Sus scrofa (pig): 100626040
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Entry
100626040 CDS
T01009
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100626040 (NUP93)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100626040 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100626040 (NUP93)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100626040 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
100626040
NCBI-ProteinID:
NP_001231081
Ensembl:
ENSSSCG00000025830
UniProt:
A0A8D0LY85
A0A481B0D3
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All DBs
Position
6:18711869..18827705
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AA seq
819 aa
AA seq
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MDTDGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKR
TFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYISDVGPPGRSSLDS
IEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKNISDMWAMVKQMTDVLLAPATD
ALKSRNSVEVRMEFVRQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKD
RRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQ
VCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLF
RMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRDEKDSQGENMFLRCVSELVVESREFDMILGKLENDGSRKPGVIDK
FTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNK
ERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLV
PLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSASRPQRVIED
RDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggatactgatgggtttggtgagctccttcagcaagctgaacagcttgccgctgagacc
gagggcatctcagagcttccccatgtggaacggaacctacaggagatccagcaggcaggc
gagcgcctgcgttcccgtaccctcacacgcacgtcccaggagacagcagatgtcaaggcg
tcagttctccttgggtctcgggggcttgacatatctcacatctctcagcgattggagagc
ctgagtgcagccaccacctttgagcctctcgagcctgtgaaggacacagacattcagggc
ttcctaaagaatgaaaaggacaatgccctgctgtctgccatcgaagagtcccggaagagg
accttcggtatggctgaggagtaccatcgagagtcaatgctggttgagtgggagcaagtg
aaacagcggattctccacacactgctggcatcaggagaagatgcccttgactttactcag
gaaagtgagccaagttatatcagtgatgtgggaccccctggtcgaagctctctggacagc
atcgagatggcctacgcccggcagatttatatctataatgagaagattgtaaatggacac
ctgcagcctaatctcgtggacctctgtgcctctgtcgcagagctggatgataagaacatc
tctgacatgtgggccatggtaaaacaaatgacagatgtgcttttggcgccggcaaccgac
gccctgaagagccgtaacagcgtggaggtgcgcatggagttcgtcaggcaggccttgggg
tacctggagcagagttataagaattacacccttgtgactgtctttggaaacttgcatcag
gcccagctgggcggggtgcctgggacttaccagttggttcgaagtttcctgaacatcaaa
cttccagctcccttgcctggacttcaggatggagaggtggaaggccatcccgtgtgggcc
ttaatttattactgcatgcgctgtggagacctgcttgccgcctcacaggtggttaaccgc
gctcagcaccagctgggagagtttaaaacttggttccaggagtacatgaacagcaaggac
agaagattgtccccagctacagagaacaagctccggctgcattaccgcagggccctcagg
aacaacacggatccctacaaacgggccgtgtactgtatcatcggcagatgtgatgtcacc
gacaaccagagcgaggtggccgacaaaaccgaggactacctgtggctcaagttgaaccag
gtgtgttttgatgacgacggcaccagctccccacaagacaggctcactctctctcagttc
cagaaacagttgttggaagactatggcgagtcccacttcacggtgaaccagcagcccttc
ctctacttccaagtgctcttcctgacagcgcagtttgaagctgcaattgcctttctcttc
cgcatggagcggctgcgctgccatgctgtccacgtggcactggtgctctttgagctgaag
ctgcttttaaaatcctcgggacagagcgcccagctcctcagccatgagcccggtgaccct
ccctgcatgcggaggctgaactttgtgaggctgctcatgctctacacccgcaagtttgag
tccacggacccgagggaggccctccagtacttttacttcctcagggatgagaaggatagt
caaggagaaaatatgtttctgcgctgtgtgagcgagctggtggtagaaagtcgagagttt
gatatgattcttgggaaactagagaatgatggaagtagaaagcctggagtcatagataag
tttactagtgacacaaagcctattatcaacaaagttgcttctgtggcagaaaacaaagga
ctgtttgaagaagcagcaaagctttatgaccttgccaagaatgctgacaaggtgctggag
ctgatgaacaaactgctcagccctgtcgtcccccagatcagtgcgccacagtccaacaag
gagaggctgaagaacatggcgctctccatcgcagaacggtatagggctcagggaatcagt
gcaaataaatttgtggactccacgttctatcttctgttggacttgatcaccttttttgac
gagtatcacagtgggcatattgacagagcctttgatataattgatcgcttgaagctagtg
cctctgaatcaggaaagtgtggaagaaagagtggctgccttcagaaatttcagtgatgag
atcaggcacaacctctcagaggtgcttctcgccaccatgaacatcttgttcacacagttt
aagaggctcaaggggacgagtccatcctcggcatccaggccccagcgagtcatcgaggac
cgtgattctcaactccgcagtcaagcccgggccctgattacctttgctgggatgataccc
taccggacgtctggggacaccaatgcgaggctggtgcagatggaggtcctcatgaattaa
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