Sus scrofa (pig): 100626544
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Entry
100626544 CDS
T01009
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04517
IgSF CAM signaling
ssc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100626544 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100626544 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100626544 (SPTBN4)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100626544 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
100626544 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
Rv3651-like_N
DUF7854
RASSF_helical
PH_11
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
100626544
NCBI-ProteinID:
XP_020950053
LinkDB
All DBs
Position
6:48729839..48812799
Genome browser
AA seq
2564 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNPTARWESPDRGWEREQPAASTVAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGRIMERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALATEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEAEDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGAGAAGAAGAAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALR
RGEELAAAGGAVGPGAETVRLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGA
DLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLASLG
GASGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEK
EQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVRS
CQDHLNSRWNRIVELVEQRKEEVSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGAL
QWRLSGLEAALQALEPRQAALLEEAALLAVRFPAQAARLQQGAEELGAEWGALASAAQAC
GEAVAAAGRLQRFLHDLDAFLDWLVRAQETAGGGEGPLPGSLEEADALLARHAALKEEVD
RREEDYARIVAASEALLAGDGGELGPGLALDEWLPHLELGWHKLLGLWDVRREALVQAHV
YQLFLRDLRQARAVLRNQEVALSGLDLPGTVESVEEALKRHRNFLTTMELNQQKMQVAVQ
AAESLLRQGNAYGEQAQEAVALLLEKSQENQLRAQQWMQKLHDQLGLQHFLRDCHELDGW
IHEKMLMARDGTREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAAS
VRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPGG
DLATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRL
LEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLALQTERGNGLQAVQQYIKKNQGL
RREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGQEQLQGAWAGLREAAERRQQVLDAA
FQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQL
SRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDELE
HWIAEKEVVAGSPELGQDFEHVTVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHT
AAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRL
TAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEV
LQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVL
MNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSDKWDRH
WEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAW
EERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPAELAAKAAPLLRPGGYERGLEPL
ARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPDVPGRVEPAALPAAPEDAAETPGA
PAAAEQVRPRPERQESADRAEELPRRRRPERQESADQSEEAARRRRPERQESADHEVAHS
LTLGRYEQMERRRERRERRLERQESSEQEMPIRGDLAKGKATLADIVEQLQEKEAGPGLP
VGPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRS
APAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDA
KGPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLE
AVAASVAEHAEIARWSQTAPTTSSTDEGNPKREAGERRASGRRK
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtaccaggggaagtggataacatggaggggctaccagccccgaacaataac
aaccctacagcccgctgggagagtcccgatcggggctgggagcgggagcaaccagcagcc
tccaccgtggctgcctcgctctttgagtgttcccggatcaaggccttggcagatgagcgg
gaggccgtgcagaagaaaaccttcactaagtgggtgaactcccacctcgcccgagtcggc
tgccacatcggggacctctacgcggacctcagggacggctttgtgctcacgcggctcctg
gaagtgctgtccggggagcagctgccaaggcccacacgtggtcgcatgaggatccactcg
ctggaaaatgtggacaaggcactgcagttcctgaaggagcagcgcgtgcacctggagaac
gtgggctcgcatgacatcgtggacgggaaccaccggctgaccctggggctggtctggact
