Sus scrofa (pig): 100626560
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Entry
100626560 CDS
T01009
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X9
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100626560 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100626560 (STAU1)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100626560 (STAU1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100626560 (STAU1)
mRNA cycle factors
Stress granule specific factors
100626560 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
100626560
NCBI-ProteinID:
XP_013838788
Ensembl:
ENSSSCG00000027444
UniProt:
A0A8D0LS81
LinkDB
All DBs
Position
17:complement(50804959..50903155)
Genome browser
AA seq
496 aa
AA seq
DB search
MKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGK
GKTRQAAKHDAAAKALRILQNEPPPERLEVNGRESEEENLNKSEISQVFEIALKRNLPVN
FEVARESGPPHMKSFVTRVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVERV
KPRIKKKTKSIVRLQSTQEYGQGMNPISRLAQIQQAKKEKEPEYLLLTERGLPRRREFVM
QVKVGNHTAEGSGTNKKVAKRNAAENMLEILGFKVPQAQPTKPALKSEEKTPIKKPGDGR
KVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDFTR
VAPNPAKATVTAMIARELLYGGTSPTAETILKNNISSGHVPHGPLTRPSEQLDYLSRVQG
FQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQNT
EMPRTGNGPMSVCGRC
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttggaaaaaaaccaatgtataagcctgtcgatccttactctcggatgcagtcc
acctataactacaacatgagaggaggtgcttatcccccaaggtacttttacccatttcca
gtaccacctttactttatcaagttgagctttctgtgggaggacagcaatttaatgggaaa
ggaaagacgagacaggctgcgaaacacgatgctgctgcgaaagctttgaggatcctgcag
aatgagcccccacctgagaggctggaggtgaatggaagagaatcagaagaagaaaatctc
aataaatctgaaataagtcaagtgtttgagattgcgcttaaacggaacttgcctgtgaat
tttgaggtcgcccgggagagtggcccaccccacatgaagagctttgtgaccagggtgtca
gttggggagtttgtaggggaaggtgaagggaagagcaagaagatttcaaagaaaaacgct
gctatagctgttcttgaggagctgaagaagttaccacctctgcctacagtggagcgagtg
aagcccagaatcaaaaagaaaacaaagtctatagtcaggttacagagcacccaggagtat
ggccaggggatgaaccccattagcagactggcccagatccagcaggcgaaaaaggagaag
gagccggagtacctgctcctcaccgagcgaggcctcccgcgccgccgggagtttgtgatg
caggtgaaggtgggaaaccacactgcagaaggatccggcaccaataagaaggtggcgaaa
cgcaatgcagccgagaacatgctggagatccttggtttcaaagtcccacaggctcagccc
accaaaccagccctcaaatccgaggagaagacacccataaagaaaccaggggatggaaga
aaagtaaccttttttgaacctggctctggggatgaaaacgggactagcaataaagaggac
gagtttaggatgccttatcttagtcatcagcagctgcctgctggaattcttcccatggtg
cctgaggttgcccaggccgtaggggtcagtcaaggacatcacaccaaagacttcacaagg
gtggctccaaatcctgccaaggccacggtaactgccatgatagcccgtgaattgttgtat
gggggcacctcgcctacagccgagaccattttaaagaataacatctcttcaggccacgta
ccccatggacccctcacgagaccgtccgagcagctggactatctctccagagtccaggga
ttccaggttgaatacaaagacttccccaaaaacaacaagaacgaatttgtatctcttatc
aactgctcctctcagccgcccctgatcagccatggtattggaaaggatgtggagtcctgc
cacgacatggctgcactgaacattttaaagttgctgtctgagttggaccaacaaaataca
gagatgccaagaacaggaaatggaccaatgtctgtgtgtgggaggtgctga
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