Sus scrofa (pig): 100626058
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Entry
100626058 CDS
T01009
Symbol
TBC1D5
Name
(RefSeq) TBC1 domain family member 5 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100626058 (TBC1D5)
Membrane trafficking [BR:
ssc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100626058 (TBC1D5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
TFIIA
RabGap-TBC_2
VPS13_N
Med3
DUF3452
DDHD
DUF6775
TFB6
SWI-SNF_Ssr4_C
TMEM51
Motif
Other DBs
NCBI-GeneID:
100626058
NCBI-ProteinID:
XP_020925338
Ensembl:
ENSSSCG00000011199
LinkDB
All DBs
Position
13:complement(4191544..4738448)
Genome browser
AA seq
806 aa
AA seq
DB search
MYHSLSETRHPLQPEEQEVGIDPLSSYLNKPGGDSNQNGRRTSSTLESDGTFNSYRKEWE
ELFVNNNYLATIRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISRIKELRAWYSNVK
EIHITNPRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQE
NVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFTLHCDHQAFLHASESAQPSEEMKTL
LNPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKETLMPPIPFARPQDLGPTIAIVTK
VNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGL
SLSLVDYIFIAMLLYIRDALISSNYQTCLGLLMHYPLIGDVHSLILKALFLRDPKKNPRP
VTYQFHPNLDYYKARGADLMNKSRTNAKGAPLNINKVSNSLINFGRKLISPAMVPSGTGG
PVPGGSGAASSPAVVPTRTLAEAPRHPLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQR
LMKSESMPVQLNKGQSSKNISSSPSIESLPGGREFTGSPPSSATKKDSFFSSISRSRSHS
KTMGRKESEEELEAQISFLQGQLNDLDAMCKYCAKVMDTHLVNIQDVILQENLEKEDQIL
VSLAGLKQIKDILKGSLRFNQSQLEAEENEQITISDDHYCSSGQGHVPGATKQTPSAAQG
RTERGGPDDFILVSKDDDGGSTRAPAPGQAQPLRLLRSLARPALVFSDPLTGPASAPSSN
PSSSPDDDSSGHSKDSGFTIVSPLDL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtatcattccttatctgaaactagacatcctctgcagccagaagaacaagaagtgggc
attgatcctttgtctagctacttaaacaagcctggaggagattcaaatcaaaatggaaga
agaacaagttctactttagagtctgatgggacttttaattcctataggaaagaatgggaa
gaactctttgtaaacaacaattacttggcaacaataaggcagaaggggattaatgggcag
ctgagaagcagcaggttccgcagcatttgctggaagctctttctttgtgttcttcctcaa
gataaaagtcaatggataagtagaattaaagaattaagagcatggtatagcaacgttaaa
gaaatacatatcacaaacccgaggaaagttgttggccagcaggacttgatgatcaataat
cccctttcccaggatgaagggagtctttggaacaaattcttccaagataaagaacttcgg
tcaatgatcgaacaggatgtcaaaagaacgtttcctgaaatgcagtttttccaacaagaa
aatgtgagaaaaattcttacagatgttcttttctgttatgctagagagaacgagcagttg
ctttataaacagggcatgcacgagctgctggcgcccatagtcttcaccctccactgtgac
caccaagcctttcttcacgccagtgagtctgcacaaccaagtgaggaaatgaaaactctc
ttgaaccctgagtacctggaacatgatgcctatgcaatgttctcacaacttatggaaact
gctgaaccttggttttctacttttgagcatgatggtcaaaaggggaaagaaaccctgatg
cctcctattccctttgctagaccgcaggatttgggaccaacaattgctattgttactaaa
gtcaaccagatccaggatcatctactgaagaagcatgatatagagctttacatgcacctc
aacagactagaaattgcgccacagatatatgggctacggtgggttcggctgctgtttgga
cgagagttccccctgcaggaccttctggtggtctgggatgccttgttcgcagatggcctc
agcctgagtttagttgattatatcttcatagccatgttgctctacatccgagatgctctg
atctctagtaactaccagacttgtcttggccttctgatgcattacccgctaattggggat
gttcactcactgattcttaaggctctgttccttcgagatccaaagaaaaacccaagacca
gtgacttaccaattccatccaaatttagattattacaaagcacgaggagcagacctcatg
aataaaagccggaccaatgccaaaggcgctcccctgaatataaacaaggtctctaatagc
ctgattaattttggaagaaaactgatttctccagcgatggtcccaagtggtacaggtggc
cctgtaccaggaggtagtggggccgcttcctccccagccgtggttcccaccaggaccttg
gcagaggctcccaggcaccctttgcagcaacagcagcagcagcagcagcagcagcagcag
cagcagcagcaacagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcgg
ctgatgaaatcggaaagcatgccagtgcaactgaacaaaggacaaagttctaaaaacatc
agttcatctccaagtattgagagtctgcctggaggaagggagtttacaggctccccacca
tcatctgctactaaaaaggactcctttttcagcagcatctcccgttcccgctcacacagc
aaaactatgggcagaaaagaatctgaagaagaattagaagcccaaatttccttccttcaa
ggacagttgaatgacctagatgccatgtgcaaatactgtgcaaaggtgatggacactcat
cttgtaaatattcaagatgtgatattacaagaaaatttagaaaaagaagatcaaattctg
gtttccctggcaggattaaagcagatcaaagacattctaaaaggttccctgcgtttcaac
caaagccagctggaggccgaggagaatgagcagatcaccatctccgatgaccactactgc
tccagtggccagggccatgtgcctggggccaccaagcagaccccttcagcagcgcagggg
cgcacagagagaggtggcccggacgacttcatcctcgtctccaaggatgacgacgggggc
agcaccagggcgcccgcacccggccaagcgcagcccctacggctcctcaggagcttggcc
cgccccgccctggttttctcagacccgctgactggtccggcttcggccccctccagcaac
cccagttccagccccgatgacgacagcagcggccacagcaaggactcgggcttcaccatt
gtgagccccctggacctctga
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integrated database retrieval system
