Sus scrofa (pig): 100626621
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Entry
100626621 CDS
T01009
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41 isoform X1
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100626621 (TRIM41)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100626621 (TRIM41)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100626621 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
Apolipoprotein
zf-RING_5
zf-RING_6
DUF3631
Phage_lysis
DUF1664
Motif
Other DBs
NCBI-GeneID:
100626621
NCBI-ProteinID:
XP_020939058
UniProt:
A0A287AJ30
A0A8D1SPK9
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All DBs
Position
2:complement(57285401..57295771)
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AA seq
629 aa
AA seq
DB search
MAAVAMAPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD
REEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMGGSNWDNM
DYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCF
TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPNPGRGSRGNEQGICPKHQEALKLFCEVD
EEAICVVCRESRNHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE
LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS
RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKM
SRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHSKRFSADCCVLGAQGF
RSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVGSGDASSSRHHHRRRRLHLPQ
QPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFYNAETLAHV
HTFSAAFLGERVFPFFRVLSKGTRIKLCP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgttgccatggcacccaaccctgtgcagacccttcaggaggaggcggtgtgc
gccatctgcctggattacttcacggaccccgtgtccatcggctgcgggcacaacttctgc
cgagtgtgtgtaacccagttgtggggaggggaggatgaagaggacagggacgagttagac
cgggaagaagaggaggaggacggcgaggaggaggaagtggaggctgtgggggccggtggt
gggtgggacacccccatgcgggatgaagactatgagggcgacatggaagaggaggttgag
gaggaagaggagggtgtgttctggaccagtggcatgggcgggtcgaactgggacaacatg
gactacgtgtgggaggaggaggacgaggaggaagacctggactattacttgggggacatg
gaggaggacctgaggggggaggatgaggaggacgaggaggaagtgctggaggaggacgaa
gaagaggaactagatcccgtcaccccactgcccccgcctccagcccctcggaggtgcttc
acctgcccccagtgccgcaagagctttcctaggcggagcttccgccccaacctgcagctg
gccaacatggtccaggtgattcggcagatgcacccaaaccctggtcgagggagccgtggg
aacgagcagggcatttgtcccaaacaccaagaagccctgaagctcttctgcgaggtggat
gaagaggccatctgtgtggtgtgccgagaatccaggaaccacaaacagcacagcgtggtg
ccattggaggaggtggtacaggagtacaaggccaagctgcaggggcatgtggaaccactg
aggaagcacctggaggctgtgcagaagatgaaggcgaaggaggagagacgggtgacagag
ctgaagagccagatgaagtcagagctggcagctgtggcctcagaattcgggcggctgaca
cggtttctggcggaagagcaggcagggctagagcggcgcctccgagagatgcatgaagct
cagctggggcgtgcgggagcagcggccagccgcctagcggagcaggccgcccagctgagc
cgcctgctggctgaagcccaggagcggagccagcaggggggcctacggctgctccaggac
atcaaggagactttcaataggtgtgaagaggtacagctgcagcccccagaggtctggtcc
cctgacccgtgtcaaccccatagccatgacttcctgacagacgccatcgtgaggaaaatg
agccggatgttctgtcaggctgcccgagtggacctgacgttggaccctgacacggctcac
ccggccctgatgctgtcccctgaccgccggggggtccgtctggcagagcggcggcaggag
gttgctgaccattccaagcgcttctcggccgactgctgcgtactgggggcccagggcttc
cgctctggccggcactactgggaggtagaggtgggtgggcggaggggctgggcggtgggc
gctgcccgtgaatcaacccatcataaagagaaggtgggctccggggggtcctctgtgggc
agtggggatgccagctcctcacgccatcatcatcgccgccggcggctccacctgccccag
caacccctgctccagcgggaagtgtggtgtgtgggcaccaatggcaaacgctaccaggca
cagagctcgacggagcagacactgctgagcccaagtgagaaacctcggcgctttggcgtg
tacctggactatgaggctgggcgcctgggcttctacaatgcggagactctggctcatgtg
cataccttttcggctgccttcctgggcgagcgtgtcttccctttcttccgggtgctctct
aagggcacccgcatcaagctctgcccttga
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