Sus scrofa (pig): 100628033
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Entry
100628033 CDS
T01009
Symbol
HOXC11
Name
(RefSeq) homeobox protein Hox-C11
KO
K09296
homeobox protein HoxC/D11
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100628033 (HOXC11)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100628033 (HOXC11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100628033
NCBI-ProteinID:
XP_020947383
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All DBs
Position
5:19181580..19189031
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AA seq
304 aa
AA seq
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MFNSVNLGNFCSPSRKERGADFGERGSCASNLYLPSCTYYVPEFSTVSSFLPQAPSRQIS
YPYPAQVPPVREVSYGLEPSGKWHHRNSYSSCYAAADELMHRECLPPSTVTEILMKNEGS
YGGHHHPSAPHAAPAGFYSSVNKNSVLPQAFDRFFDNAYCGGGDAPAEPPCPGKGEAKGE
PEAPPASGLAARAEAGAEAEAEEEHTNPSSSGSAHSAAKEPAKGAAPNAPRTRKKRCPYS
KFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSG
NPLL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggtcaacctgggcaacttctgctcgccgtcgcgcaaggagaggggcgct
gatttcggcgagcgagggagctgcgcctccaacctctatctgcccagttgcacttactac
gtgcccgagttctccacggtctcctccttcctgccccaggccccctctcgtcagatctcc
tatccctacccggcccaagtgcccccggtccgggaggtctcctacggcctggagccctcc
ggcaagtggcaccaccggaacagctactcctcctgctatgcggcggccgacgagctcatg
caccgggagtgcctgcctccttccaccgtcaccgagatcctcatgaaaaacgaaggctcc
tacggcggccaccaccaccccagcgccccgcacgccgccccggccggcttctactcctcg
gtcaacaagaacagcgtcctgcctcaagccttcgaccgtttcttcgacaacgcctactgc
ggcggcggcgacgcgccggccgagcccccctgcccgggcaagggggaggccaagggggag
cccgaggcgcccccggcctcgggactggcggcccgggctgaggcaggggccgaggccgag
gccgaggaggaacacacgaatcccagctcgtccggttcagcccactcggcggccaaggag
ccggccaagggagccgcccccaacgccccccgcacccgcaagaagcgctgcccttattcg
aaattccagatccgggaactggagcgagagtttttcttcaacgtgtatatcaacaaagag
aagcggctgcagctgtcccggatgctgaacctgacggaccgacaagtgaaaatttggttt
cagaacagaaggatgaaagaaaaaaaactaagcagagaccggctgcagtatttctcggga
aatcctctgctgtaa
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