KEGG   Sus scrofa (pig): 100627510
Entry
100627510         CDS       T01009                                 
Symbol
CDH6
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-6
  KO
K06798  cadherin 6, type 2, K-cadherin
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    100627510 (CDH6)
Cell adhesion molecules [BR:ssc04515]
 Cadherins
  Major cadherins
   100627510 (CDH6)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_CELSR2_9th Cadherin_4 7TM_GPCR_Srw
Other DBs
NCBI-GeneID: 100627510
NCBI-ProteinID: XP_003359784
Ensembl: ENSSSCG00000016806
UniProt: A0A8D0I4Q8 A0A480PJS1
LinkDB
Position
16:17531862..17660081
AA seq 790 aa
MRTYRYFLLLFWVGQPYPTFSTPLSKRTSGFPAKKRALELSGSSKNELNRSKRSWMWNQF
FLLEEYTGSDYQYVGKLHSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATRRLDREE
KPVYILRAQAINRKTGRPVEPESEFIIKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQ
VTATDADDPTYGNSAKVVYSILQGQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKD
MGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKXPESSPPGTPIGRIKASDADMGEN
AEIEYSITEGEGLDMFDVITDQETQEGIITVKKILDFEKKKVYTLKVEASNPHVEPRFLY
LGPFKDSATVRIMVEDVDEPPVFSKLAYILQIREDAQINTTIGSVTAQDPDAARNPVKYS
VDRHTDMDRIFNIDSGNGSIFTSKLLDRETLLWHNITVIATEINNPKQSSRVPLYIKVLD
VNDNPPEFAEFYETFVCEKAKADQLIQTLRAVDKDDPYSGHQFSFSLAPEAASGSNFTIQ
DNKDNTAGILTRKNGYNRHEMSIYLLPVVISDNDYPVQSSTGTVTVRVCACDHQGNMQSC
HAEALVHPTGLSTGALIAILLCIVTLLVTVVLFAALRRQRKKEPLIISKEDIRDNIVSYN
DEGGGEEDTQAFDIGTLRNPEAIEDSKLRRDIVPEALFLPRRTPAARDNTDVRDFINQRL
KENDTDPTAPPYDSLATYAYEGTGSVAESLSSLESATTDGDQDYDYLSDWGPRFKKLADM
YGGVDSDKDS
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgagaacttaccggtacttcttgctactcttttgggttggtcagccctacccgactttc
tcaacgccattgtctaagaggactagtggtttcccagccaagaaaagagccctggagctc
tctggaagcagcaaaaatgagctgaaccgttcaaaaaggagctggatgtggaatcagttc
tttctcctggaggaatacacaggatccgattatcagtatgtgggcaagttacactcagac
caggatagaggggatggatcacttaaatacatcctttcaggagatggagcaggagatctc
ttcattatcaatgaaaacacaggggatatacaggccacaaggaggctggacagggaagaa
aaacctgtttacatccttcgagctcaggctataaacagaaaaacagggagaccggtggag
cccgagtctgaattcatcatcaagatccatgacatcaacgacaatgaaccaatattcacc
aaggaggtttacacagccactgttcccgaaatgtctgatgtcggcacatttgttgtccaa
gtcactgcaaccgatgctgatgacccgacatacgggaacagtgctaaagttgtctatagc
atcctccagggacagccctatttttcagttgaatcagaaacaggtatcatcaagacagcc
ttgctcaacatggatcgagaaaacagggagcagtaccaagtggtgattcaagccaaggat
atgggcggccagatggggggattatctgggaccaccacagtgaacatcacgctgacagac
gtcaatgacaaccctccccggttcccccagagtacctaccagtttaaanaccccgaatcc
tctccaccgggtacaccaattggcaggatcaaagccagcgatgctgacatgggagaaaat
gctgaaattgagtacagcattacagagggagaggggctggacatgtttgatgtcatcacc
gatcaggaaacccaggaagggattataactgtcaaaaagatcttagactttgaaaagaag
aaagtgtacaccctcaaagtggaagcctccaatcctcacgttgaaccccgctttctctac
ctgggtccattcaaagattcagccacagttagaattatggtggaagatgtagacgagccc
cctgtcttcagcaaactggcctacatcctacaaataagagaagatgctcagataaacaca
acgataggttcggtcacagcccaagatccagatgctgccaggaatcctgtcaagtattct
gtcgatcgacacacagatatggacagaatattcaacatcgattctggaaatggttcgatt
tttacatcgaaacttcttgaccgagaaacattgctgtggcacaacattacagtgatagca
acagagatcaataatccaaagcaaagcagccgcgtacctctatatattaaagttctagat
gttaatgacaaccccccagaatttgctgaattctatgaaacctttgtctgtgaaaaagca
aaagcagatcagttgattcagaccctacgagccgttgacaaggatgacccttacagcggg
caccagttctcattctctttggcccccgaagcagccagtggctcaaactttaccattcaa
gacaacaaagacaacaccgcgggaatcttaactcggaaaaatggctataatagacatgag
atgagcatctatctcctgcctgtggtcatatcagacaacgactacccagttcaaagcagc
actgggacagtgactgtccgggtctgtgcatgtgaccaccaagggaacatgcagtcctgc
catgcggaggccctcgtccaccccacgggactgagcacgggggctctgattgccatcctt
ctgtgcatcgtgaccctactagtgacagtggtgttgtttgcagctctgaggcggcagcgg
aaaaaagaacctttgatcatttccaaagaggacatcagagacaacattgtcagttacaac
gacgaaggtggcggagaagaggacacgcaggcctttgatattggcaccctgaggaatcct
gaagccatagaggacagcaaattacgcagggacatcgtgcccgaagccctttttctaccc
cgacggactccagcggcgcgtgacaacaccgacgtccgagatttcattaaccaaaggtta
aaggaaaatgacacagaccccaccgccccgccctacgactccttggccacctacgcctac
gagggcaccggctcggtggccgagtccctgagctcgctggagtcggcgaccacggatgga
gatcaagactacgattacctgagtgactgggggcctcggttcaaaaagcttgcagatatg
tacggaggggtggacagtgacaaggactcctaa

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