Sus scrofa (pig): 100626520
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Entry
100626520 CDS
T01009
Symbol
NKX2-2
Name
(RefSeq) homeobox protein Nkx-2.2 isoform X1
KO
K08029
homeobox protein Nkx-2.2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
100626520 (NKX2-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100626520 (NKX2-2)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
100626520 (NKX2-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100626520
NCBI-ProteinID:
XP_003359963
Ensembl:
ENSSSCG00000023580
UniProt:
A0A287BDA9
A0A4X1V3H7
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Position
17:complement(29275656..29279572)
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AA seq
273 aa
AA seq
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MSLTNTKTGFSVKDILDLPDTNDEEGSVAEGPEEESEGREPAKRAGPLGPGALDTVQSLP
LKNPFYDSSDNPYTRWLASTEGLQYSLHGLAAGAAPQDSSSKSPEPSADESPDNDKETPG
GGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHR
YKMKRARAEKGMEVTPLPSPRRVAVPVLVRDGKPCHALKAQDLAAATFQAGIPFSAYSAQ
SLQHVQYNAQYSSASNPQYPTAHPLVQAQQWTW
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaccaacacgaagacggggttttcggtcaaggacatcttggacctgccagac
accaacgatgaggagggctcggtggccgaagggcccgaggaggaaagtgaggggcgggag
cccgccaagagggccgggccgctggggccgggcgccctggacaccgtgcagagcctgccc
ctgaaaaaccccttctacgacagcagcgacaacccgtacacgcgctggctggccagcacc
gaaggtctccagtactccctgcatgggctggcggccggcgcggcaccccaagactcgagt
tccaagtccccggagccctcggccgacgagtcaccggacaacgacaaggagaccccaggc
ggcggaggggacgccggcaagaagcggaagcggcgggtgctcttctccaaggcgcagacc
tacgagctggagcggcgcttccggcagcagaggtacctgtcggcccccgagcgggagcac
ctggccagcctcatccgcctcacgcccacgcaagtcaagatctggttccagaaccaccgc
tacaagatgaagcgcgcccgggcagagaaaggtatggaggtgacgcccctgccctcgccg
cgccgggtggccgtgcccgttttggtcagggacggcaaaccgtgccacgcgctcaaagcc
caggacctggcagctgccaccttccaggcgggcatccccttttcggcctacagcgctcag
tctctgcagcacgtgcaatacaacgcccagtacagctcggccagcaacccccagtacccg
acagcacaccccctggtccaggcccagcagtggacttggtga
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