttaaatcctcat
tgcaaattccatatctacaacggtacacgtccatgtgaatcaatttcctcaagtgctcag
ttgtctgaagatgaactatttgctcgttcctcagatcctcgatcaccaaaaggttggcta
gtggatctcatcaataaatttggaacattaaatgggttccagattttgcatgatcgtttt
attaatggatcagcattaaacgttcaaataattgcagctcttattaaaccatttggacaa
tgctatgagtttctcagtcaacacacagtgaaaaaatattttattccaattatagaaata
attccacaatttttagaaaatttaactgatgaagaactgaaaaaagaagcgaagaatgaa
accaaaaatgatgccctttcaatgattattaaatctctgaagaatttagcttcacggatt
ccaggacaagaagaaactgtaaaaaatttagaaatttttaggttgaaaatgatacttaga
ttgttgcagatttcttcttttaatggaaagatgaatgcgctgaatgaaattaacaaggtc
atatctagtgtatcatattatactcataggcatggtaatcctgaggaggaagagtggctg
acagctgagcgaatggcagagtggatacaacagaacaaaatcttatccatagtcttacga
gatagtcttcatcaacctcaatatgtagaaaagctagagaagattcttcgttttgtgatt
aaagaaaaagctcttacattagaagatcttgataatatttgggcagcacagtcagggaaa
catgaagccattgtgaaaaatgtacatgatctcctggcaaagctggcttgggatttttct
cctgaacaacttgatcatctttttgattgctttaaggcaagttggacaaatgcaagtaaa
aaacaacgtgaaaagctgcttgagctgattcgacgtcttgctgaagacgataaagatggt
gtcatggcacataaagtgttgaaccttctttggaatctggctcatagtgatgatgtgccg
gtggacatcatggacctagctctcagtgcccacataaaaatactagattacagttgttca
caggatcgggacacacagaagatccagtggatagatcgttttatagaagaacttcgcaat
aatgacaagtgggtaattcctgcactgaaacaaataagagaaatttgtagtttgtttggt
gaggcacctcaaaatttgagtcagactcagcgaagtccccatgtattttaccgtcatgat
ttaatcaatcaacttcagcacaatcatgccttagttactttggtagcagaaaaccttgct
gcttatatgaataacatgcgactatatgctagagaccatgaaggctatgacccacaaact
gtgaggcttggaagtagatatagtcatgttcaagaagttcaagaacggcttaacttcctc
agatttttattgaaggatggccaactctggctctgtgctcctcaggcaaaacaaatatgg
aaatgcttagcagagaatgcagtttacctttgtgatcgtgaagcctgttttaagtggtat
tccaagttaatgggggatgaaccagacttagatcctgatattaataaggatttttttgaa
agtaatgtgcttcagcttgatcctttcctgttaactgaaaatggaatgaaatgttttgaa
cgattcttcaaagctgttaactgtagagaagggaaactggtagcaaaaagaagaacctat
atgatggatgatttggaactaattggattagactacctttggagggttgtaatgcagagc
aatgatgacattgctagcagagctatagatctccttaaagagatatatacaaaccttggt
cccaggttacaggtcaatcaggtggttatccatgaggacttcattcagtcttgctttgat
cgtttgaaagcttcatatgatacattgtgtattttggatggtgacaaagatagtacaaat
tgtgcaagacaggaagccattcgaatggttcgagtattaactgttttaagggaatacata
aatgaatgtgatagtgattatcatgaggagagaaccattctacctatgtcaagagcattc
cgtggtaaacatctctctctaatagttcgatttccaaaccatggcagacaggttgatgac
ctggacatatggtctcataccaatgatactgttggttcagtacgtcgatgtattctcaat
cgtattaaagcaaatgtagcccatacaaaaattgaactctttgtgggtggtgagctgata
gattctgaagatgacagaaagctaattggacaattaaacttaaaagataaatcagtaatt
acagccaaacttacacaagtaagttccaatatgccttccagccctgatagttcttccgat
