KEGG   Sus scrofa (pig): 100627260
Entry
100627260         CDS       T01009                                 
Symbol
TULP4
Name
(RefSeq) LOW QUALITY PROTEIN: tubby-related protein 4
  KO
K24720  tubby-related protein 4
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ssc04990]
    100627260 (TULP4)
Domain-containing proteins not elsewhere classified [BR:ssc04990]
 Other domain-containing proteins
  Tubby family proteins
   100627260 (TULP4)
SSDB
Motif
Pfam: Beta-prop_WDR35_TULP_N Tub WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_RIG_2nd WD40_WDHD1_1st SOCS_box Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Prp19 WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st WDR55 Beta-prop_ELP1_1st EIF3I DUF3527 Beta-prop_EML Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 100627260
NCBI-ProteinID: XP_020942044
Ensembl: ENSSSCG00000004059 ENSSSCG00000022710
LinkDB
Position
1:complement(8650811..8891596)
AA seq 1532 aa
MYAAVEHGPILCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILSMSWNYPAFLVEDSSESDTDSDDYSPP
QDGPAAYPIPVQTIKPLLTVSFTSGDISLMSNYDDLSPTVIQSGLKEVVAQWCTQGDLLA
VAGMERQTQLSDLPNGPLLRSALVKFYNVRGEHIFTLDTLVQRPIVSICWGHRDSRLLMA
SGPALYVVRVEHRVSSLQLLCQQAIASALREDKDVSKLTLPPRLCAYLSTAFIPTIKPPI
PDPNNMRDFVSYPSAGSERLHCTMKRTEDDPEVGGPCYTLYLEHLGGLVPILKGRRISKL
RPEFVIMDPRTDGRADEIYGNSLISTMIDSCNCSDSSDIELSDDWAAKKSPKISRASKSP
KLPRINIEARKSPKLSRAAQELSRSPRLPMRKASIGSPSLTRREFPFEDITQHNYLAQVT
SNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDSVNLPVFNP
NVFSEDEDDLPVTGASGVPENNPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ
LDVLTNQTTAVGAAEHAGDSAPQYPVANRYSSPGQVIFGGVEMGRILPNPPQLSLPPPAQ
GAITLTAVDHGDRDHEHLQKPAKALRPVPQLAXEGDAVVFSAPQEVQVAKVNPPPPYPGT
IPAAPTTAAPPPPLLPPQPPVDTCLKKSDFSLYPTAAHYQPPLGYERITTFDSSGNVEEV
CRPRTRMLCSQNTYTLPGPGSSATLRLTATEKKVPQPCTSATLNRLTVPRYSIPPGDPPP
YPDLAAXLGPSRGAGQRPDAGLIHATLRRNNREAALKAAQLAEPPRPPPHPPKPKAAQFP
ARPPPALYTCSQCSGAGAGAAGRPEPGAGPGASPLTSQSSYSLLSAADSARERADYVNSA
FTEDEALAQHCQADKALRHPALSEATVAVKRPPPYQWDPVLGEDVWVPQERTAQTAVPNP
LKLPPLIVGQSQHLDVSRVPFVSPKSPASPTATFQTGYGMGAPYPGGYTTSPLPGVQAPC
SPKEALAPPPFAQQESSVVLQPAYPASLSYCPLPPMYPGSSTCSSLQLPPIALHPWNSYS
ACPPVQNPQGTLPPKAHLVVEKPLVSPPPTDLQSHLGTEVMVETADNFQEVLSLTESPVP
QRTEKFGKKNRKRLDSRAEEAITEGKVKKEARTLSDFNSLISSPRLGREKKKVKSRKDQL
KSKKLNKTNEFQDSSESEPELFISGDELMNQSQGSKKGWKSKRSLRAASELEEFKCRKAS
EKEDGRLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGR
IDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq 4599 nt   +upstreamnt  +downstreamnt
atgtatgcggcagtggagcatgggcccatcctctgcagcgactccaacatcctctgcctg
tcctggaagggccgtgtccccaagagcgagaaggagaagcccgtgtgccggaggcgctac
tacgaggagggctggctggccacgggcaacgggcggggtgtcgtcggggtgaccttcacc
tccagccactgccgccgggacaggaacactccgcagagaatcaacttcaacctgcggggc
cacaacagtgaggtggtgctggtgaggtggaacgagccctaccagaagctggccacgtgc
gacgcggatggtgggatattcgtgtggatccagtacgaagggcggtggtccgtggagttg
gtcaatgaccgcggggcccaggtgagtgacttcacgtggagccacgatgggactcaagca
cttatttcctatcgagatgggtttgtcctggttggttctgtcagtggacaaagacactgg
tcatctgagatcaacttggaaagtcagatcacgtgtggcatatggactcctgatgaccaa
caggtcctctttggcacggcggacgggcaggtgatcgtcatggactgccacggcaggatg
ctggcccacgtcctcctgcacgagtcggacggcatcctcagcatgtcctggaactacccc
gccttcctggtggaggacagcagcgagagcgacaccgactccgacgactactccccgccc
caagatggtccggccgcctatcccatcccggtgcagaccatcaagccgctgctcaccgtc
agcttcacctcgggagacatcagcctgatgagcaactacgacgacctgtctcccactgtc
atccagtcagggctgaaagaggtggtggcccagtggtgcacccagggagacctcctggcg
gtcgctggtatggaacggcagacccagctcagtgaccttcccaacggccctcttctgagg
agtgccctggtcaagttctacaatgttcgtggggagcacatctttacactggacacgctt
gtgcagcgccccatcgtctccatctgctggggacaccgggactctcggctgctgatggcg
tcaggaccggccctgtatgtggtacgcgtggagcaccgggtgtccagcctgcagctgctc
tgccagcaggccattgccagcgccctgcgagaggacaaggacgtcagcaagctgaccctg
cccccccgcctttgcgcctacctctccactgccttcatccccaccatcaagcccccgatt
ccagaccccaacaacatgcgagactttgtcagctacccgtcagccggcagcgagcgcctg
cactgcaccatgaagcgcacggaggacgacccggaggtgggcggcccctgctacaccctc
tacctggagcacctgggcgggctcgtgcccatcctcaaggggcggcgcatcagcaagctg
cggcccgagttcgtcatcatggacccgcggaccgatggcagagcagatgaaatctatggg
aacagcttgatttctaccatgattgacagctgcaactgctcagactccagtgacatcgaa
ctgagtgacgactgggccgccaagaagtctcccaaaatctcccgggctagcaaatcaccc
aaactcccaaggatcaacatcgaggcccgcaagtcccccaagctgtcgcgggccgctcag
gagctgtcacgctccccgcgcctgccgatgcgcaaggcatccatcggctcgcccagcctg
acgcggagggagtttccttttgaagacatcactcagcacaactatcttgctcaggtcacg
tctaatatctggggaaccaaatttaagattgtgggcttggctgctttcctgccaaccaac
ctcggtgcagtaatctataaaaccagcctcctgcatctccagccgaggcagatgaccatc
tatctcccggaggttcggaagatttccatggactctgtgaacttacctgtcttcaacccg
aacgtcttcagtgaagatgaagatgacctaccagtgacaggagcatctggtgtgcctgag
aacaacccaccttgcaccgtcaacatccctatcgcacccatccacagctcggctcaagct
atgtcccccacgcagagcatcgggctggtgcagtccctgctggccaaccagaatgtgcag
ctggacgtcctgaccaatcagaccacagccgtgggggcggcggagcacgcaggcgacagt
gctccccagtacccagtggccaaccgctattccagccctggccaggtgatcttcggaggt
