KEGG   Sus scrofa (pig): 100626921
Entry
100626921         CDS       T01009                                 
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
  KO
K06757  neurofascin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100626921 (NFASC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    100626921 (NFASC)
Cell adhesion molecules [BR:ssc04515]
 Immunoglobulin superfamily
  L1 family
   100626921 (NFASC)
SSDB
Motif
Pfam: Ig_3 I-set fn3 Ig_2 ig Bravo_FIGEY V-set Ig_DSCAM-DSCAML_C Ig_5 V-set_CD47 C2-set_2 Ig_VEGFR-1-like_5th BiPBP_C DUF4998
Other DBs
NCBI-GeneID: 100626921
NCBI-ProteinID: XP_020918889
Ensembl: ENSSSCG00000022951
LinkDB
Position
9:65502565..65715612
AA seq 1472 aa
MRRLAARGAAGDAGEVAPPAADSTDCAPGRSPSPCRLIDLCAIWDAGVFLPAAVAAAWKG
APSGVPRRRLNEAETLSSVQKAQLQRLEAARPRGPGSGDRGPVPRMARQQPPPWVHAAIL
FSLLSLSTAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHW
TRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQ
VSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNG
DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFNLKVLTNHPYNDSSLRNHPDMYSARG
VAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKLENFN
KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVC
RANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLL
ANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNY
HVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAQRGTT
VQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEEDSLTIFGVAERDQGSYTCVASTEL
DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI
TDYVVQFEEDQFQPGVWHDHSKFPGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSE
RYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNN
VTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLN
STAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFPGDRLRGVVSRL
FPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHP
NGILIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRADPVSRYRFSLSARTQVGSGEA
VTEESPAPPNEATPTAAPPTSPPTTVGATGIVSSTDVTATAATTEATTVPTIPTVAPTTI
ATTTVATTTTTTAATTTTTTTTTTESPPTTTRTKIQESAPDEQSIWNVTVLPNSKWANIT
WKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDNEGISST
VITFMTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVP
LGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSF
IGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq 4419 nt   +upstreamnt  +downstreamnt
atgcggcggctggcggcgagaggcgctgcaggggacgcgggggaagtggcgccgccggca
gcggacagcaccgactgcgctccgggccggagcccgagcccttgcaggttgattgactta
tgtgcaatctgggacgctggagttttccttcccgccgccgtcgctgcagcctggaaggga
gccccctctggtgttccgagaaggaggctgaatgaggcagagacgctgagctctgtccag
aaggcccagttacagcggctggaggcagcaagaccccgtgggccggggagtggggaccga
ggcccagtgccgaggatggccaggcagcagccaccgccctgggtccatgcagccatcctc
ttctccctgctcagcctcagcacggccatcgagatccctatggatccaagcattcagaat
gagctgtcccagcccccgaccatcaccaagcagtcggtgaaggaccacatcgtggatccc
cgtgataacatcttgattgagtgtgaagcaaaggggaaccctgcccccagcttccactgg
actcgcaacagcaggttcttcaacatcgccaaggacccccgggtgtcgatgaggaggagg
tctgggaccctggtgatcgacttccgcagcggcgggcggccagaggaatatgagggggag
taccagtgcttcgcccgcaacaaattcggcacagccctgtccaataggatccgcctgcag
gtgtccaaatctcccctgtggcccaaggaaaacctagaccctgttgtggttcaagaaggt
gctcctttgacgctccagtgcaaccctccacccggacttccatccccagtcatcttctgg
atgagcagctccatggagcccatcacccaagacaagcgtgtctcccagggccataatgga
gacctgtatttctccaatgtgatgctgcaggatatgcagacggactacagctgcaatgcc
cgcttccacttcacccataccatccagcagaagaaccccttcaacctcaaagttctcacc
aaccacccctataatgactcgtccttaagaaaccaccctgacatgtacagtgcccgcgga
