Sus scrofa (pig): 100626466
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Entry
100626466 CDS
T01009
Symbol
LARP4
Name
(RefSeq) la-related protein 4 isoform X3
KO
K18763
la-related protein 4
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100626466 (LARP4)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100626466 (LARP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
SET_assoc
Motif
Other DBs
NCBI-GeneID:
100626466
NCBI-ProteinID:
XP_003355433
Ensembl:
ENSSSCG00000028516
Vega:
OTTSUSG00000001944
LinkDB
All DBs
Position
5:16177245..16353548
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AA seq
725 aa
AA seq
DB search
MLLFVEQVTSKGTGLNPNAKVWQEIPPGNTDTTPVTHGTESSWHETAATSGSHPEGNREL
SNDMCKEYEIMYSSCETTRNTPGIEESTDGMILGPEDLNYQIYDVSGESNSAISTEDLKE
CLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSP
MVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKALFKNENCPKVISCEFAHNSNWYIT
FQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRLMDSTMYSQPIQTQAQY
ASPVFMQPVYNPHQQYSVYSIVPQSWSPNPAPYFETPLAPFPNGSFLNGFNSPGSYKTSA
AAAVNMGRPFQKNRVKPHFRSSGGSEHSTEGSVSLGDGPLNRSGSRNFPNERHNPTVTGH
QEQSYLPKETPTLQTEQNGDYGRGRRTLFRGRRRREDERVPRPHPSTAEAKAPTPKFDLL
ASNFPPLPGSSSRTPGELVLESRMSDVVKGVYKDKDNEELRVICPVPAEDEQTDCTSAQQ
LSTSTSPPCAAELSALSTTQQEKDLIEDSAVQKDVPNQTTIPASSPSTAKPSRTSTASSC
HSNVNAAAAVALQEPRKLSYAEVCQKPPKEPSPVLVQPLRELRSNAVSPTKNEENGAAEK
STEKSNEKPEARASKDYSGFRGNAIPRGTAGKIREQRRQFGHRAIPQGVTRRNGKEQYVP
PRSPK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcttcgtggagcaggtaacttctaaaggaactggtttaaatcctaatgccaaa
gtatggcaagaaatacctccaggaaacactgataccactccagttactcatggaactgaa
agctcttggcatgaaacagcagccacatcagggtctcatcctgagggtaatagagagctt
tcaaatgatatgtgtaaggagtatgaaataatgtattcatcttgtgaaactacaagaaat
actccaggcattgaagaatcaaccgatggaatgattttaggaccagaagatctgaactat
caaatatatgatgtttctggagagagcaactcagcaatttctacagaagacctgaaagaa
tgtctgaagaaacaattagaattctgtttctcacgagaaaatttgtcaaaagatctttac
ctgatatctcaaatggacagtgatcagttcatcccaatctggacagttgccaacatggaa
gaaataaaaaaactgaccacagaccctgacctaattcttgaagtgttgagatcttctccc
atggtacaagttgatgagaagggtgagaaagtacgaccaagtcataagcgttgtattgtg
attcttagagagattcctgaaacaacaccgatagaggaagtaaaagctttgtttaaaaat
gaaaactgtcccaaggtgataagctgcgagtttgcacacaatagcaactggtatatcact
ttccagtcagacacagacgcacagcaggcttttaaatacttgagagaagaagttaaaaca
tttcagggcaagccaattatggcaaggataaaagccattaatactttttttgctaaaaat
ggttatcgcttaatggattctactatgtatagtcagcccattcaaactcaagcacagtat
gcctcaccagtctttatgcagcctgtatataatcctcaccaacagtactctgtttatagt
attgtgcctcagtcttggtctccaaatcctgcaccttactttgaaacaccactggctcct
tttcccaatggtagttttctgaatggctttaattcaccgggatcttataaaacaagtgct
gctgctgctgtgaacatgggtcgaccattccaaaaaaatcgtgtgaagcctcattttagg
tcatcaggtggttcagaacattcaacagagggctctgtgtcattgggggatggaccattg
aacagatctggttcaaggaactttccaaatgaacgacataaccccacagtaacagggcat
caggagcaaagctaccttccaaaggagactcccactttgcagacggagcagaatggggac
tatggaaggggcaggagaactcttttcagaggtcgaagacgacgggaagatgaaagagtc
ccaagaccccatccttcaacagctgaagcaaaggctccaacaccaaagtttgacttatta
gcctcaaattttcctcctttacctggaagttcatcaagaacaccaggtgaacttgttttg
gagagtagaatgtctgatgttgttaaaggagtctacaaagataaggataatgaagagttg
agagtgatttgcccagtgcctgcagaggatgaacagacagactgcacctctgcccagcaa
ctcagtacaagtaccagtcctccatgtgcagctgagctttctgcattaagcacaactcag
caagaaaaggatctaatagaggattctgctgttcagaaggatgttcccaaccagacaact
ataccagcttcttccccgagtactgcaaagccatcaagaacaagcactgcttcgtcatgt
catagtaacgtaaatgcagctgcagctgtggccctccaggaaccccgaaagctaagttac
gctgaagtgtgccagaagccccctaaggagccatctccagtccttgtgcagccactacga
gaacttcgctccaatgcagtatctcccaccaaaaatgaagagaacggagctgctgagaag
tccactgagaaatcaaatgagaagccagaagcaagggctagtaaggattactctggcttc
cgaggcaatgccattcctaggggaacagctggaaaaatcagggaacagagacgccagttt
ggccatagggctatacctcagggagtgactcgacgtaatggcaaagagcaatatgtgcca
cccagatcaccaaagtaa
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