Sus scrofa (pig): 100625544
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Entry
100625544 CDS
T01009
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
ssc03420
Nucleotide excision repair
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100625544 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
100625544 (GTF2H2)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100625544 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100625544 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100625544 (GTF2H2)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100625544 (GTF2H2)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100625544 (GTF2H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
ORC3_N
IBR
Motif
Other DBs
NCBI-GeneID:
100625544
NCBI-ProteinID:
NP_001231240
Ensembl:
ENSSSCG00000028786
LinkDB
All DBs
Position
16:47658015..47700926
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVIEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCNGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRARYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEHNGERFCYGCQGELKDQHVYIC
SVCQHVFCVDCDVFVHDSLHCCPGCIHKIPAPSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagcctgaaagaactaagcgatgggaaggaggctatgaaagaacatgggag
attcttaaagaagatgaatcaggatctcttaaagctacaatagaagatattctcttcaaa
gcaaagagaaaaagggtaattgagcaccatggacaagttcgacttggaatgatgcgccat
ctttacgtggtagtagatggatcaagaacaatggaagaccaagatttaaagccaaataga
ctgacatgtactttaaagttgttggaatacttcgtagaggaatattttgatcaaaaccct
attagtcagattggaataattgtaacaaaaagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaagaaaacacataacgtctttgaagaaggctgtagatatgacttgcaat
ggagaaccatctctttataactccttaagcatggctatgcagactctaaaacacatgcct
ggacatactagtagagaagtcctcatcatctttagcagcctcacaacttgtgacccatct
aatatctatgatctaatcaagaccctaaaggcggctaaaattagagtgtctgttattgga
ttgtctgcagaggttcgggtttgcactgtgctcgctcgtgaaactggaggcacataccat
gttattttagatgaaagccattacaaagaattgctgacacatcatgttagtcctcctcct
gctagctcaagttctgaatgctcacttattcgtatgggatttcctcagcatactattgct
tctctgtctgatcaagatgcaaaaccctctttcagcatggcgcatctggatagcaacact
gagccaggacttacattaggaggctatttctgcccacagtgtcgggcaaggtactgtgag
cttcctgttgaatgtaaaatctgtggtcttaccttggtgtctgctccccatttggcacgg
tcttaccaccacttatttcctttggatgcctttcaagaaattcccctagaagaacataat
ggagaaaggttttgttatggctgtcagggggaattgaaagaccaacatgtctatatttgc
agtgtgtgccagcatgttttctgtgtggactgtgacgtttttgttcatgactctctccat
tgttgtcctggctgtattcataagattccagctccttcaggtatttga
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integrated database retrieval system
