Sus scrofa (pig): 100627935
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Entry
100627935 CDS
T01009
Symbol
CNGB1
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04022
cGMP-PKG signaling pathway
ssc04024
cAMP signaling pathway
ssc04740
Olfactory transduction
ssc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100627935 (CNGB1)
04022 cGMP-PKG signaling pathway
100627935 (CNGB1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
100627935 (CNGB1)
04740 Olfactory transduction
100627935 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100627935 (CNGB1)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100627935 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Nop14
Motif
Other DBs
NCBI-GeneID:
100627935
NCBI-ProteinID:
XP_020953192
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Position
6:complement(19752734..19865830)
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AA seq
1336 aa
AA seq
DB search
MLSWVQRVLPQPPGNPRKTRREEAGVEPEPELEPETAPEETELEEESLPPAEPSKGTEEA
AADQGPQESQEAAPPPPTSLQAQVAVVPEVNSGPSGWVLTWLRKGVEKVVPQPVHNGGGS
AQSTAACMQGPAQAGAQILGHCSTGGSVGLTEGGVGAQGSLLLLTIFLPSADGPHVVPRA
QDAGPGPWLLRWFEQNVEKMLPQPLKTSEGWRDESADAALGPEPPGPPLEMKPTQQAQES
PSPPAPCPPEPEEELFPDPQPDIQASSPPLPGDSARLGAWLLHRLEMALPQPVLRGKAGE
QEADSPVTCDVQTISIQPGGQEEPTLILQEAHPHWEEDEHQEGSASPQDSEAAPADEEEI
EVLEQVPRELPRIQEENEEEEEEDGEEEEQNREEEEDGEEEEEEEQEPDHSVLLDSCLVA
QGDQDQSGVGGTQHQSASDQELQEAAEATSSGAPRSRLCLRPTPGPSTMAKPGRDMELNH
LVQDQPPGQVAPGLGPPNLVEHLPNVPSYRPPITRIPVLISRRTALSNSNFAKETRSSIR
RLVPATEEHPEVLVEDTDPDSQPLIEEEKKPPSPVLPPPSPATSDTLAVPGSATGSLRXG
KDQAQDDEAEELKVLSPAVSPVVAWSDPTSPQGTDAQDRAASTSSQNSAIINDRLQELVK
LFKERTEKVKEKLIDPDVTSDEDSPKPSPAKKAPEPAPDQKPAEAGQAEEEHYCEMLCCK
FKRRPWKKYQFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQTPDNVHLWLL
VDYLCDLIYLLDITVFQLRLQFVRGGDVITDKKEMRDNYLKSQRFKMDMLCLLPLDFLYL
KFGVNPLLRLPRCLKYLAFFEFNNRLESILSKAYVYRVIRTTAYLLYSLHVNSCLYYWAS
AYQGLGSTHWVYDGVGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQGLNYFTGVFAFS
VMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRSVQNRVKTWYEYTWHSQGMLDE
SELMVQLPDKMRLDLAIDVNYDIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKG
EIGREMYIIQAGQVQVLGXPDGKSVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFTN
LFILDKKDLNEILVHYPESQKLLRKKARRMLRNNNKPKEKSVLILPPRAGTPKLFNAALA
AAGKLGGAKGAKGGKLAHLRARLKELAALEAAARQQQQLEQAKSLEDAAGEGGSAAPEQP
REEGSAAPEQPAPPEPPAPRSPSPASQGRPEGDKEGXAGPEEHSVRIHVSPGPDPDEQIL
SVEIPEEKEEEKKEEE
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgggtccagagggtgctgcctcagcccccggggaaccctcggaagaccagg
agagaggaggcgggggtggaaccagagccagagctggagcctgaaacagccccggaggag
acagagctagaggaagagtccctgccacctgcggagccctccaaggggacggaagaggct
gcagctgatcagggccctcaggaaagccaggaggctgcccctcctccgcccacatccctc
caggctcaggtcgctgtggtgcccgaagtgaacagcggtcccagcggctgggtgttgacc
tggctcaggaagggcgtggagaaggttgtcccgcagcccgtccacaacggtggcgggtcc
gcccagagcactgctgcctgcatgcagggtccagctcaggcaggagcgcagatccttggg
cactgcagcactgggggctcagttgggctgaccgaggggggtgtgggggctcagggcagc
ctcttgctgctgaccatcttccttccctctgcagatggtccccacgtggtccccagggcc
caagacgctggacccgggccctggctgctcaggtggttcgagcagaatgtggagaaaatg
ctgcctcagcccctgaaaacctctgagggctggagagacgagtctgcagatgccgccttg
ggtccagagcccccaggaccccccttggaaatgaagcccacgcagcaggcccaggagagc
ccctccccgcctgctccctgccccccagagcctgaggaggagctgtttccagacccccag
cctgacatccaggcctcctccccgccgctgcccggggactctgccaggttgggggcctgg
