Sus scrofa (pig): 100625381
Help
Entry
100625381 CDS
T01009
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04014
Ras signaling pathway
ssc04137
Mitophagy - animal
ssc04144
Endocytosis
ssc04145
Phagosome
ssc04148
Efferocytosis
ssc04962
Vasopressin-regulated water reabsorption
ssc05132
Salmonella infection
ssc05146
Amoebiasis
ssc05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100625381 (RAB5B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100625381 (RAB5B)
04145 Phagosome
100625381 (RAB5B)
04137 Mitophagy - animal
100625381 (RAB5B)
04148 Efferocytosis
100625381 (RAB5B)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
100625381 (RAB5B)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100625381 (RAB5B)
05152 Tuberculosis
100625381 (RAB5B)
09174 Infectious disease: parasitic
05146 Amoebiasis
100625381 (RAB5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100625381 (RAB5B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100625381 (RAB5B)
04031 GTP-binding proteins [BR:
ssc04031
]
100625381 (RAB5B)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
100625381 (RAB5B)
Endosome - Lysosome transport
100625381 (RAB5B)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100625381 (RAB5B)
Exosomal proteins of other body fluids (saliva and urine)
100625381 (RAB5B)
Exosomal proteins of colorectal cancer cells
100625381 (RAB5B)
Exosomal proteins of melanoma cells
100625381 (RAB5B)
GTP-binding proteins [BR:
ssc04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
100625381 (RAB5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
100625381
NCBI-ProteinID:
XP_020947454
Ensembl:
ENSSSCG00000029828
UniProt:
A0A8D0PBZ2
LinkDB
All DBs
Position
5:21373333..21392729
Genome browser
AA seq
215 aa
AA seq
DB search
MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNTLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgactagcagaagcacagccaggcccaatgggcagccccaggccagcaaaatatgccag
ttcaagttggtcttactgggtgaatctgcagtagggaagtctagcctggtattacgtttt
gtcaaaggacagttccacgagtaccaggagagcaccattggagcggccttcctcacccag
tctgtttgtctagatgacacaacagtcaagtttgagatctgggacacagctgggcaagag
cgataccatagcttggcccccatgtactacagaggtgcccaggctgcaattgtggtttat
gacattactaatcaggaaacctttgcccgagcgaagacatgggtaaaggaactacagcga
caggccagtcctagcatcgttattgccctggcagggaacaaagcggacctggccaacaag
cgcatggtggagtatgaagaggcccaggcgtatgcagatgacaacaccttattgtttatg
gagacttcagccaagacagctatgaacgtgaacgatctcttcctggcaatagctaagaag
ttgccaaagagtgaaccccagaatctggggggtgcagcaggccgaagccggggtgtggat
ctccatgagcagtcccagcagaacaagagccagtgttgtagcaactga
DBGET
integrated database retrieval system