Sus scrofa (pig): 100626921
Help
Entry
100626921 CDS
T01009
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100626921 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100626921 (NFASC)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
L1 family
100626921 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
100626921
NCBI-ProteinID:
XP_020918889
Ensembl:
ENSSSCG00000022951
LinkDB
All DBs
Position
9:65502565..65715612
Genome browser
AA seq
1472 aa
AA seq
DB search
MRRLAARGAAGDAGEVAPPAADSTDCAPGRSPSPCRLIDLCAIWDAGVFLPAAVAAAWKG
APSGVPRRRLNEAETLSSVQKAQLQRLEAARPRGPGSGDRGPVPRMARQQPPPWVHAAIL
FSLLSLSTAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHW
TRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQ
VSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNG
DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFNLKVLTNHPYNDSSLRNHPDMYSARG
VAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKLENFN
KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVC
RANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLL
ANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNY
HVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAQRGTT
VQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEEDSLTIFGVAERDQGSYTCVASTEL
DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI
TDYVVQFEEDQFQPGVWHDHSKFPGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSE
RYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNN
VTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLN
STAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFPGDRLRGVVSRL
FPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHP
NGILIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRADPVSRYRFSLSARTQVGSGEA
VTEESPAPPNEATPTAAPPTSPPTTVGATGIVSSTDVTATAATTEATTVPTIPTVAPTTI
ATTTVATTTTTTAATTTTTTTTTTESPPTTTRTKIQESAPDEQSIWNVTVLPNSKWANIT
WKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDNEGISST
VITFMTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVP
LGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSF
IGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctggcggcgagaggcgctgcaggggacgcgggggaagtggcgccgccggca
gcggacagcaccgactgcgctccgggccggagcccgagcccttgcaggttgattgactta
tgtgcaatctgggacgctggagttttccttcccgccgccgtcgctgcagcctggaaggga
gccccctctggtgttccgagaaggaggctgaatgaggcagagacgctgagctctgtccag
aaggcccagttacagcggctggaggcagcaagaccccgtgggccggggagtggggaccga
ggcccagtgccgaggatggccaggcagcagccaccgccctgggtccatgcagccatcctc
ttctccctgctcagcctcagcacggccatcgagatccctatggatccaagcattcagaat
gagctgtcccagcccccgaccatcaccaagcagtcggtgaaggaccacatcgtggatccc
cgtgataacatcttgattgagtgtgaagcaaaggggaaccctgcccccagcttccactgg
actcgcaacagcaggttcttcaacatcgccaaggacccccgggtgtcgatgaggaggagg
tctgggaccctggtgatcgacttccgcagcggcgggcggccagaggaatatgagggggag
taccagtgcttcgcccgcaacaaattcggcacagccctgtccaataggatccgcctgcag
gtgtccaaatctcccctgtggcccaaggaaaacctagaccctgttgtggttcaagaaggt
gctcctttgacgctccagtgcaaccctccacccggacttccatccccagtcatcttctgg
atgagcagctccatggagcccatcacccaagacaagcgtgtctcccagggccataatgga
gacctgtatttctccaatgtgatgctgcaggatatgcagacggactacagctgcaatgcc
cgcttccacttcacccataccatccagcagaagaaccccttcaacctcaaagttctcacc
aaccacccctataatgactcgtccttaagaaaccaccctgacatgtacagtgcccgcgga
gttgcggaaagaacacccagcttcatgtatccccagggcacagcgagcagtcagatggtg
ctgcgcggcatggacctcctgctggagtgcatcgcttctggggtcccaacaccagacatc
