Sus scrofa (pig): 100625293
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Entry
100625293 CDS
T01009
Symbol
EDEM3
Name
(RefSeq) ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X1
KO
K10086
ER degradation enhancer, mannosidase alpha-like 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100625293 (EDEM3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ssc04091
]
100625293 (EDEM3)
Lectins [BR:
ssc04091
]
M-type lectins
100625293 (EDEM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_47
PA
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-GeneID:
100625293
NCBI-ProteinID:
XP_020958283
Ensembl:
ENSSSCG00000015566
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All DBs
Position
9:complement(125908861..125983073)
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AA seq
950 aa
AA seq
DB search
MSGAGGGRGCGSRVPQRAPWNLVAATAALCLVSATSVWTAGAAPMSREEKQRLGNQVLEM
FDHAYGNYMEHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFSLTLIDSLDTLVVLNK
TKEFEDAVRKVLRDVNLDNDVVVSVFETNIRVLGGLLGGHSLAIMLKEKGEYMQWYNDEL
LQMAKQLGYKLLPAFNTTSGLPYPRINLKFGIRKPEARTGTETDTCTACAGTLILEFAAL
SRFTGATIFEEYARKALDFLWEKRQRSSNLVGVTINIHTGDWVRKDSGVGAGIDSYYEYL
LKAYVLLGDDSFLERFNTHYDAIMRYISQPPLLLDVHIHKPMLNARTWMDALLAFFPGLQ
VLKGDIRPAIETHEMLYQVIKKHNFLPEAFTTDFRVHWAQHPLRPEFAESTYFLYKATGD
PYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKED
IIFDVEDYIFTTEAHLLPLWLSTTNQSISKKNTTSDYTELDDSNFDWTCPNTQILFPNDP
LYAQSIREPLKNVVDKSCPRGIIRVREESFRSGAKPPLRARDFMATNPEHLEILKKMGVS
LIHLKDGRVQLVQHAIQAASSIDAEDGLRFMQEMIELSSQQQKEQQLPPRAVQIVSHPFF
GRVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGKIALIQRGQCMFAE
KARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDA
MREYEEVEVLLSDKAKDRAAILKGKMIPSYIINSNPDMENEEQPSSENDFQNQSAEQMAS
GSQEVDLVDEESPEEGSSNSHPDSSSPADRDSAAGGPPSEQNSHPTESPEPTRLDGECTD
LDNQLEQQSDTEEDSNPNVSWGKKVQPIDSILADWNEDIEAFEMMEKDEL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagccggcggcggcaggggctgtgggtctcgggtcccccagcgagcgccatgg
aacctggtggcggcgacggccgcgctctgtctggtgtcagccacatccgtgtggacggcg
ggggccgcgcccatgagcagggaggagaaacagaggcttgggaatcaagtactggaaatg
tttgatcatgcttatggcaactatatggaacatgcttacccagcggatgaactcatgcct
ttaacctgcagaggtcgtgttagaggccaggagccaagtcggggtgatgttgatgatgcc
ttgggaaaattttccctgacactgattgattctttggacactcttgtggtattaaataaa
actaaagaatttgaagatgctgtgagaaaagttttaagagatgttaatttagataatgat
gtagttgtatcagtctttgaaacaaacatcagagttcttgggggccttttgggtggacat
tcactggcaatcatgctgaaggaaaaaggcgagtacatgcagtggtacaatgatgaactt
ctccaaatggcaaagcagttgggttacaagcttttaccagctttcaatactaccagtggc
cttccttatccaagaattaatttaaagtttggtatcagaaaaccagaagctcggacggga
actgagacagatacctgtaccgcttgtgcaggtaccttgatccttgagtttgctgcttta
agtcgattcacaggagcaacgatatttgaggagtatgcaagaaaagctcttgattttctc
tgggaaaaaagacagcgaagtagtaatttagtgggtgtgaccataaatattcatactgga
gattgggtacgaaaagatagtggagttggagcagggattgattcgtattatgaatatctg
ctgaaagcctatgtcttgcttggagatgacagctttctggaaagatttaatacacactat
gatgccataatgagatacattagccagccacctcttctacttgatgtgcatatccacaag
ccaatgctgaatgctcggacttggatggatgctttgcttgccttttttccaggtttgcag
gtcttaaaaggggatattagacctgctattgaaactcatgaaatgttgtatcaggtgata
aaaaaacacaattttctaccagaggcgtttaccacagatttcagggtgcactgggctcaa
catcctttaaggccagaatttgcagaaagtacctacttcttgtataaagctacaggagac
ccttactaccttgaagtagggaaaacacttattgaaaacttaaataaatatgctagagtg
ccttgcggatttgctgccatgaaggatgttcgtactggaagtcatgaggacagaatggat
tctttcttcttggctgaaatgtttaagtatctttacctgttattcgcggataaagaagac
attatttttgacgtagaagattatatttttaccacagaagctcatctgttacccctttgg
ctctctactacaaatcaaagcatctctaagaagaacacaacttcagactatacagaactg
gatgatagtaattttgactggacttgtccaaacactcagattctcttccctaatgatcca
ttgtatgctcagagcattcgtgaacccttgaaaaatgtggtggacaagagctgtcctaga
ggcatcatcagagtcagagaggagagtttcaggagtggagctaaaccccctctgagagcc
agagatttcatggccactaaccctgagcatttagaaatcttgaagaagatgggggtgagt
ttgattcacctcaaagacgggagagtccagttggttcaacatgcaatccaagctgctagt
tcaattgatgctgaagatggtttgaggttcatgcaggagatgattgaattatcaagtcag
caacagaaagaacagcagctgcctccacgagctgtacaaattgtttcccacccatttttt
ggccgagtagtattaactgctggaccagctcagtttgggcttgatctctctaaacataaa
gagacaagaggatttgttgcaagtagtaaaccatacaatggctgctcagagcttactaac
cccgaggcagtgatggggaaaattgccctgatacagagaggacagtgcatgtttgcagaa
aaggcacgcaacatccagaacgctggagccattggtggcattgttattgatgacaacgag
gggagcagcagtgatactgcccctctgttccagatggcaggtgatggaaaggacacggat
gacatcaagatccccatgctgtttttattcagtaaagaaggaagtatcatattggatgcc
atgcgggaatatgaggaggtagaggtgctcctttctgacaaagcaaaagatcgagcagca
atattaaaaggtaaaatgattccaagctacattattaatagtaatcctgacatggaaaat
gaagaacaaccatcctctgaaaatgactttcagaatcagagtgctgaacagatggcatca
ggttctcaagaggttgatttagttgatgaagagtctcctgaggaaggttcttcaaactct
cacccagactcatcatctccagcagatagggacagtgctgcaggtggtcctccttctgaa
cagaattctcatcccacagaaagccctgagccgacacgtctggatggtgaatgtacagat
ttagataaccaacttgaacaacagtcagacactgaggaggattccaatcctaatgtcagc
tggggcaagaaggtccagcctatagactccatattagcagactggaatgaagatatagaa
gcatttgaaatgatggagaaggatgagctctga
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