ctcctgcaccggctggagatggccctgccacagccagtgctccgcgggaaggctggggag
caggaggctgattcccctgtgacgtgtgacgtgcagaccatcagcatccaacctggaggg
caggaggagcccacgctcatcctacaggaggctcaccctcactgggaggaggacgagcat
caggagggcagtgccagcccgcaggactcagaggcagctcccgctgatgaagaggagatc
gaagtgctggagcaggtgcccagggaactgcctcggattcaagaggagaatgaagaagag
gaagaggaggacggagaggaggaggagcagaacagagaggaggaggaggacggagaggaa
gaggaagaggaggagcaggagcccgatcacagtgtcctgctggatagctgtctggtggca
cagggtgaccaggaccagagtggagtaggcgggacacagcaccagagcgcctcagaccag
gagctgcaggaggcggctgaggccaccagctcaggagcccccaggtcacgcctctgcctg
agacccacccctggccccagcaccatggctaaaccaggccgggatatggagctgaatcac
ctggttcaggaccagccacctggccaggtggcccccggacttggccccccaaacctcgtg
gagcatctccccaatgtgcccagctaccgccccccaatcacccgcatccctgtcctcatc
tcccggaggacagccttgtccaactccaactttgccaaggagaccaggagctccatccgt
cgcctagtgccggctacggaggagcacccagaagtactggtggaagatacggatcccgac
agccagcccctcatcgaggaggagaagaaaccaccctcgcccgtgctgccgcccccttcc
cctgccacatctgacaccctcgcagtcccaggatcggccacagggagcctcaggtagggg
aaggaccaggcccaagacgatgaggctgaagagctcaaggtgctgtcaccagctgtgtcc
cctgtggtcgcctggtcagaccccaccagcccacagggcaccgatgcccaggaccgcgca
gcttccacctccagccaaaacagtgccatcatcaacgaccggctccaggagctggtgaag
cttttcaaggagcggacagagaaggtgaaggagaagctcatcgaccctgatgtcacctct
gatgaggacagtcccaagccctcaccagccaagaaagccccagaaccagccccggaccag
aagccggctgaagcagggcaggcggaggaggaacactattgcgaaatgctctgctgcaag
ttcaaacgccgcccctggaagaagtatcagtttccccagagcatcgacccactgaccaac
ctgatgtacatcctgtggctgttcttcgtggtgctggcctggaactggaactgctggctg
attcccgtgcgctgggccttcccctaccagacaccggacaacgtccacctctggctgctg
gtggattacctgtgcgacctcatctacctcctggacatcactgtgttccagctgcgcctg
cagtttgtcagaggcggggacgtcattacggacaagaaggagatgcgagacaactacctg
aagtcccagcgctttaagatggacatgctctgcctcctgcccttggactttctctacttg
aaattcggtgtgaatcctcttctgcgcttgcctcgctgtttgaagtacctggccttcttc
gagttcaacaaccgcctggaatccatcctcagcaaagcctatgtttacagggttatcagg
accacagcctacctgctctacagtttacatgtgaactcatgtctgtactattgggcgtcg
gcctatcagggcctgggctccactcactgggtttacgacggcgtaggaaacagttacatt
cgctgttactactgggctgtgaagaccctcatcaccattggtggcctgcccgaccccaag
acgctcttcgaaattgtcttccaggggctgaattatttcacaggtgtcttcgctttctcc
gtgatgatcggacagatgagagacgtggtgggggccgccaccgcggggcagacctactac
cgcagctgtatggacagcacggtcaagtacatgaacttctacaagatccccaggtccgtg
cagaaccgggtcaagacctggtatgagtacacctggcactcccaaggcatgctggacgaa
tcagagctgatggtgcagcttccagacaagatgcggctggaccttgccatcgatgtgaac
tacgacatcgtcagcaaagtggcactcttccagggctgtgaccggcagatgatcttcgac
atgctgaagaggcttcgctctgtcgtctacctgcccaacgactacgtgtgcaagaagggg
gagataggccgggagatgtacatcatccaggcggggcaggtgcaggtcctgggcnggccc
gatgggaagtctgtgttggtgacgctaaaagctggatctgtgtttggagaaataagcttg
ctggctgttgggggcgggaaccggcgcacggctaacgtggtggcccacggcttcaccaac
ctcttcattctggataagaaggacctgaatgaaattttggtgcattatccggaatctcag
aagttgctccggaagaaggccaggcgaatgctgagaaataacaacaagcccaaggagaag
agcgtgctcatccttcctccgcgggcgggcacccccaagctcttcaacgccgccctggcc
gcagcaggcaagctgggcggcgccaagggggccaaaggcggcaagcttgcccacctcagg
gcccgactgaaggagctggctgcgctggaggctgctgcaagacagcagcagcagctggaa
caggccaagagcttagaagatgctgccggagagggaggctcagctgccccagagcagccc
agagaggagggctcggccgccccagagcagcctgcgcccccggagccccctgccccgcgc
tctccatcacccgcctcccaggggaggccggagggagacaaggagggcngcgccgggccg
gaggagcactcggtgcggatccacgtgagcccggggccggatcccgatgagcagatcctg
tcggtggagatccccgaggagaaggaggaggagaagaaagaggaagagtga
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