Sus scrofa (pig): 100626911
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Entry
100626911 CDS
T01009
Symbol
SHMT2
Name
(RefSeq) LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00260
Glycine, serine and threonine metabolism
ssc00630
Glyoxylate and dicarboxylate metabolism
ssc00670
One carbon pool by folate
ssc01100
Metabolic pathways
ssc01200
Carbon metabolism
ssc01230
Biosynthesis of amino acids
ssc01240
Biosynthesis of cofactors
ssc01523
Antifolate resistance
ssc04981
Folate transport and metabolism
Module
ssc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
100626911 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
100626911 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
100626911 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
100626911 (SHMT2)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
100626911 (SHMT2)
Enzymes [BR:
ssc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
100626911 (SHMT2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
100626911
NCBI-ProteinID:
XP_020947486
Ensembl:
ENSSSCG00000021493
ENSSSCG00000022116
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All DBs
Position
5:22535780..22540322
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AA seq
483 aa
AA seq
DB search
MAIRSQHSEAAQTQTGEATKGWSGQESLSDSDPEMWELLRREKDRQCRGLELIASENFCS
RAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY
SGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMTDVKRISATSIFFESMPYKLNPKT
GLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAA
KVIPSPFEHADVVTTTTHKTLRGARSGLIFYRKGVRTVDPKTGREIPYTFEDRINFAVFP
SLXGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHL
VLVDLRPKGLDGARVERVLELVSITANKNTCPGDRSAITPGGLRLGTPALTSRQFREDDF
RKVVAFIDEGVSIGLEVKSKTTKLQDFKSFLLKDPETCRRLADLRQRVEQFARAFPMPGF
EEH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccataaggagccagcacagcgaggcggcccagacccagactggagaagcaaccaag
ggctggtcaggccaggagagtctatcagacagtgaccctgagatgtgggagctgctgcgg
agagagaaggacaggcagtgtcgtggcctggagctcattgcctcagagaacttctgcagc
cgagctgcgctggaggccctggggtcctgtctgaacaacaagtactcggagggttatcct
ggcaagagatactatggaggagccgaggtagtggatgaaatcgagctgctgtgccagcgc
cgggccttggaggcctttgacctggatcctgctcagtggggagtcaatgtgcagccctac
tcggggtccccagccaatctggctgcctacacagcccttctgcagcctcacgaccgaatc
atggggctggacctgcccgatgggggccatctcacccatggctacatgaccgatgtcaag
cggatctcagccacatccatcttctttgagtctatgccctataagctgaatcccaaaact
ggcctcattgactatgaccagctggcactcactgctcggctcttccggccgcgactcatc
atagctggaacgagtgcctatgcacgcctcatcgactatgcccgcatgagagaggtgtgt
gatgaggtcaaggcacacctgctggcagacatggcccacattagtggcctcgtggctgcc
aaggtgatcccctcaccttttgagcatgcggatgttgtcaccaccaccactcacaagacc
cttcgaggggccaggtcaggactcatcttctaccggaagggtgtgcggactgtggacccc
aagactggccgggagatcccttacacgtttgaggaccgaatcaactttgctgtgttccca
tccctgncagggggcccccacaaccatgccatcgctgcagtggctgtggccttaaagcag
gcctgcacccccatgttccgggagtactccctgcaggttctgaagaacgctcgggccatg
gctgatgccctgctagagcgaggctactcgctggtgtctggcggcactgacaaccactta
gtgctggtagacctgcggcccaagggcctggatggagctcgagttgagcgggtgctagaa
cttgtgtccatcacggccaacaagaacacctgtcctggagatcgaagtgccatcactcct
gggggcctgcggctggggaccccagccttgacgtcacgccagttccgtgaggatgacttc
cgaaaagttgtggcctttatagacgaaggcgtcagcatcggcttggaggtgaagagcaag
accactaaactccaggatttcaaatccttcctgctcaaagacccagaaacgtgccgtcgg
ctggctgacctcaggcaacgggtggagcagtttgccagggccttccccatgcctggcttt
gaggaacactga
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