gtggagatgggccgcatcctccccaacccccctcagctgtccctgccgccgccagcccag
ggggccatcacgctgaccgcggtggaccatggagaccgtgaccacgagcacttgcagaag
ccagccaaggccctgcggccagtgccgcagttggccnacgagggggatgcggtggtgttc
agtgccccccaggaggtccaggtggcgaaggtgaaccccccacccccctaccccggaacc
atccccgcagcccccaccacggccgcgccgccgcccccgctgctgcccccgcagcccccg
gtggacacgtgcttgaagaagagtgacttctccctgtaccccacggcggcgcactaccag
ccacccctgggctacgagcggatcaccaccttcgacagcagcggcaacgtggaggaggtg
tgccggccccggacgcggatgctctgctcccagaacacctacacgctccccgggcccggc
agctcggccaccctgcggctcacggccaccgagaagaaggtcccccagccctgcaccagc
gccaccctgaaccgcctgacggtcccgcgttactccatccccccgggggacccgcccccc
tatcccgacctggcggccncgctgggccccagcaggggcgccgggcagaggccggacgcc
ggcctcatccacgccacgctgcgcaggaacaaccgcgaggcggcgctcaaggcggcgcag
ctggccgagcccccgcggccgccgccgcacccgcccaagcccaaggcggcgcagttcccg
gcgcggcccccgcccgccctgtacacctgcagccagtgcagcggcgcgggcgcgggcgcg
gcggggcggccggagcccggcgcggggcctggcgcctccccgctgacctcgcagtcgtcc
tacagcctcctgagcgcggccgacagcgcccgcgagcgcgccgactatgtcaactcggcc
ttcaccgaggacgaggcgctggcccagcactgtcaggccgacaaggccctgaggcacccc
gcgctgagcgaagccacggtggccgtgaaacggccgcccccgtaccagtgggaccccgtg
ctgggggaggacgtttgggttcctcaggaaaggacagcacagacggcagtgcccaacccc
ctgaaactgccccctctgatcgtgggtcagagccagcacctggacgtgtcccgagtgccc
ttcgtctcccccaagtctcccgccagccctactgccactttccagacaggctatgggatg
ggagcgccctacccaggaggctacaccacctccccgctgccgggagtgcaggcgccctgc
tccccgaaggaggccctggccccgccaccgtttgcacagcaagagtcctccgtggtcctt
cagcccgcctacccggccagcctctcctactgccccctgccccccatgtacccgggaagc
agcacctgctccagtttacagctgccgcccatcgccttgcacccctggaattcctacagc
gcgtgcccgcccgtgcagaacccccagggcaccctcccccccaaggcacacttggtggtg
gagaagcccctggtgtcccccccacccacggacctccaaagccacttgggtacagaggtg
atggtagagaccgcagacaacttccaggaagtcctctccctgacggaaagcccggtcccc
cagcgaacagagaaattcggaaagaagaaccggaagcggcttgacagccgagcagaggag
gccatcacggagggcaaggtgaagaaggaggctcggactttgagtgactttaattccctc
atctccagcccccgtttggggagagaaaagaagaaagtgaagagtcggaaagaccagctc
aagtcgaagaagttgaataagacaaatgagttccaggacagctctgagagcgagcccgag
ctgttcatcagcggggatgagctgatgaaccagagccaaggcagcaagaagggctggaag
agtaagaggagcttgagggcagccagcgagctggaggagttcaagtgcaggaaagccagt
gagaaggaggacgggcggctgggcagccagggcttcgtgtacgtcatggccaacaagcag
ccgctctggaatgaggccacccaggtgtaccagctggacttcggggggcgggtgacccag
gagtcggcaaagaacttccagatcgagctggaggggcggcaggtgatgcagtttggaagg
atcgacggcaacgcgtacatcctggacttccagtaccccttctcggctgtgcaggccttc
gcggtggccctggccaacgtgacgcagcgcctcaaatga

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