gcatggtacaagaaaggtggggacctcccatctgacaaggccaagcttgagaactttaac
aaggccctgcgtatcaccaatgtgtctgaggaagactctggggagtatttctgcctggcc
tccaacaagatgggcagcatccggcacacgatctcggtgagagtaaaggctgctccctac
tggctggacgaacccaagaaccttatcctggctcctggcgaagacgggagattggtgtgt
cgagccaatgggaaccccaaacccactgtccagtggatggtgaatggggaacctttgcaa
tcggcaccacccaatccaaaccgagaggtggctggggacaccatcatcttccgggacacc
cagatcagcagcagggccgtgtaccagtgcaacacctccaatgagcacggctacctgctg
gccaatgccttcgtcagcgtgctggatgtgccgcctcggatgctgtcaccccggaaccag
ctcatcagggtgatcctatacaaccggacacgcctggactgccccttctttgggtctccc
atccccacgctccgatggtttaagaatgggcaaggaagcaacctggatggtggcaactac
catgtctatgagaacggcagtctggaaatcaaaatgatccgcaaagaggaccaaggcatc
tacacctgtgtcgccaccaacatcctgggcaaagctgagaaccaggtccgcctggaggtc
aaagacccgaccaggatctaccggatgcctgaggaccaggtcgcccagaggggcaccacg
gtgcagctggagtgtcgcgtgaagcacgacccctccctgaagctcacggtgtcctggctg
aaggacgacgagcccctctacattgggaacaggatgaagaaggaagaggattccctgacc
atctttggtgtggcagagcgggaccaaggcagttacacgtgtgtcgccagcaccgagctg
gaccaagacctggccaaggcctacctgaccgtgctagctgatcaggccactccaactaac
cgtttggctgccctgcccaaaggacggccagaccgaccccgggacctggagctcaccgac
ctggccgagaggagcgtgagactgacctggatcccgggggacgataacaacagccccatc
acagactatgtcgtccagtttgaagaggaccagttccagccaggggtctggcacgaccat
tccaagttcccaggcagtgtcaactcagccgtcctccagctgtccccatacgtcaactac
cagttccgggtcattgccatcaacgaggtgggcagcagccatcccagcctcccgtctgag
cgctaccgaaccagcggagcaccccctgagtccaacccctcggatgtgaagggagagggg
accaggaagaacaacatggagatcacgtggacgcccatgaatgccacctctgcctttggc
cccaacctgcgctacatcgtcaagtggcgccggagggagacccgagagacctggaacaac
gtcacagtgtggggctcccgctacgtggtgggacagacccccgtctacgtgccctacgag
atccgggtccaggccgaaaatgactttgggaagggccctgagccggacaccgtcatcggg
tactcgggagaagattatcccagggctgcacccactgatgttaaaatccgagtcctgaac
agcacggccatcagccttcagtggaaccgggtctactcggacacggtccagggccagctc
agagagtaccgagcctactactggagggagagcagcttgctgaagaacctgtgggtgtct
cagaagaggcagcaagccggcttccccggcgaccgcctccgtggcgtggtgtcccgcctc
ttcccctacagcaactacaagctggagatggttgtggtcaatgggcgaggcgatgggcct
cgcagcgaaaccaaggagttcaccaccccggaaggagtacccagtgcccccaggcgtttc
agagtccggcagcccaacctggagacaatcaacctggaatgggatcatccagaacacccc
aatgggatcctgattggatatactctcaaatacgtggcctttaatggaaccaaagtagga
aagcagatagtggaaaacttctctcccaatcagaccaagttcacggtgcaaagagcagac
cctgtgtcgcgctaccgcttttctctcagtgccaggacgcaggtgggctctggggaagca
gtcacagaggagtcaccagcacccccaaatgaagctactccaaccgcagctcctcccacg
tcgcccccgaccacggtgggtgccacaggcattgtgagcagtactgacgttactgccacc
gctgccaccaccgaagccacaacagtccccaccatcccaactgtcgcacctaccaccatc
gccaccaccaccgtcgccacaactactacaaccactgccgccaccaccaccaccaccacc
accaccaccacggagagtcctcccaccaccaccaggactaagattcaagaatccgccccc
gacgagcagtccatatggaacgtcacagtgctccccaacagtaaatgggccaacatcacc
tggaagcacaatttcgggcccggaactgactttgtggttgagtacatcgacagcaaccat
acgaaaaaaactgtccctgttaaggcccaggcccagccgatacagctgacagacctctat
cccgggatgacatacacgttgcgagtttattcccgggacaacgagggcatcagcagtacc
gtcatcacctttatgaccagtacagcttacaccaacaaccaggcagacatcgccacccag
ggctggttcattgggctcatgtgtgccatcgccctcctggtgctgatcctgctcatcgtc
tgtttcatcaagaggagtcgaggcggcaagtacccagtacgagaaaagaaggatgttccc
ctgggccctgaagaccccaaagaagaggacggttccttcgattacagtgatgaagacaac
aagcccctgcagggcagccagacatccctggacggcaccatcaagcagcaggagagcgac
gacagcctggtggactatggcgagggcggcgagggccagttcaacgaggatggctccttc
atcggccagtacacagtcaaaaaggacaaggaggagacagagggcaacgagagctcagag
gccacgtcgcctgtcaatgccatctactctctggcctaa
DBGET
integrated database retrieval system