Sus scrofa (pig): 100627463
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Entry
100627463 CDS
T01009
Symbol
CYFIP1
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04810
Regulation of actin cytoskeleton
ssc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100627463 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100627463 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100627463 (CYFIP1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100627463 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
100627463 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
100627463
NCBI-ProteinID:
XP_020931266
Ensembl:
ENSSSCG00000021563
LinkDB
All DBs
Position
15:32064431..32175095
Genome browser
AA seq
1257 aa
AA seq
DB search
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMVQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQXLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLXGRMESVFNHAIRHTV
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVXLETGTNLQXPCLRGEXPQGGF
DIKVPRRAVGPSSTQSPPSLPLPALYLVRTMAESLSSAELLXQLKSLGAERLLHVVNAFX
RQSYTYPPLLTFGETLQQCCDLSQLWFREFFLELTMGRRIQFPXEMSMPWILTDHILETK
EASMMEYVLYSLDLYNDSAHYXLTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKV
MAGSLLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAM
YKSLELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDSFDAMFREANHNVSAPY
GRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNL
AYSSIYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVM
PKVCRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSL
EEVCDLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAR
EGDLLTKERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDDCVEFHRLWSAMQF
VYCIPVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEII
KNVPLKKMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQSLASS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaggtgaccctggaggatgctctgtccaatgtggacctgctggaagagctg
cctctgcccgaccagcagccatgcatcgagcccccaccatcctcactgctctaccagcca
aatttcaacactaactttgaagacagaaatgcatttgtcactggcatcgcaagatacatt
gaacaagcgactgtccattctagcatgaatgagatgctggaggaaggtcaagagtacgct
gtcatgctgtacacctggaggagctgctctcgggctatcccacaggtgaagtgtaacgaa
cagcccaatagagtggaaatttatgagaaaactgtggaggttcttgagcctgaagtcaca
aaactgatgaattttatgtacttccagaggaatgccatcgagcgtttctgtggggaggtg
aggcgcctgtgccacgcggagagaaggaaggacttcgtttctgaagcctacctgatcacc
ctgggcaagttcatcaacatgtttgctgtgttggatgagctgaagaacatgaagtgcagc
gtgaagaatgaccactctgcctacaagagggctgctcagtttttacgtaaaatggcagat
ccacagtccatccaggaatcacagaatctatccatgttcctggccaaccacaacaagatc
acacaatctctgcagcagcagcttgaagtgatttctggctatgaagagctcttagcagac
atcgtgaatttgtgtgtggattactatgaaaataggatgtatttgacgcccagtgagaaa
cacatgcttctcaaagtcatgggatttggtctgtacttgatggatgggagtgtcagcaac
atttataaactagatgccaagaaaagaataaacttatccaaaatcgacaagtacttcaag
cagctccaggtggttccgctgtttggggacatgcaaatagaactggcaagatacatcaag
accagcgctcactatgaggaaaataaatctcggtggacgtgcacatcctctagcagcagc
ccacagtacaacatctgcgagcagatggtccagatccgagaggaccacatgcgcttcatc
tcggagctggcacgatatagcaacagcgaggtggtcacaggctcgggccgccaggaggct
cagaagacagacgctgagtaccggaagctcttcgacctggcactgcagggcctgcagntg
ctgtcgcagtggagcgctcacgtgatggaagtgtactcatggaaacttgtgcacccaacg
gacaagtactccaacaaggactgccccgacaatgctgaggagtatgagcgggccacccgc
tacaactacaccagtgaggagaagtttgccctggtggaggtgattgccatgatcaaaggc
ttgcaggtcctgnatggcaggatggagagcgtgttcaaccatgccatccgccacaccgtc
tacgctgcactgcaggacttctcccaggtcaccctcagggagccgctcaggcaagccatc
aagaagaagaagaacgttatccagagtgtcctgcaggccatcaggaagaccgtgtgactg
gagacaggcacgaaccttcaatgaccctgccttcggggtgaangaccccaaggtggcttc
gacattaaagtgcctcggcgcgccgtgggaccctctagcacccagtctcctccctcgctc
ccgcttcctgctctctacctggtgcgcaccatggcggagtccttgagctctgccgagctg
ctcnagcagctcaagtctttgggcgcggaaaggctcttgcatgtggttaacgcgtttntg
aggcagtcctacacctatccgcctcttttaacctttggtgagacgctccagcagtgctgt
gacctttcacagttgtggttccgagagttcttcctggagctgaccatgggtagaaggatc
cagttcccanttgagatgtccatgccctggatcctgacagaccatatcctggagaccaag
gaggcatcgatgatggagtacgtcctctactcactggacctgtacaatgatagtgcccac
tacngcctcaccaggttcaacaagcagtttctctacgatgaaatcgaggcagaggtgaat
ctatgctttgaccaatttgtttataagctggcagaccagatatttgcgtattataaggtt
atggcgggaagtttgcttcttgataaacggttacgatcagagtgcaagaatcagggagca
acaatccacctccctccatctaaccgctatgaaacgctgctcaagcagaggcacgtgcag
ctcctgggcaggtccatagacctcaatcgtctgattacccagcgcgtctcagccgccatg
tacaagtccctggaactggcaattgggcgattcgagagtgaagatctgacgtcaatagtc
gagctggacggcctcttggaaatcaaccgcatgacccacaagctgctgagcaggtacctg
actctggacagcttcgatgccatgttccgggaggccaaccacaacgtgtcggcaccctat
gggaggatcactctccacgtcttctgggagctcaactacgacttcctgcccaactactgc
tacaatggctccaccaatcgatttgttcggacagtattaccattttctcaagaatttcaa
agggataaacagccaaatgcacaaccccagtatttgcatggatcaaaggctttaaacctg
gcctattcgagcatctatggcagctaccggaacttcgtgggccccccccacttccaggtc
atctgccggctgcttggctaccagggcatcgcagtggtcatggaagagctgctgaaggtg
gttaagagcctgctgcaaggcaccatcctgcagtacgtgaagacgctgatggaggtgatg
cccaaggtctgccggctgccgcggcacgagtacggctcccctggcatcctggagttcttc
caccaccagctgaaggacatcgtggagtacgcggagctgaagaccgtgtgcttccagaac
ctgcgggaggtgggcaatgccgtcctcttctgcctgctcatcgagcagagcctgtctttg
gaagaagtgtgtgacctgctgcatgcagccccgttccagaacatattgccgagagtccac
gtgaaagagggagagagacttgatgccaaaatgaaaagactagaatcaaagtacgcccca
cttcatcttgtccctctgattgaaagactgggaacccctcagcaaattgcaatagcgaga
gagggggacctgctgacaaaggagcgtctctgctgtggcctgtccatgtttgaagtcatc
ctgactcggatccggacctttctggatgaccccatctggcgtgggcctctgcccagcaac
ggggtcatgcacgtggatgactgcgtcgagtttcacaggctgtggagcgccatgcagttt
gtctactgcattcccgtggggacacatgagtttacggttgaacagtgttttggcgacggg
ctccactgggctggctgcatgatcatcgtgcttctggggcagcagcggcgctttgctgta
ctggatttttgctatcatctcctcaaagtccagaaacatgatggcaaagatgaaattatc
aaaaatgtgcctttgaagaagatggtggagagaattcggaagttccagattctcaatgat
gagataatcactatcttggacaagtacttgaagtcaggcgacggagagagcacgcctgtg
gagcacgttcgctgctttcagccacctattcaccaatccctggccagcagctga
DBGET
integrated database retrieval system
