Sus scrofa (pig): 100626674
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Entry
100626674 CDS
T01009
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100626674 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100626674 (DHX36)
03012 Translation factors [BR:
ssc03012
]
100626674 (DHX36)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100626674 (DHX36)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100626674 (DHX36)
Translation factors [BR:
ssc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100626674 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_19
AAA_22
nSTAND3
PhoH
AAA_14
ATPase
RsgA_GTPase
DUF6782
AAA_23
NPHP3_N
NACHT
Peptidase_S64
Motif
Other DBs
NCBI-GeneID:
100626674
NCBI-ProteinID:
XP_020925346
UniProt:
A0A8D1PEA6
M3VK01
LinkDB
All DBs
Position
13:complement(94298790..94350333)
Genome browser
AA seq
1012 aa
AA seq
DB search
MSYDYHQSWGRDGGPRGSSGGYGGSYGGGRGGGHGGNRGSGGGGGGGGGGGRGGRGRHPG
HLKGREIGLWYAKKQGQKNKEAERQERAVVHMDEHREEQIVQLLHSVQAKSDKDSEAQIS
WFAPEDHGYGTETSAENKQNSVKKIENQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEP
DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGK
TTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAETCGSGNSTGYQIRL
QSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHILLDEIHERNLQSDVLMTVIKDLLSY
RPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKELRS
QFKRGFMQGHVNRQEKEEKEAIYKERWPSYLRELRKKYSASTVDVMEMMDDDKVDLNLIA
ALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQV
FKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANA
KQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLS
RLMDPPSNEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLD
PVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRY
EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVRSRNPKDPESNINSDNEKIIKAVIC
AGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSS
IYLYDCTEVSPYCLLFFGGDISIQKDSDQETIAVDEWIIFQSPARIAHLVKELRKELDIL
LQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKATPRNLPSRFQDGYYS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagagctggggccgcgatggcgggccccgcggctccagcggg
ggttatggaggaagctatggaggaggccgtggaggaggccatggggggaaccgaggttcc
ggaggtggcggcggcggcggaggagggggtggtcgaggcggccgaggccgacatccaggg
cacctgaaaggccgcgaaatcggcttgtggtacgcgaagaaacaaggacagaaaaataag
gaagcggaaaggcaggagagagccgtagtgcatatggatgaacatcgagaagaacaaatt
gttcagctgttacattctgtgcaagctaagagtgataaagattcagaagcacaaatatcc
tggtttgctcctgaagatcacgggtacggtactgaaacttctgctgaaaacaaacaaaac
tcagtaaagaaaatcgagaatcaggaaaaaaaaatgataaatcaagaaaagaggccgttt
agaatcagggacaaatatattgaccgcgattctgaatatctcttgcaagaaaatgaaccg
gatgtaactttagaccaacaattactggaggatttacaaaagaaaaaaactgaccttcga
tatattgaaatgcagcatttcagggaaaagctgccttcctatggaatgcaaaaggaattg
gtaaatatgatcgataaccatcaggtcacagtaataagtggtgaaactggttgtggaaaa
accactcaagttactcagttcattttggataactacattgaaagaggaaaagggtctgca
tgccgaatagtttgtactcagccgagaagaattagtgccatttcagttgcagagagagtg
gctgcagaaagggcagaaacttgtggcagtggtaatagtactggataccaaattcgtctc
cagagtcggttgccaaggaaacagggttctatcctatattgtacaacaggaatcatcctt
cagtggcttcagtccgacccgcatttgtctagtgttagtcacattctgcttgatgaaatc
catgagagaaatctacagtcagatgtcttaatgactgttattaaagatcttctcagttat
cgacctgacttgaaagtagtattgatgagtgcaacattgaatgctgagaaattttcagaa
tattttggtaactgtccaatgatacatatacctggttttactttcccggttgtggagtat
cttttggaagatataattgaaaaaataagatatgttccagaacaaaaagaactcagatcc
cagtttaagaggggtttcatgcaagggcatgtaaatagacaggaaaaagaagaaaaagaa
gcaatctataaggaacgctggccaagttatttaagagaactcagaaaaaagtattctgca
agtactgtagatgttatggaaatgatggatgatgataaagttgacctgaatttgattgct
gcccttattcgatacattgttttggaagaagaggatggtgcaatattggtctttctgcca
ggctgggacaatatcagcactttacatgatctcttgatgtcacaagtgatgtttaaatca
gacagatttattattatacctttacattcactgatgcctacagttaaccagacacaggta
tttaaaagaacccctcctggtgttcggaaaatagtaattgccaccaacattgcagagact
agcattaccatagatgatgtagtttatgtgatagatggaggaaaaataaaggagacacac
tttgatacacagaacaacatcagtacaatgtctgctgagtgggttagtaaagctaatgcc
aaacaaaggaaaggtcgagctggaagagttcaacctggtcattgctatcatctgtataat
ggtcttagagcaagccttctagatgactatcaactaccagaaattttgagaacacctttg
gaagaactttgtttacaaataaagattttaagactagggggaattgcttactttctaagt
aggctaatggatccaccatcgaatgaagcagtgtcactctccataaaacatctgatggaa
ctgaatgctttggataaacaagaagaattgacacctcttggagtccacttagcacgatta
ccagttgagccacacattggaaaaatgattctttttggagctctattctgttgcttagat
ccagtactcaccattgctgctagtctcagcttcaaagacccctttgtgattccattgggg
aaagaaaaggttgcagatgcaagaagaaaggaattggcaaaggatactaaaagtgaccac
ctcacagttgtgaatgcatttgagggctgggaagaagctagacgacgtggtttcagatat
gaaaaagactattgctgggaatattttctgtcttcaaacacgctgcagatgctgcataac
atgaaagggcagtttgctgagcatcttcttggagctggatttgtacgcagtagaaatcct
aaagatccagaatctaatataaattcagataatgagaagataattaaggctgtcatctgt
gctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaagaaaaatg
gtgaaagtttacacaaaaactgatggactagttgctattcatcctaaatctgttaacgtg
gagcaaacagagtttcactacaactggcttatctatcacctgaagatgagaacaagtagt
atatacttgtatgactgcacagaagtttccccatactgtctcttgttttttggaggtgat
atttccatccagaaggatagtgatcaggaaactattgctgtagatgaatggattatcttt
cagtctccggcaagaattgcccatctcgttaaggaattaagaaaggaactagatatcctt
ctgcaagagaagattgaaagcccccatcctgtagactggaaggacactaaatccagagac
tgtgcagtactctcagctattatagacttgatcaaaacacaggagaaagcaactcccagg
aatttgccgtcacgattccaggatggatattatagctga
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