Sus scrofa (pig): 100626912
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Entry
100626912 CDS
T01009
Symbol
BHLHE41
Name
(RefSeq) class E basic helix-loop-helix protein 41 isoform X1
KO
K03730
class B basic helix-loop-helix protein 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100626912 (BHLHE41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100626912 (BHLHE41)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
100626912 (BHLHE41)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
UPF0261
Motif
Other DBs
NCBI-GeneID:
100626912
NCBI-ProteinID:
XP_003355589
Ensembl:
ENSSSCG00000028552
UniProt:
A0A8D0YEU7
A0A287AYR6
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All DBs
Position
5:47687662..47692761
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AA seq
482 aa
AA seq
DB search
MDEGIPHLQERQLLEHRDFIGLDYSSLYMCKPKRSMKRDDSKDTYKLPHRLIEKKRRDRI
NECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSL
KSPIQSDLDAFHSGFQTCAKEVLQYLARFESWTPREPRCVQLINHLHAVATQFLPTPQLL
TQQVPLSKGTGAPTTAPAGSVAAACLERAGQKLEPLAHCVPVIQRTQPSAELAAENDTDT
DSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMKLDSRGGGGGPGGGAAAA
AAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFAQPAAAAAPFCLPFYFLSPSAAA
AYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAFPCLSSVLSP
PPEKAAAAAAATLLPHEVASPGALHPPHPHGRTHLPFAGPREPGNPESSAQEDHSQPGKE
SP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggaattcctcatttgcaagaaagacagttactggaacatagagattttata
ggactggattattcctctttgtatatgtgtaagcccaaaaggagcatgaagcgagacgat
agcaaggatacctacaaattaccgcacagattaatagaaaagaaaagaagagaccgaatt
aatgaatgcattgctcagctgaaagacttactgcctgaacatctaaagttgacaactctg
gggcatctggagaaagcggtagtattggaattgactttgaaacacttaaaagctttaaca
gccttaacagagcagcagcatcagaagataattgctttacagaatggggagcgatctttg
aaatcgcccattcagtccgacttggatgcgttccactcgggatttcaaacatgcgccaaa
gaagtcttgcaatacctcgcccggtttgagagctggacgcccagggagcctcggtgtgtc
cagctgatcaaccacttgcacgccgtggccacccagttcttacccaccccgcagctgttg
actcaacaggttcctctgagcaaaggcaccggcgcgcccaccaccgcccccgccgggtcc
gtggccgccgcttgcctggagcgcgcggggcagaagctggagcccctcgcccactgcgtg
ccggtcatccagcggactcagcccagcgccgagctcgccgctgagaacgatacagacacg
gacagcggctacggcggcgaggccgaggcccggccagaccgcgagaaaggcaaaggcgcg
ggggcgagccgcgtcaccatcaagcaggagccccccggggaggactcgccggcgcccaag
aggatgaagctggattcccgcggcggcggcggcggtccggggggtggcgcggcggcggcg
gcagccgcgctcctggggccggacccggccgctgcagccgcactgctaagacccgacgcc
gccctgctcagctcgctggtggcgttcggcggaggcgggggcgcgcccttcgcgcagccg
gcggctgctgcagcccccttctgcctgcccttctacttcctctcgccttccgcggccgcc
gcctacgtgcagcccttcctggacaagagcggcctggagaagtacctgtacccggcggcg
gccgccgccccattcccactgctataccccggaatccccgccccggccgccgccgccgca
gctgcagccgccgcagccgccgcagccgccttcccctgcctgtcctcagtgttgtcgccc
cctccggaaaaggcagcggccgccgccgccgcgaccctcctgccgcacgaggtggcgtcc
cccggagcgctgcaccccccgcatccgcacggccgcacccacctgcccttcgccggcccc
cgtgagcccgggaacccagagagctccgctcaggaagatcactcgcagccaggaaaggaa
agcccctga
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integrated database retrieval system
