Sus scrofa (pig): 100626544
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Entry
100626544 CDS
T01009
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100626544 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100626544 (SPTBN4)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100626544 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
100626544 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
Rv3651-like_N
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
100626544
NCBI-ProteinID:
XP_020950053
LinkDB
All DBs
Position
6:48729839..48812799
Genome browser
AA seq
2564 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNPTARWESPDRGWEREQPAASTVAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGRIMERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALATEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEAEDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGAGAAGAAGAAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALR
RGEELAAAGGAVGPGAETVRLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGA
DLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLASLG
GASGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEK
EQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVRS
CQDHLNSRWNRIVELVEQRKEEVSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGAL
QWRLSGLEAALQALEPRQAALLEEAALLAVRFPAQAARLQQGAEELGAEWGALASAAQAC
GEAVAAAGRLQRFLHDLDAFLDWLVRAQETAGGGEGPLPGSLEEADALLARHAALKEEVD
RREEDYARIVAASEALLAGDGGELGPGLALDEWLPHLELGWHKLLGLWDVRREALVQAHV
YQLFLRDLRQARAVLRNQEVALSGLDLPGTVESVEEALKRHRNFLTTMELNQQKMQVAVQ
AAESLLRQGNAYGEQAQEAVALLLEKSQENQLRAQQWMQKLHDQLGLQHFLRDCHELDGW
IHEKMLMARDGTREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAAS
VRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPGG
DLATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRL
LEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLALQTERGNGLQAVQQYIKKNQGL
RREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGQEQLQGAWAGLREAAERRQQVLDAA
FQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQL
SRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDELE
HWIAEKEVVAGSPELGQDFEHVTVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHT
AAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRL
TAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEV
LQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVL
MNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSDKWDRH
WEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAW
EERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPAELAAKAAPLLRPGGYERGLEPL
ARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPDVPGRVEPAALPAAPEDAAETPGA
PAAAEQVRPRPERQESADRAEELPRRRRPERQESADQSEEAARRRRPERQESADHEVAHS
LTLGRYEQMERRRERRERRLERQESSEQEMPIRGDLAKGKATLADIVEQLQEKEAGPGLP
VGPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRS
APAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDA
KGPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLE
AVAASVAEHAEIARWSQTAPTTSSTDEGNPKREAGERRASGRRK
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtaccaggggaagtggataacatggaggggctaccagccccgaacaataac
aaccctacagcccgctgggagagtcccgatcggggctgggagcgggagcaaccagcagcc
tccaccgtggctgcctcgctctttgagtgttcccggatcaaggccttggcagatgagcgg
gaggccgtgcagaagaaaaccttcactaagtgggtgaactcccacctcgcccgagtcggc
tgccacatcggggacctctacgcggacctcagggacggctttgtgctcacgcggctcctg
gaagtgctgtccggggagcagctgccaaggcccacacgtggtcgcatgaggatccactcg
ctggaaaatgtggacaaggcactgcagttcctgaaggagcagcgcgtgcacctggagaac
gtgggctcgcatgacatcgtggacgggaaccaccggctgaccctggggctggtctggact
atcattctgcgcttccagattcaagtcatcaaaatcgagactgaggacaacagggagact
cgctcagccaaggatgcactgctcttgtggtgtcagatgaagacggctggttaccctgag