tcctcaactggatctcctggaaatatttgtcatcgctatagtgacggtcctaatccagaa
gtggaacgctgtttgcctggagtgataatgtcacaacatcccaggtatatctctttcctt
tggcaagttgcagatttaggtagcaatctgaatatgccacctcttagagatggagcaaga
atacttatgaaactcatgccaatagatagcacaacagtagaaaaattaagagctatttgt
ttggaccaggcaaaacttggagaaaataaccttggacagtctattgattcacttttcttt
ggtccttctgcttcccaagtcctatacctaacagaggtagtttatgccttgttaatgcct
gctggtacacctttggcagatgactcctctgactttcagtatcacttcttgaaaagtggt
ggcttacgccttgtgtatagtatgctgacaagaaataactttctgccaaatacagatacc
gaaacacgaaggggtgcttaccttagtggtcttaaaatagccaaactcttgctaactgct
ataggctatggccatgttcgagctgtagcagaagcttgtcatccagttgtagatggtgca
gatcctgtaactccgattaaccaagttactcatgatcaagcagtggtgctacaaaatgcc
cttcagagcattcctaatccatcatctgagtgcatgcttagaaacatatcaatacgtctt
gctcagcaaatatctgatgaggcttcaagatatatgcctgatatttgtgtacttagagcc
atacaaaaaatcatctgggcatcaggatgtggggcattagagctaatatttagccctaat
gaagaaatcactaaaatttatgagatgagcattaatgcaagcaaaggaccagacatggaa
gatgaacaggtttgctgtgaagcattggaagtgatgacattatgttttgctctaattcca
acagccctggatgctcttagtaaagaaaagtcctggcagacatttgtcattaacttatta
ttgcactgtcccagcaaaactgttcgtcaactggcacaggagcagttttttttaatgtgt
accagatgttgcatgggacacaggcctctgcttttcttcattactctgctctttaccatt
ttggggagcacagcaagagagagaggtaaacattcagatgactatttcactcttctacgg
caccttcttaattatgcttacaatagtaatattaatgtacctaatgctgaagttcttctc
aacaatgaaattgattggcttaaaagaattagggataatgttaaagacacaggagaaaca
acaggtattgaagagccagtattagaaggccaccttggagtaacaaaagagttattggct
tttcaaacgcctgagaaaaagtgtcatattggttgtgaaaaaggtgctaatctcattaaa
gaactaattgatgatttcatctttcctgcctccaaagtttacctacaatgtctgagaaat
ggagaactaccagctgagcaggccatcccagtttgtagttcaccggccaccatcaatgct
gggtttgaactgcttgtagcactagctgttggctgtgtaaggaatctcaaacagatagta
gattgtttgactgaaatgtattacatgggcacagcaataactacttgtgaagcacttact
gagtgggaatatctaccacctgttggaccccgtccaccgaaaggatttgtgggactcaaa
aatgctggagctacttgttacatgaattctgtgatccagcagctgtacatgattccttcc
atcaggaacaatattcttgcagttgaaggcacaggtagtgatatagatgatgatatgttc
agtgatgagaaacaagagagtgagagtaatgttgatccccgagatgatgtatttggatat
actcatcagtttgaggacaaaccagcattaagcaaaacagaagataggaaagagtacaat
attggtgtcctaagacaccttcaggtcatctttggtcatttggctgcttcccggctacaa
tactatgtgcccagaggattttggaaacagttcaggctttggggtgaacctgttaatcta
cgtgaacaacacgacgccttagagttttttaattctttggtggatagtttagacgaagct
ttgaaagctttaggacatccagctgttctaagccaagtcttgggagggtcctttgctgat
cagaagatttgccaaggctgcccacatagatacgagtgtgaagaatcttttacaactctg
aatgtagatatcagaaatcaccaaaaccttcttgattctttggaacagtatatcaaagga
gatttattggaaggtgcaaatgcataccgttgtgaaaaatgtgataaaaaggttgataca