gttgcggaaagaacacccagcttcatgtatccccagggcacagcgagcagtcagatggtg
ctgcgcggcatggacctcctgctggagtgcatcgcttctggggtcccaacaccagacatc
gcatggtacaagaaaggtggggacctcccatctgacaaggccaagcttgagaactttaac
aaggccctgcgtatcaccaatgtgtctgaggaagactctggggagtatttctgcctggcc
tccaacaagatgggcagcatccggcacacgatctcggtgagagtaaaggctgctccctac
tggctggacgaacccaagaaccttatcctggctcctggcgaagacgggagattggtgtgt
cgagccaatgggaaccccaaacccactgtccagtggatggtgaatggggaacctttgcaa
tcggcaccacccaatccaaaccgagaggtggctggggacaccatcatcttccgggacacc
cagatcagcagcagggccgtgtaccagtgcaacacctccaatgagcacggctacctgctg
gccaatgccttcgtcagcgtgctggatgtgccgcctcggatgctgtcaccccggaaccag
ctcatcagggtgatcctatacaaccggacacgcctggactgccccttctttgggtctccc
atccccacgctccgatggtttaagaatgggcaaggaagcaacctggatggtggcaactac
catgtctatgagaacggcagtctggaaatcaaaatgatccgcaaagaggaccaaggcatc
tacacctgtgtcgccaccaacatcctgggcaaagctgagaaccaggtccgcctggaggtc
aaagacccgaccaggatctaccggatgcctgaggaccaggtcgcccagaggggcaccacg
gtgcagctggagtgtcgcgtgaagcacgacccctccctgaagctcacggtgtcctggctg
aaggacgacgagcccctctacattgggaacaggatgaagaaggaagaggattccctgacc
atctttggtgtggcagagcgggaccaaggcagttacacgtgtgtcgccagcaccgagctg
gaccaagacctggccaaggcctacctgaccgtgctagctgatcaggccactccaactaac
cgtttggctgccctgcccaaaggacggccagaccgaccccgggacctggagctcaccgac
ctggccgagaggagcgtgagactgacctggatcccgggggacgataacaacagccccatc
acagactatgtcgtccagtttgaagaggaccagttccagccaggggtctggcacgaccat
tccaagttcccaggcagtgtcaactcagccgtcctccagctgtccccatacgtcaactac
cagttccgggtcattgccatcaacgaggtgggcagcagccatcccagcctcccgtctgag
cgctaccgaaccagcggagcaccccctgagtccaacccctcggatgtgaagggagagggg
accaggaagaacaacatggagatcacgtggacgcccatgaatgccacctctgcctttggc
cccaacctgcgctacatcgtcaagtggcgccggagggagacccgagagacctggaacaac
gtcacagtgtggggctcccgctacgtggtgggacagacccccgtctacgtgccctacgag
atccgggtccaggccgaaaatgactttgggaagggccctgagccggacaccgtcatcggg
tactcgggagaagattatcccagggctgcacccactgatgttaaaatccgagtcctgaac
agcacggccatcagccttcagtggaaccgggtctactcggacacggtccagggccagctc
agagagtaccgagcctactactggagggagagcagcttgctgaagaacctgtgggtgtct
cagaagaggcagcaagccggcttccccggcgaccgcctccgtggcgtggtgtcccgcctc
ttcccctacagcaactacaagctggagatggttgtggtcaatgggcgaggcgatgggcct
cgcagcgaaaccaaggagttcaccaccccggaaggagtacccagtgcccccaggcgtttc
agagtccggcagcccaacctggagacaatcaacctggaatgggatcatccagaacacccc
aatgggatcctgattggatatactctcaaatacgtggcctttaatggaaccaaagtagga
aagcagatagtggaaaacttctctcccaatcagaccaagttcacggtgcaaagagcagac
cctgtgtcgcgctaccgcttttctctcagtgccaggacgcaggtgggctctggggaagca
gtcacagaggagtcaccagcacccccaaatgaagctactccaaccgcagctcctcccacg
tcgcccccgaccacggtgggtgccacaggcattgtgagcagtactgacgttactgccacc
gctgccaccaccgaagccacaacagtccccaccatcccaactgtcgcacctaccaccatc
gccaccaccaccgtcgccacaactactacaaccactgccgccaccaccaccaccaccacc
accaccaccacggagagtcctcccaccaccaccaggactaagattcaagaatccgccccc
gacgagcagtccatatggaacgtcacagtgctccccaacagtaaatgggccaacatcacc
tggaagcacaatttcgggcccggaactgactttgtggttgagtacatcgacagcaaccat
acgaaaaaaactgtccctgttaaggcccaggcccagccgatacagctgacagacctctat
cccgggatgacatacacgttgcgagtttattcccgggacaacgagggcatcagcagtacc
gtcatcacctttatgaccagtacagcttacaccaacaaccaggcagacatcgccacccag
ggctggttcattgggctcatgtgtgccatcgccctcctggtgctgatcctgctcatcgtc
tgtttcatcaagaggagtcgaggcggcaagtacccagtacgagaaaagaaggatgttccc
ctgggccctgaagaccccaaagaagaggacggttccttcgattacagtgatgaagacaac
aagcccctgcagggcagccagacatccctggacggcaccatcaagcagcaggagagcgac
gacagcctggtggactatggcgagggcggcgagggccagttcaacgaggatggctccttc
atcggccagtacacagtcaaaaaggacaaggaggagacagagggcaacgagagctcagag
gccacgtcgcctgtcaatgccatctactctctggcctaa

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