gtcaacatccagaatttcaccaccagctggcgggacggcttggccttcaatgccctcatt
caccggcacaggcctgatctcgtggacttcagcaaactcaccaagtccaatgccaactac
aacctgcagagagccttccgcacagctgagcagcacctggggctggcacgcctgctggat
cctgaggatgtaaacatggaggctccagatgagaagtccatcatcacctatgtggtctcc
ttctaccactatttctccaagatgaaggctctggccgtggaggggaagcggattgggaag
gtgctggaccaggtgctggaggtgggcaggatcatggagcgctatgaggagctggcggcc
gagctgctggcctggatccatcgcaccgtgggcctcatcagcaaccagaagtttgccaac
tccttgagtggggtgcagcagcagcttcaggctttcacggcctattgcacactggagaag
cctgtcaagttccaggagaaggggaacctggaggtgctgctcttcagcatccagagcaaa
ttgcgtgcctgcaaccgtcgtctctttgtgccccgggaaggctgcggcatctgggatatc
gacaaggcatggggccagctggagaaggcagaacatgagcgggaggctgccctacgggcc
gagctgatccggcaggagaagctggaactcctggcccagaggtttgaccacaaggtggct
atgcgggagagctggctgaatgagaaccagcgcctggtgtcccaggacaactttgggtat
gagctgccagcagtggaggcagccatgaagaagcatgaagcgattgaggcagacattgca
gcctatgaggagcgggtgcagggcgtggcggagctggcccaggcattggcgactgaaggc
tactatgatgcccgccgggtggcagcccagcgtgacagtgtcctgcgccagtgggccctg
ctgactgggctggtaggtgcccggcggacacgactcgagcagaacctggccctgcagaaa
gtcttccaggagatggtgtacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggagtgtgggcagcacctggtggaggctgaggacctgttgcagaagcatggactg
ctggagggggacatcgcggcccagagtgagcgggtggaggctctcaacgctgctgccctg
cgtttctcccagctgcagggttaccagccctgcgatccgcaggtcatctgcaaccgtgtg
aaccacgtgcacggctgtctggcggagctgcaggagcaggcggcgaggcggcgcgcggag
ctggaggcctcgcgcagcctgtgggctctgctgcaggagctggaggaggccgagagctgg
gcccgtgacaaggagcgcctcctagaggcggcgggcggcggcggtgcgggcgcggcgggc
gcggcgggagcggcgggcggtgcacacgacctgtccagcaccgcgcgcctcctggcacag
cacaagatccttcagggcgagctgggagggcggcgggcgctgctgcagcaggccctgcgg
cgtggcgaggagctggccgcggctggtggcgccgtgggcccgggcgccgagacggtgcgg
ctagccggcctggcggagcgcgcggcgagcgcgcggcggcgctggcagcggctggaagag
gcggcggcgcggcgcgaacggcggctgcaggaagcacgggcgctgcaccagtttggcgct
gatctcgacggcctcctggactggcttcgcgacgcctatcgcctagcagccgcgggcgat
ttcggccacgacgaggcatccagccgccgcctggcccgccaacaccgcgcgctcaccggg
gaggtggaggcgcatcgggggccggtgggcggcctgcggcgtcagctcgcgtccctgggg
ggcgccagtggcgccgggccactggtggtggccctgcaggttcgcgtggtagaggccgag
cagctcttcgccgaggtgactgaggtggctgccctgcggcgccagtggcttcgggatgcc
ctcgctgtctaccgcatgttcggggaggtgcacgcgtgtgagctgtggatcggtgagaag
gagcagtggctgctcgccatgcgtgtgcccgattcactcgacgacgtcgaggtggtgcag
caccgatttgagagtctggaccaggagatgaatagtctgatgggccgtgtcctggacgtg
aaccatacggtccaagagctggtggaaggaggtcatcccagctcagatgaggtgcgctcc
tgtcaggaccatctcaacagcaggtggaaccgcatcgtggagctggtggaacagcgcaaa
gaggaggtgagcgcagtgctgctggtggagaaccacgtgctggaggtggcggaggtgcgc
gcccaggtgcgggagaagcggagggcggtggagagcgcgccccgcgccggcggcgccctg
cagtggcgccttagcggcctggaggccgctctgcaagcgctagagccgcgccaggcggcc
ctcctggaggaggcggccctgctggctgtgcgcttcccggctcaggctgcgaggctgcag
cagggtgcggaggaactgggcgctgagtggggcgctctggccagcgcggctcaggcctgt
ggcgaggcggtggcagcggctgggcgcctgcagcgcttcctgcacgacctggacgctttc
ctggactggctggtgcgggcccaggagacggcgggcggcggcgaggggcccctgcccggc
agcctggaagaggcggacgcgctgctggcgcgccacgccgcgctcaaggaggaagtggac
cggcgcgaagaggactatgcgcgcatcgtggcggccagcgaagcgctgctggcgggcgac
ggcggcgagctgggcccaggcctggcgctcgacgagtggctgccgcacctcgaacttggt
tggcacaagctgctcggcttgtgggacgtgcgcagggaggcgttggtccaggcgcacgtc
taccagctctttctgcgagacctacgccaggcgcgcgccgtgctgcgcaaccaggaggtg
gcactgtcagggctggatctgcccggcaccgtggagtcggtggaggaggcattgaaacgg
caccggaattttctgaccacgatggagctgaaccagcagaagatgcaggtggccgtacag
gctgccgagagcctgctgaggcagggcaatgcctacggggagcaggcccaggaggccgtg
gctctgctgctggagaagagccaagaaaaccaactacgggcccaacaatggatgcagaag
cttcacgaccaacttgggctgcagcacttcctccgagactgccacgagctggatggctgg
atccatgagaagatgctgatggcgcgggacggcactcgggaagacggccacaagctgcat
aagagatggctccggcaccaggcattcatggccgagctggctcagaataaggagtggctg
gagaagattgagagggagggccagcaactgatgcaagagaaaccggagctggcagcctcg
gtgcgaaaaaagctgggagagatccggcagtgctgggcagagctggagagcaccacccag
