Sus scrofa (pig): 100627568
Help
Entry
100627568 CDS
T01009
Symbol
PSMD2
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2
KO
K03028
26S proteasome regulatory subunit N1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03050
Proteasome
ssc05010
Alzheimer disease
ssc05012
Parkinson disease
ssc05014
Amyotrophic lateral sclerosis
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05020
Prion disease
ssc05022
Pathways of neurodegeneration - multiple diseases
ssc05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100627568 (PSMD2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100627568 (PSMD2)
09164 Neurodegenerative disease
05010 Alzheimer disease
100627568 (PSMD2)
05012 Parkinson disease
100627568 (PSMD2)
05014 Amyotrophic lateral sclerosis
100627568 (PSMD2)
05016 Huntington disease
100627568 (PSMD2)
05017 Spinocerebellar ataxia
100627568 (PSMD2)
05020 Prion disease
100627568 (PSMD2)
05022 Pathways of neurodegeneration - multiple diseases
100627568 (PSMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ssc03051
]
100627568 (PSMD2)
Proteasome [BR:
ssc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
100627568 (PSMD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
THAP
Motif
Other DBs
NCBI-GeneID:
100627568
NCBI-ProteinID:
NP_001230406
Ensembl:
ENSSSCG00000023998
UniProt:
A0A480JRT9
A0A8D0IXB5
LinkDB
All DBs
Position
13:122187500..122199397
Genome browser
AA seq
908 aa
AA seq
DB search
MEEGGRDKASLQTQQPPATSPGGGDEKSSSKERRDAGDKDKEQELSEEDKQLQDELEMLV
ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKR
FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKTQ
REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYV
PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR
HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG
SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLW
DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG
SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ
TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY
AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI
AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE
VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP
YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL
PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL
RKNPNYDL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcggccgggataaggcgtcgctgcagactcagcagcccccagcgacgtcc
cccggcggcggggacgagaagtcgagcagcaaggagcggcgagatgccggggacaaggac
aaagagcaggagctgtctgaggaggacaaacaacttcaggatgaactggagatgctcgtg
gaacgacttggggagaaggacacgtccctgtaccgaccagccctggaagaactgcggaga
cagattcgttcttctacaacttccatgacatcagtacccaagcctcttaaatttctgcgt
ccacactatggcaaactgaaggagatctatgagaacatggcccctggggagaataagcgt
tttgctgctgacatcatctctgttttggccatgaccatgagcggggagcgagagtgcctc
aaatatcgtctagtgggctcccaggaggagttggcatcatggggtcatgaatatgtcaga
catctggcaggagaggtggctaaggagtggcaggagctggatgatgcggagaagactcag
cgggagccactgctgaccttggtaaaggagattgtcccatacaacatggcccacaatgca
gaacatgaggcctgtgacctgctcatggaaattgagcaggtggatatgctggagaaagac
attgatgagaatgcatatgcaaaagtctgcctctatcttactagttgtgtgaattatgtg
cccgagcctgagaactccgccctactacgttgcgccttgggtgtgttccgaaagttcagt
cgcttccctgaagctctgagattggcactgatgctcaatgacatggagctggtagaagat
attttcacctcctgcaaggatgtggttgtacagaagcaaatggcattcatgctaggccgg
catggagtgtttttagagctgagtgaagatgtggaggagtatgaggacctgacagagatc
atgtccaatgtacagctcaacagcaacttcttggcattagctcgggagctggacatcatg
gagcccaaggtgcctgatgacatctataaaacccacctagagaacaacaggtttgggggc
agtggctctcaagtggactctgcccgtatgaacctggcctcctcttttgtgaacggcttc
gtgaatgcagcctttggccaagacaagttgctgactgatgatggcaacaaatggctttat
aagaacaaggaccatggaatgttgagtgcagctgcctcccttggcatgattctgctgtgg
gatgtggatggtggccttacccagatcgataagtacctgtactcttctgaggactatatc
aagtcaggagccctcctggcctgtggcatcgtgaactctggtgtccgaaatgagtgtgac
cctgctctagcactgctctcagactatgtcctccacaatagcaacactatgagacttggt
tccatctttgggcttggcctggcctatgccggctctaatcgcgaagatgttctaacactg
ctgctacctgtgatgggagattccaaatctagtatggaggtggcaggtgtgacagctcta
gcctgtggaatgatagcagtaggatcctgcaatggagatgtcacctccactatccttcag
accatcatggagaagtcagagactgagcttaaggacacttatgctcgttggcttcctctt
ggacttggcctcaaccacctggggaagggagaggctatcgaggccatcctggctgcgcta
gaggttgtgtcagaaccgttccgaagttttgccaacacactggtggatgtgtgtgcctat
gcaggctctgggaatgtactcaaggtgcagcagctgctccatatttgcagtgaacacttt
gactccaaggaaaaggaggaagacaaagacaagaaggaaaagaaggacaaggacaagaag
gaagcccctgctgacatgggagcacatcagggagtggctgtgctgggcattgcccttatt
gctatgggggaggagattggtgcagagatggcactgcgaacctttggccacctgctgagg
tacggggagccaacactccgaagggctgtgcctttagcactggccttaatctctgtttca
aatccacgactcaacatcctggataccctgagcaaattctctcatgatgctgacccggag
gtctcttataactcaatctttgccatgggcatggtgggcagtggtaccaataatgcccgt
ctggctgcaatgcttcggcagttagcccagtatcatgccaaggaccccaacaacctcttc
atggtgcgcttggcacagggcctgacacatttggggaagggcacactcaccctctgcccc
taccacagtgaccggcagcttatgagtcaagtggctgtggcggggttgctcaccgtgctt
gtctctttcctggatgttcgcaacatcattctaggcaagtcacactatgtattatatggg
ctggtggctgccatgcagccccgaatgctggtcacatttgatgaggagctgcggccattg
ccagtgtctgtccgtgtgggccaggcagtagatgtggtgggccaggccggcaagcctaag
accatcacagggttccagacgcacacaaccccagtgttgttggctcatggggagcgggca
gaattggccactgaggaatttcttcccgtcacccccatcctggaaggttttgttatcctt
cggaagaaccccaactatgacctctaa
DBGET
integrated database retrieval system