atcattctgcgcttccagattcaagtcatcaaaatcgagactgaggacaacagggagact
cgctcagccaaggatgcactgctcttgtggtgtcagatgaagacggctggttaccctgag
gtcaacatccagaatttcaccaccagctggcgggacggcttggccttcaatgccctcatt
caccggcacaggcctgatctcgtggacttcagcaaactcaccaagtccaatgccaactac
aacctgcagagagccttccgcacagctgagcagcacctggggctggcacgcctgctggat
cctgaggatgtaaacatggaggctccagatgagaagtccatcatcacctatgtggtctcc
ttctaccactatttctccaagatgaaggctctggccgtggaggggaagcggattgggaag
gtgctggaccaggtgctggaggtgggcaggatcatggagcgctatgaggagctggcggcc
gagctgctggcctggatccatcgcaccgtgggcctcatcagcaaccagaagtttgccaac
tccttgagtggggtgcagcagcagcttcaggctttcacggcctattgcacactggagaag
cctgtcaagttccaggagaaggggaacctggaggtgctgctcttcagcatccagagcaaa
ttgcgtgcctgcaaccgtcgtctctttgtgccccgggaaggctgcggcatctgggatatc
gacaaggcatggggccagctggagaaggcagaacatgagcgggaggctgccctacgggcc
gagctgatccggcaggagaagctggaactcctggcccagaggtttgaccacaaggtggct
atgcgggagagctggctgaatgagaaccagcgcctggtgtcccaggacaactttgggtat
gagctgccagcagtggaggcagccatgaagaagcatgaagcgattgaggcagacattgca
gcctatgaggagcgggtgcagggcgtggcggagctggcccaggcattggcgactgaaggc
tactatgatgcccgccgggtggcagcccagcgtgacagtgtcctgcgccagtgggccctg
ctgactgggctggtaggtgcccggcggacacgactcgagcagaacctggccctgcagaaa
gtcttccaggagatggtgtacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggagtgtgggcagcacctggtggaggctgaggacctgttgcagaagcatggactg
ctggagggggacatcgcggcccagagtgagcgggtggaggctctcaacgctgctgccctg
cgtttctcccagctgcagggttaccagccctgcgatccgcaggtcatctgcaaccgtgtg
aaccacgtgcacggctgtctggcggagctgcaggagcaggcggcgaggcggcgcgcggag
ctggaggcctcgcgcagcctgtgggctctgctgcaggagctggaggaggccgagagctgg
gcccgtgacaaggagcgcctcctagaggcggcgggcggcggcggtgcgggcgcggcgggc
gcggcgggagcggcgggcggtgcacacgacctgtccagcaccgcgcgcctcctggcacag
cacaagatccttcagggcgagctgggagggcggcgggcgctgctgcagcaggccctgcgg
cgtggcgaggagctggccgcggctggtggcgccgtgggcccgggcgccgagacggtgcgg
ctagccggcctggcggagcgcgcggcgagcgcgcggcggcgctggcagcggctggaagag
gcggcggcgcggcgcgaacggcggctgcaggaagcacgggcgctgcaccagtttggcgct
gatctcgacggcctcctggactggcttcgcgacgcctatcgcctagcagccgcgggcgat
ttcggccacgacgaggcatccagccgccgcctggcccgccaacaccgcgcgctcaccggg
gaggtggaggcgcatcgggggccggtgggcggcctgcggcgtcagctcgcgtccctgggg
ggcgccagtggcgccgggccactggtggtggccctgcaggttcgcgtggtagaggccgag
cagctcttcgccgaggtgactgaggtggctgccctgcggcgccagtggcttcgggatgcc
ctcgctgtctaccgcatgttcggggaggtgcacgcgtgtgagctgtggatcggtgagaag
gagcagtggctgctcgccatgcgtgtgcccgattcactcgacgacgtcgaggtggtgcag
caccgatttgagagtctggaccaggagatgaatagtctgatgggccgtgtcctggacgtg
aaccatacggtccaagagctggtggaaggaggtcatcccagctcagatgaggtgcgctcc
tgtcaggaccatctcaacagcaggtggaaccgcatcgtggagctggtggaacagcgcaaa
gaggaggtgagcgcagtgctgctggtggagaaccacgtgctggaggtggcggaggtgcgc
gcccaggtgcgggagaagcggagggcggtggagagcgcgccccgcgccggcggcgccctg
cagtggcgccttagcggcctggaggccgctctgcaagcgctagagccgcgccaggcggcc
ctcctggaggaggcggccctgctggctgtgcgcttcccggctcaggctgcgaggctgcag
cagggtgcggaggaactgggcgctgagtggggcgctctggccagcgcggctcaggcctgt
ggcgaggcggtggcagcggctgggcgcctgcagcgcttcctgcacgacctggacgctttc
ctggactggctggtgcgggcccaggagacggcgggcggcggcgaggggcccctgcccggc
agcctggaagaggcggacgcgctgctggcgcgccacgccgcgctcaaggaggaagtggac
cggcgcgaagaggactatgcgcgcatcgtggcggccagcgaagcgctgctggcgggcgac
ggcggcgagctgggcccaggcctggcgctcgacgagtggctgccgcacctcgaacttggt
tggcacaagctgctcggcttgtgggacgtgcgcagggaggcgttggtccaggcgcacgtc
taccagctctttctgcgagacctacgccaggcgcgcgccgtgctgcgcaaccaggaggtg
gcactgtcagggctggatctgcccggcaccgtggagtcggtggaggaggcattgaaacgg
caccggaattttctgaccacgatggagctgaaccagcagaagatgcaggtggccgtacag
gctgccgagagcctgctgaggcagggcaatgcctacggggagcaggcccaggaggccgtg
gctctgctgctggagaagagccaagaaaaccaactacgggcccaacaatggatgcagaag
cttcacgaccaacttgggctgcagcacttcctccgagactgccacgagctggatggctgg
atccatgagaagatgctgatggcgcgggacggcactcgggaagacggccacaagctgcat
aagagatggctccggcaccaggcattcatggccgagctggctcagaataaggagtggctg
gagaagattgagagggagggccagcaactgatgcaagagaaaccggagctggcagcctcg