gccaaggccaggcagctctttgaagccagcaaggccgaccagctggttcagagcttcgcc
gaactggataagaagctccttcacatggaaagccagctacaagacgtggaccccggaggg
gacctggccaccgtcaatagccaactcaagaagctgcagtcgatggagtcgcaggtggag
gagtggtaccgcgaggtgggagagttgcaggcgcagaccgcggcgctgcctctggagccg
gcgagcaaggagctggtgggcgagcggcagaacgcggtgggcgagcgcctggtgcgtctg
ctcgagccgctgcaggagcgccgccgcctgctgctcgcctccaaggagctgcaccaggtg
gcgcacgacctcgacgatgagctggcgtgggtccaggagcggctgccactggccctgcag
acagagcgaggcaatggtttgcaggccgtccagcagtacatcaaaaagaatcagggcctg
cggcgggagatccaggcgcacgggccgcgcctggaggaggtgctggagcgggcgggcgcc
ctggcgtcgctgcgcagccccgaggcggaggccgtgcgccgcggccaggagcagctgcag
ggcgcctgggccgggctgcgggaggcggccgagcggcggcagcaggtgctggacgccgcc
ttccaggtggagcagtactacttcgacgtggccgaggtggaggcgtggctgggcgagcag
gagctgctcatgatgagtgaggacaagggcaaggacgaacagagtaccctgcagctgctc
aagaagcacctgcagctggagcagggcgtggagaactacgaggaaagcatcgcacagctg
tcgcgccagtgccgggcgctgctggagatggggcacccggacagcgagcagatcagccgg
cggcagtcgcaggtggaccgcctgtacgtggcgctcaaggagctgggcgaggaacgccgc
gtgggcctggagcagcagtactggctgtaccagctcagccgccaggtggacgagctggag
cactggatcgcagagaaggaggtggtggctggctcccccgaactcggccaggactttgag
cacgtcacggtgctgcaagagaaattctcggagttcgccagtgagaccggcacggcaggg
cgggagcggctggcagccgtgaaccagatggtggacgagctgatcgagtgtggccatacg
gcggcggccaccatggccgagtggaaggacgggctgaatgaggcctgggccgagctgctg
gagcttatgggcacgcgggcccagctgctggccgcctctcgggagctgcataagttcttc
agtgatgcccgagagcttcaaggacagatcgaggagaagcggaggcgactgccccgccta
acagccccacctgagccgagacccagtgccagctccatgcagcggaccctgcgcgccttt
gaacatgacctgcagctcctcgtgtcccaggttcggcagctccaggagggggccgcccaa
ctgcggacggtgtacgccggtgagcacgcggaggccatcgccagccgggagcaggaggtg
cttcagggctggaaggagctgctggcagcctgcgaggacgcccgcctgcacgtgagctcc
acggccgacgccctgcgattccacagccaggcccgcgacctgctctcctggatggatggc
atcgctggccagattggggcagctgacaagcccagggacgtgtcgtcggtggaggtgctc
atgaactaccaccagggcctgaagactgagctggaggcacgggtgcctgagctgacagcc
tgccaggagctggggcgctctctgctgctcaacaagagtgccatggctgatgagatccag
gcacagctggacaagctgggaaccaggaaggaggaggtgtcggacaagtgggaccgccat
tgggagtggctgcagcagatgctggaggtgcaccagtttgcccaggaggcggtggtggcc
gatgcctggctgacagcccaggagccgctcctgcagagccgggagctgggcagcagcgtg
gacgaggtggagcagcttatccggcgacacgaggccttccgtaaagcggctgctgcctgg
gaagagaggttcagctctctgcggcgcctgaccacgatcgagaaactcaaggcggaacag
agcaagcagccgcccacacccctgctggggcgcaagttctttggagaccctgcggaactg
gcggccaaggctgcgcccctgctgcggccagggggctacgagaggggcttggagccccta
gcccgccgggcctcagacacgctgtcggccgaggtgcggacccgggtggggtacgtgcgc
caggagctcaagcccgagcgcctccagccgcgcatcgaccggctgccggacgtcccaggg
agagtggagcccgccgccctgccagccgcaccggaggacgcggcggagacccctggggcc
cccgcagccgcggagcaggtccggccgcggccagagcgccaggagtcagccgatcgcgcg
gaggagttgcccaggaggcggcggcctgagcggcaggaatcggctgatcaatctgaggag
gctgcgcggaggcggcggccagagcggcaggagtccgcggatcacgaggtagcacatagc
cttactctgggccgctacgagcagatggagcggcggcgcgagcggcgggagcggcggttg
gagcggcaggagtccagcgagcaagagatgcctatcagaggagacctggccaaggggaag
gccaccctggctgacattgtggagcagctgcaggagaaagaggcaggacccgggctccct
gttgggccgtcgctgcctcagcctcgggagcttccccccggccgcctgcccaacgggctt
gagccgcccgagcggacacctcggccagaccggccgcgggctcgggaccggcccaagccg
cgacggcggccgcggcccagagagggtggtgagggcgggggaagccggcgctcgcgctcc
gccccggcccaaggcggctccgcccccgcgcctcctcctccgcccactcacacagtgcag
cacgagggcttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccgg
tcatgggtgagcctgtactgcgtgctcagcaagggggagctgggcttctacaaggatgcc
aagggcccagcatctgggggcacacacggcggggagccactgctcagcctgcacaaggcc
accagcgaggtggctagtgactacaagaaaaagaagcacgtcttcaagctccagacccag
gatggcagtgagttcttgcttcaggctaaagatgaggaagaaatgaacggctggctggag
gctgtggctgcctcggtggcggaacacgccgagatcgcccgctggagccagacagcgccc
accacgtcgtccacagacgagggcaaccccaagcgggaggcaggggagcgcagagccagt
gggcgccggaagtga
DBGET
integrated database retrieval system
