Sus scrofa (pig): 100625407
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Entry
100625407 CDS
T01009
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05014
Amyotrophic lateral sclerosis
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100625407 (NEFM)
05022 Pathways of neurodegeneration - multiple diseases
100625407 (NEFM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100625407 (NEFM)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
100625407 (NEFM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
100625407
NCBI-ProteinID:
XP_005670496
Ensembl:
ENSSSCG00000009648
UniProt:
A0A8D1UI82
F1RJU6
LinkDB
All DBs
Position
14:8955346..8967211
Genome browser
AA seq
934 aa
AA seq
DB search
MSYTLDSLGNPSAYRRGTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LTYSSAMLSSAESSLDFSQSSSLLNGGSGPGGDYKLSRSNEKEQLQGLNDRFAGYIEKVH
YLEQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLELVNHEKAQVQLDSDHLEE
DIHRLKERFEEEARLRDDTEAAIRALRKDIEEASLVKVELDKKVQSLQDEVAFLRSNHEE
EVADLLAQIQASHITVERKDYLKTDISSALKEIRSQLECHSDQNMHQAEEWFKCRYAKLT
EAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQ
DTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFAGSIT
GPLYTHRQPSITISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAIAEE
LAVSMKEEVKEEEAEEKEEKQEAEEVVAAKKSPVKAAAPELKGEEEGEKEEGEGQEEEEE
EEEEGAKSDQAEEGGSEKEVSSEKEEGEQEEEGEIEAEGEGEEAEAKEEKKVEEKREEVA
PKEELVAEAKVEKPEKAKSPVSKSPVEEVKPKAEAGVGKGEQKEEVEKVEEEKKEAAKES
PKEEKVEKKEEKPKDLPEKKKAESPVKEEAGKVSPEKAPSPAKEEAGKVSPEKAPSPAKE
EAGKVSPEKAPSPAKEEAGKVSPEKAPSPSKEEAGKVSPEKAPSPSKEEAGKVSPEKAPS
PSKEEAGKVSPEKDAKEEKPQQKKEKVEGEGGKEEGGLKESRKEDIAINGEVEGKEEQET
KEKGSGGEEEKGVVTNGLDLSPGDRSEEKVVVTKKVEKITSEGGDGATKYITKSVTVTQK
VEEHEETFEEKLVSTKKVEKVTSHAIVKEVTQSD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacactggactcgctgggcaacccgtccgcctaccggcggggaaccgagacc
cgctcgagcttcagccgcgttagcggctccccttccagcggcttccgctcgcagtcgtgg
tcccgaggctcgcccagcacagtgtcctcctcctacaagcgcagcgctctagccccgcgc
ctcacctacagctcggccatgctcagctccgccgagagcagcctcgacttcagccagtcc
tcctccctgctcaacggcggttccgggccgggcggcgactacaagctgtcccgctccaac
gagaaggagcagctgcaggggctgaacgaccgcttcgcgggctacatcgagaaggtgcac
tacctggagcagcagaacaaggagatcgaggcggagatccaggcgctgcggcagaagcag
gcctcgcacgcccagctgggcgacgcgtatgaccaggagatccgtgagctgcgcgccaca
ctcgagctggtgaaccacgagaaggctcaggtacagctggactcggaccacctggaagaa
gacatccaccgactcaaggagcgcttcgaggaggaggcacggctgcgcgacgacaccgag
gcggccatccgcgcgctgcgcaaagacatcgaggaggcgtcgctggtcaaggtggagctg
gacaagaaagtgcagtcgctgcaggatgaggtggccttcttgcggagcaatcacgaagag
gaggtggccgacctgctggctcagatccaggcgtcgcacatcacggtggagcgcaaagat
tacctgaagactgacatctcgtcggcgctgaaagagatccgctcccaactcgagtgccac
tccgaccaaaacatgcaccaggccgaagagtggtttaaatgccgctacgccaagctcacc
gaggctgccgagcagaacaaggaggccatccgctccgccaaggaagagatcgccgagtac
cggcgccagctgcagtccaagagcatcgagctcgagtcagttcgaggcaccaaggagtcc
ctggagcgacagctcagcgacatcgaggagcgccacaaccacgaccttagcagctaccag
gacaccatccagcagttggaaaatgagcttcggggcacaaagtgggaaatggctcgtcat
ttgcgagaataccaggatctcctcaacgtcaagatggctttggatatcgagattgctgcg
tacaggaaacttctggagggtgaagagaccagatttagcacatttgcaggaagcatcact
gggcctctgtatacacaccgacagccctccatcacaatatccagtaagattcagaaaacc
aaggtggaggctcccaagctaaaggtccaacacaaatttgttgaggagatcatagaggaa
accaaggtggaggatgagaaatcagaaatggaagaagccctgactgccattgcggaggaa
ttggcagtttccatgaaagaggaggtcaaggaagaagaggctgaagaaaaggaagagaaa
caagaagctgaagaagttgtagctgcgaagaagtctccggtgaaagctgctgcacctgaa
cttaaaggagaggaggaaggagaaaaggaggagggagaaggccaagaggaagaagaggag
gaagaagaggagggcgctaaatcagaccaagccgaagagggaggatctgagaaggaagtt
tctagtgaaaaagaggaaggtgagcaggaagaggaaggagaaattgaggctgaaggtgaa
ggggaggaagcagaggctaaggaggaaaagaaagtggaggagaagcgtgaggaagtggct
cccaaggaggagctggtggcagaagccaaggtggagaagccagaaaaagccaagtcaccg
gtgtcaaaatcaccggtggaagaggtgaaacccaaagcagaagctggagttgggaaagga
gagcagaaagaggaagtcgagaaagtggaggaagaaaagaaagaagcagcaaaggaatct
cccaaggaagagaaggtagagaaaaaggaggagaagccaaaggacctgccagagaagaag
aaggctgaatccccagtgaaggaggaagcaggaaaagtgagcccagagaaggctccatcc
ccagcaaaggaggaagcaggaaaggtgagcccagagaaggctccatccccagcaaaggag
gaagcaggaaaggtgagcccagagaaggctccatccccagcaaaggaggaagcaggaaag
gtgagcccagagaaggctccatccccatcaaaggaggaagcaggaaaggtgagcccagag
aaggctccatccccatcaaaggaggaagcaggaaaggtgagcccagagaaggctccatcc
ccatcaaaggaggaagcaggaaaggtgagcccagagaaggatgccaaagaggagaagcca
cagcagaagaaggagaaagtggaaggagagggagggaaggaggagggaggtttgaaggaa
tccaggaaggaagacatagccatcaatggggaggtggaaggaaaggaggagcaggaaact
aaggagaaaggcagtgggggggaagaggagaaaggggtggttaccaatgggctagacttg
agcccgggtgatagaagtgaggagaaagtggtggtgaccaaaaaggtagaaaaaatcacc
agtgaggggggagatggtgctaccaaatacatcaccaaatctgtaaccgtcactcaaaag
gtcgaagagcatgaagagacctttgaggagaaactcgtgtctaccaaaaaagtagagaag
gtcacttcccatgccatcgtaaaggaagtcacccagagtgactaa
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