KEGG   Sus scrofa (pig): 100625381
Entry
100625381         CDS       T01009                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04014  Ras signaling pathway
ssc04137  Mitophagy - animal
ssc04144  Endocytosis
ssc04145  Phagosome
ssc04148  Efferocytosis
ssc04962  Vasopressin-regulated water reabsorption
ssc05132  Salmonella infection
ssc05146  Amoebiasis
ssc05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    100625381 (RAB5B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100625381 (RAB5B)
   04145 Phagosome
    100625381 (RAB5B)
   04137 Mitophagy - animal
    100625381 (RAB5B)
   04148 Efferocytosis
    100625381 (RAB5B)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    100625381 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100625381 (RAB5B)
   05152 Tuberculosis
    100625381 (RAB5B)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100625381 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100625381 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100625381 (RAB5B)
   04031 GTP-binding proteins [BR:ssc04031]
    100625381 (RAB5B)
Membrane trafficking [BR:ssc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100625381 (RAB5B)
 Endosome - Lysosome transport
    100625381 (RAB5B)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100625381 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   100625381 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   100625381 (RAB5B)
  Exosomal proteins of melanoma cells
   100625381 (RAB5B)
GTP-binding proteins [BR:ssc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100625381 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 100625381
NCBI-ProteinID: XP_020947454
Ensembl: ENSSSCG00000029828
UniProt: A0A8D0PBZ2
LinkDB
Position
5:21373333..21392729
AA seq 215 aa
MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNTLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atgactagcagaagcacagccaggcccaatgggcagccccaggccagcaaaatatgccag
ttcaagttggtcttactgggtgaatctgcagtagggaagtctagcctggtattacgtttt
gtcaaaggacagttccacgagtaccaggagagcaccattggagcggccttcctcacccag
tctgtttgtctagatgacacaacagtcaagtttgagatctgggacacagctgggcaagag
cgataccatagcttggcccccatgtactacagaggtgcccaggctgcaattgtggtttat
gacattactaatcaggaaacctttgcccgagcgaagacatgggtaaaggaactacagcga
caggccagtcctagcatcgttattgccctggcagggaacaaagcggacctggccaacaag
cgcatggtggagtatgaagaggcccaggcgtatgcagatgacaacaccttattgtttatg
gagacttcagccaagacagctatgaacgtgaacgatctcttcctggcaatagctaagaag
ttgccaaagagtgaaccccagaatctggggggtgcagcaggccgaagccggggtgtggat
ctccatgagcagtcccagcagaacaagagccagtgttgtagcaactga

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