gtgcgaaaaaagctgggagagatccggcagtgctgggcagagctggagagcaccacccag
gccaaggccaggcagctctttgaagccagcaaggccgaccagctggttcagagcttcgcc
gaactggataagaagctccttcacatggaaagccagctacaagacgtggaccccggaggg
gacctggccaccgtcaatagccaactcaagaagctgcagtcgatggagtcgcaggtggag
gagtggtaccgcgaggtgggagagttgcaggcgcagaccgcggcgctgcctctggagccg
gcgagcaaggagctggtgggcgagcggcagaacgcggtgggcgagcgcctggtgcgtctg
ctcgagccgctgcaggagcgccgccgcctgctgctcgcctccaaggagctgcaccaggtg
gcgcacgacctcgacgatgagctggcgtgggtccaggagcggctgccactggccctgcag
acagagcgaggcaatggtttgcaggccgtccagcagtacatcaaaaagaatcagggcctg
cggcgggagatccaggcgcacgggccgcgcctggaggaggtgctggagcgggcgggcgcc
ctggcgtcgctgcgcagccccgaggcggaggccgtgcgccgcggccaggagcagctgcag
ggcgcctgggccgggctgcgggaggcggccgagcggcggcagcaggtgctggacgccgcc
ttccaggtggagcagtactacttcgacgtggccgaggtggaggcgtggctgggcgagcag
gagctgctcatgatgagtgaggacaagggcaaggacgaacagagtaccctgcagctgctc
aagaagcacctgcagctggagcagggcgtggagaactacgaggaaagcatcgcacagctg
tcgcgccagtgccgggcgctgctggagatggggcacccggacagcgagcagatcagccgg
cggcagtcgcaggtggaccgcctgtacgtggcgctcaaggagctgggcgaggaacgccgc
gtgggcctggagcagcagtactggctgtaccagctcagccgccaggtggacgagctggag
cactggatcgcagagaaggaggtggtggctggctcccccgaactcggccaggactttgag
cacgtcacggtgctgcaagagaaattctcggagttcgccagtgagaccggcacggcaggg
cgggagcggctggcagccgtgaaccagatggtggacgagctgatcgagtgtggccatacg
gcggcggccaccatggccgagtggaaggacgggctgaatgaggcctgggccgagctgctg
gagcttatgggcacgcgggcccagctgctggccgcctctcgggagctgcataagttcttc
agtgatgcccgagagcttcaaggacagatcgaggagaagcggaggcgactgccccgccta
acagccccacctgagccgagacccagtgccagctccatgcagcggaccctgcgcgccttt
gaacatgacctgcagctcctcgtgtcccaggttcggcagctccaggagggggccgcccaa
ctgcggacggtgtacgccggtgagcacgcggaggccatcgccagccgggagcaggaggtg
cttcagggctggaaggagctgctggcagcctgcgaggacgcccgcctgcacgtgagctcc
acggccgacgccctgcgattccacagccaggcccgcgacctgctctcctggatggatggc
atcgctggccagattggggcagctgacaagcccagggacgtgtcgtcggtggaggtgctc
atgaactaccaccagggcctgaagactgagctggaggcacgggtgcctgagctgacagcc
tgccaggagctggggcgctctctgctgctcaacaagagtgccatggctgatgagatccag
gcacagctggacaagctgggaaccaggaaggaggaggtgtcggacaagtgggaccgccat
tgggagtggctgcagcagatgctggaggtgcaccagtttgcccaggaggcggtggtggcc
gatgcctggctgacagcccaggagccgctcctgcagagccgggagctgggcagcagcgtg
gacgaggtggagcagcttatccggcgacacgaggccttccgtaaagcggctgctgcctgg
gaagagaggttcagctctctgcggcgcctgaccacgatcgagaaactcaaggcggaacag
agcaagcagccgcccacacccctgctggggcgcaagttctttggagaccctgcggaactg
gcggccaaggctgcgcccctgctgcggccagggggctacgagaggggcttggagccccta
gcccgccgggcctcagacacgctgtcggccgaggtgcggacccgggtggggtacgtgcgc
caggagctcaagcccgagcgcctccagccgcgcatcgaccggctgccggacgtcccaggg
agagtggagcccgccgccctgccagccgcaccggaggacgcggcggagacccctggggcc
cccgcagccgcggagcaggtccggccgcggccagagcgccaggagtcagccgatcgcgcg
gaggagttgcccaggaggcggcggcctgagcggcaggaatcggctgatcaatctgaggag
gctgcgcggaggcggcggccagagcggcaggagtccgcggatcacgaggtagcacatagc
cttactctgggccgctacgagcagatggagcggcggcgcgagcggcgggagcggcggttg
gagcggcaggagtccagcgagcaagagatgcctatcagaggagacctggccaaggggaag
gccaccctggctgacattgtggagcagctgcaggagaaagaggcaggacccgggctccct
gttgggccgtcgctgcctcagcctcgggagcttccccccggccgcctgcccaacgggctt
gagccgcccgagcggacacctcggccagaccggccgcgggctcgggaccggcccaagccg
cgacggcggccgcggcccagagagggtggtgagggcgggggaagccggcgctcgcgctcc
gccccggcccaaggcggctccgcccccgcgcctcctcctccgcccactcacacagtgcag
cacgagggcttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccgg
tcatgggtgagcctgtactgcgtgctcagcaagggggagctgggcttctacaaggatgcc
aagggcccagcatctgggggcacacacggcggggagccactgctcagcctgcacaaggcc
accagcgaggtggctagtgactacaagaaaaagaagcacgtcttcaagctccagacccag
gatggcagtgagttcttgcttcaggctaaagatgaggaagaaatgaacggctggctggag
gctgtggctgcctcggtggcggaacacgccgagatcgcccgctggagccagacagcgccc
accacgtcgtccacagacgagggcaaccccaagcgggaggcaggggagcgcagagccagt
gggcgccggaagtga
DBGET
integrated database retrieval system
