Sus scrofa (pig): 100627932
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Entry
100627932 CDS
T01009
Symbol
HOXC6
Name
(RefSeq) homeobox protein Hox-C6 isoform X1
KO
K09306
homeobox protein HoxA/B/C6
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100627932 (HOXC6)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100627932 (HOXC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100627932
NCBI-ProteinID:
XP_003355472
Ensembl:
ENSSSCG00000030585
UniProt:
A0A4X1WBT9
A0A8D0NKJ8
LinkDB
All DBs
Position
5:19230227..19243522
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AA seq
235 aa
AA seq
DB search
MNSYFTNPSLSCHLAGGQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQEN
VVFSSSRGPYDYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASI
QIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL
TERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAADSLGGKEEKREETEEEKQKE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctacttcaccaacccttccttatcctgccacctcgccgggggccaggacgtc
ctccccaacgtcgccctcaattccaccgcctatgatccagtgaggcatttctcgacctat
ggagcagccgttgcccagaaccggatctactcgactcccttttattcgccacaggagaat
gtcgtgttcagttccagccgggggccgtatgactatggatctaattccttttaccaggag
aaagacatgctctctaactgcagacaaaacaccttaggacataacacacagacctcaatc
gctcaggattttagttctgagcagggcaggactgcgccccaggaccagaaagccagtatc
cagatttacccctggatgcagcgaatgaattcgcacagtggggtcggctatggagcggac
cggaggcgcggccgccagatctactcgcggtaccagaccctggaactggagaaagaattt
cacttcaaccgctacctaacgcggcgccggcgcatcgagatcgccaacgcgctgtgcctg
accgagcgacagatcaaaatctggttccagaaccgccggatgaagtggaaaaaagagtct
aatctcacgtccacgctctcagggggcggcggaggggccgcggccgacagcctgggcgga
aaagaggaaaagcgggaagagacagaagaggagaagcagaaagagtga
DBGET
integrated database retrieval system
