Sus scrofa (pig): 100628093
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Entry
100628093 CDS
T01009
Symbol
TOP1MT
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssc03032
]
100628093 (TOP1MT)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100628093 (TOP1MT)
DNA replication proteins [BR:
ssc03032
]
Eukaryotic type
DNA Topoisomerases
100628093 (TOP1MT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Motif
Other DBs
NCBI-GeneID:
100628093
NCBI-ProteinID:
XP_013848980
Ensembl:
ENSSSCG00000006958
LinkDB
All DBs
Position
4:1134179..1188149
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AA seq
976 aa
AA seq
DB search
MDTEEVMGDGHTSDLKLFSVKDKLVPTRKRENPDQMKVKNPKKRNVKGPDQKSQEGRGKG
QQRLKEESTFFVSKDTRSAQSAQPLKTHNHEKPSKKKGQGSSEDGALQAVPSGQDGEKAL
RPGTLGEGDKEPTDASQGSDRLKGKRKQTKNRGKKCAEEKQEGREEKGAGSRCRALGPRE
GSGDWRGAAGRGLGLGASGEAAQAGDRDTGAEGSKEDTQVAGEAATAGKAGDTEKAGGSA
GRTPLQGEGEEGRGPSAVVEAKPEGGAEFIAGGKCSSETVVSRKDKKRRKGNAAGAGAPE
AKELSGGDGARGREAARPGRGAPRKDVQQRQEGRRCGPETGRGVEELVGATSGGKVRKRN
REASEGPETEGEGTWKWWEEERSPRGVRWTQLEHRGPCFAPPYEPLPDGVRFYYDGKPMK
LSLAAEEVATFYGKMLEHEYTTKEVFRHNFFRDWRKEMTAAERKVIKRLSKCDFTEIHRH
FADRAAARRALPREEKQRLKEEAEKLQQEFGYCILDGHREKIGNFKTEPPGLFRGRGDHP
KMGMLKRRVLPEDVTINCGRDSKVPEPPAGHQWKEVRSDRTVTWLAAWTENVQNATKYVM
LNPSSKLKGERDWEKYEVARRLKGVVDEIRSRYRADWKSREMKARQRAVALYFIDKLALR
AGNEKEEGESADTVGCCSLRVEHVQLHPEADGCPYVVEFDFLGKDSIRYYNKVPVEKPVY
RNLQLFLENKDPGEELFDRLTTASLNKHLQDLMDGLTAKVFRTYNASITLQGQLRALTRA
DPVFQLKTASPLSCSLTTARTGPLPSSVTISGHLPRPSRSQCRLSGRRLRQRSSRWPRPR
QSWRRRGPATHPERTAGPRRGCPEGATPSWGRPRSASWRRGGGGWRSWRSSWCGWAHRPQ
TRRRASRWPWARPSSTTWTPGSASPGAGGLGCPSRRSTTRRRGRSLPGRWTWRARTSSSD
RASLGLIGCVWQLLHY
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggatacagaagaggtgatgggagacggtcacacgtccgatttgaagctgttctcggtg
aaggataagcttgtccccacaaggaagagggagaatcctgaccagatgaaagtaaaaaac
ccaaagaaacggaacgtgaaggggccagaccagaaaagtcaggaagggcgtgggaaaggg
cagcagcgtctgaaagaagaaagcacgttttttgtttcaaaagataccagatctgcacag
agcgcccagccactgaagacacataaccatgaaaaaccatccaagaaaaaaggccagggg
tcctctgaggacggggcgttgcaggctgtgcccagcgggcaagacggcgagaaggccctg
aggccgggcaccctgggagagggagacaaggagcccacagacgcaagccagggcagcgac
cggctgaaagggaagcgcaaacagaccaaaaatagagggaaaaagtgcgcagaggagaag
caggaagggcgtgaggagaaaggtgcagggagccggtgcagggcgttggggccgcgggag
ggcagtggggactggaggggggctgccgggaggggcctcgggctgggagccagcggggag
gcggcacaggcaggcgacagggacacgggagctgagggctccaaggaggacacgcaagtg