gtaaagcgattgctaattaaaaaattgcctcctgttcttgctatccaattgaaaagattt
gactatgactgggaaagagaatgtgcaattaaattcaatgattactttgaatttcctcga
gagctggacatggaaccttacacagtaccaggggttgcaaagctggaaggagataatgta
aatccagagagtcagttgttacaacagaatgagcaatctgaaattgagacagcaggaagc
acaaaatacagacttgtaggggtgcttgtacacagtggtcaagcaagtggtggacattat
tattcctacatcattcaaaggaatggtagagatggtgagagaaatcgctggtataaattt
gatgatggagatgtaacagagtgtaaaatggatgatgatgaagaaatgaaaaatcagtgt
tttggtggagagtacatgggagaagtatttgatcatatgatgaaacgcatgtcatacagg
cgacagaaaaggtggtggaatgcttatatactcttttatgaacgattagacacaatagac
caagatgatgagatgatcagatatatatcagacctaactatcacaaaaccccatcagatt
atgtcaccaaccattgagagaagtgtgcggaaaaaaaatgtgcaattcatgcataaccga
atgcagtacagtttagaatattttcaatttgtgaaaaaactgcttacgtgtaatagtatt
tacttaagccctgctccaggacaagatcacttgttgcctgaagcagaagaaatcactatg
attagcgttcagcttgcagctaggttcctctttaccactggatttcacaccaagaaaata
gtccgtggccctgccagtgattggtatgatgcactgtgcattctacttcgtcacagcaag
aatgtacgtttttggtttgctcataatgtccttttcaatgtttcaaatcgtttctctgaa
tatcttctggagtgccctagtgcagaagtgaggggtgcttttgcaaaacttatagtattt
attgcacatttttctttgcaagatgggccttgtccttcatctttcacatctccaggacct
tctggtcaggcatgtgatcacttaagcttgagtgatcacttactaagagcagtattaaat
cttctgagaagggaagtttcagagcatggccgtcatttacagcaatatttcaatctgttt
gtaatgtatgccaatttaggcatagcagaaaagacacagcttctgaagttgagcgtacct
gctacctttatgcttgtgtctttagatgaaggaccaggtcctccaattaaatatcagtat
gctgaattaggcaagttgtactcagtagtgtctcaactgatccgctgctgcaatgtttcc
tcaagaatgcagtcttcaatcaatggtaatcctcctcttcccaatccttttggtgatcct
aatatatcacagcctataatgccaattcagcagaatgtggcagacattttatttgtgaga
acaagttacgtaaagaaaatcattgaagactgtagtaactcagaggaaaccatcaaatta
cttcgtttttgctgctgggagaatcctcagttctcctctactgtccttagtgaccttctc
tggcaggttgcatattcatacacctatgaacttcggccatatttggatctacttctgcag
attttactgatagaggattcctggcagactcacagaattcataatgcacttaaaggaatc
ccagatgatcgagatgggttgtttgacactatccaacgctctaagaatcactatcaaaaa
agagcataccagtgtataaaatgtatggtagctctctttagcagctgtcctgttgcttac
cagatattgcagggtaatggagaccttaaaagaaagtggacctgggcagtggaatggctt
ggagatgaacttgaaagaagaccatatactggcaatcctcaatatacttataataattgg
tctcctccagtgcaaagcaatgaaacatcaaatggttatttcttagagagatcacatagt
gctaggatgacactggcaaaagcttgtgaactctgtccagaggaggagccagatgaccaa
gaagctgcagaagaacatgaatcatctcccccagaagataccccattatatcctcattca
tccggatctcactatcagcagaacaatcacgttcacggacagccatatacagggccagca
gcacatcacttaaacaaccatcagaaagttggccaacgagcacaagaaaattatgaaggc
aatgaagaagtatccgcatctcaaatgaaggatcagtga
DBGET
integrated database retrieval system
