Sus scrofa (pig): 100626275
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Entry
100626275 CDS
T01009
Symbol
CDX1
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100626275 (CDX1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100626275 (CDX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
HTH_NDX
YdaS_toxin
DUF7645
Motif
Other DBs
NCBI-GeneID:
100626275
NCBI-ProteinID:
XP_003354406
Ensembl:
ENSSSCG00000014445
ENSSSCG00000023417
UniProt:
A0A480JPE6
A0A8D0T324
LinkDB
All DBs
Position
2:151202842..151217132
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AA seq
263 aa
AA seq
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MYVGYVLDKDAPGYPGPTRPAGLGLGPPAYGPPPPGPPQYPDFTGYLHVDPGPGPPAAWS
TPFSAPKDDWAAAYGPGPAAPAASPAPLAFGPPPDLSAVPAPPGPGPGLLAQPLGGPGAP
PSPGAQRRTPYEWMRRSVAAGSGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIR
RKSELAANLGLTERQVKIWFQNRRAKERKVNKKQQPPPPPQPPPAAHDVTPSPAGPPXGG
LCPNSASLLGASSPVPVKEEYRA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggctatgtgctggacaaggatgcccccgggtaccccggccccaccaggccc
gccggtctcggcctgggcccgccagcctacggccccccgcccccggggccccctcagtac
cccgacttcaccggctacttgcacgtggacccgggccccgggccccctgcggcctggagc
acgcccttctccgcgcccaaggacgactgggccgccgcctacggcccgggccccgcagcc
cccgccgccagcccggccccgctggcattcgggccccctccggacttgagcgcggtgccc
gcgcccccggggcccggcccaggcctcctggcgcagcccctgggcggccccggcgcaccg
ccgtcgcccggagcgcagaggcggacgccctacgagtggatgcgacgcagtgtggcggct
ggaagcggcggtggcagcggtaagacccggaccaaggacaagtaccgcgtggtctacacc
gaccaccagcgcctggagctggagaaggaattccactacagccgctatatcaccatccgg
cggaagtcggagctggccgccaatctggggctcaccgaacgtcaggtgaagatctggttc
caaaaccggcgggcaaaggagcgcaaagtgaacaagaagcagcagccgccgccgcctcca
cagccacccccagcagcccacgatgtcaccccctctccagctgggccacccnctgggggc
ctgtgccccaactccgccagcctcctgggcgcctcctccccagtgcctgtcaaagaggag
tatcgggcctag
DBGET
integrated database retrieval system