gcaggagaagcggccacagcggggaaggccggggacacggagaaggcaggagggtcggct
gggaggacgccgctccaaggtgagggcgaggagggcagaggcccctcggctgtcgtggaa
gctaagccagaaggcggtgcggaattcattgcgggtggcaagtgctcctcagagactgtg
gtgtccagaaaagacaaaaaaaggaggaagggcaacgcagcgggggcaggagctccagaa
gcaaaggaactgagcggaggggatggagcgcgggggagagaggccgcgaggcctggccgc
ggtgcgcccaggaaggacgtgcagcagcggcaggagggacgtcgatgtggcccggagacg
ggcagaggcgtagaggagctggtcggtgcgacatccggaggaaaagtcaggaaaaggaac
cgcgaggccagcgaagggccggagaccgagggagaaggcacgtggaaatggtgggaagag
gagaggagcccccgcggcgtgaggtggacgcagctggagcacagaggcccgtgcttcgcg
cccccgtacgagccccttccggatggagtccgcttctactacgacggaaagcccatgaag
ttgagcttagcagccgaggaggttgccacgttttacgggaaaatgttggagcacgaatac
acaaccaaagaagttttccggcacaacttcttccgtgactggcggaaggaaatgacggca
gccgagaggaaggtcatcaagcgcctgagcaagtgcgacttcacggagatccacagacac
ttcgcggacagggccgcggcccggagggccctgccccgggaggagaagcagaggctcaaa
gaagaggcggagaagcttcagcaggagtttggctactgtatcttggacgggcaccgagag
aagataggcaatttcaagacggagccgcccggcttgttccggggccgcggcgaccacccc
aagatggggatgctgaagcggagggtcctgccggaggacgtgaccatcaactgcggcagg
gactcaaaagtaccagagcccccggcaggccaccagtggaaggaggtgcggtcggaccgc
acggtcacatggctggcggcgtggacggagaatgtgcagaatgccaccaagtatgtcatg
ctgaaccccagctcgaagctcaagggggagagagactgggaaaagtacgaagtggctcgg
cgcttgaaaggcgtggtggacgagatccgttctcggtaccgggccgactggaagtctcgg
gaaatgaaggcgagacagcgcgctgtagccctttatttcatcgacaagctggcgctgcga
gctgggaacgagaaggaggagggcgagtcggccgacaccgtgggctgctgctccctccgc
gtggagcacgtccagctgcacccagaggccgacggctgcccctatgtcgtggaattcgac
ttcctggggaaggactcgatccgctactacaacaaagtgccggtggagaagcccgtctac
aggaacctgcagctcttcttggagaacaaagacccgggggaggagctctttgaccgactg
actaccgccagcctgaacaagcacctgcaggacctgatggacgggctgacggccaaagtc
ttccggacctacaacgccagcatcaccctgcagggccagctgcgagcactcaccagagcc
gaccctgtctttcagctgaagacagcatcgccgctaagctgctctcttacaaccgcgcga
accgggccgttgccgtcctctgtaaccatcagcgggcacctcccaagaccttcgagaagt
caatgcaggctctccggtcgaagattgaggcaaagaagcagcaggtggccgaggccaagg
cagagctggagaaggcgagggccggccacgcatccagagaggacggcaggtccgaggcgc
gggtgtccggaaggtgcgaccccgagttggggtcggccacggtcagcttcctggagaaga
ggcggcggcggctggagaagctggaggagcagctggtgcggctgggcacacaggccacag
acaaggaggagggcaagcaggtggccctgggcacgtccaagctcaactacctggaccccc
ggatcagcatcgcctggtgcaggaggtttggggtgcccgtcgagaagatctacaacaaga
cgcagagggagaagtttgcctgggcgctggacatggcgggcgaggacttcgagttctgat
cgggcctccctgggcctcatcggatgcgtttggcagcttctgcactactaa
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