Sus scrofa (pig): 100689265
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Entry
100689265 CDS
T01009
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100689265 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100689265 (TRIM54)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100689265 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF349
CoiA_N
Sina_RING
PHP
DD_DDX21-DDX50
DUF1421
MIF4G_like_2
Zn_ribbon_FGT1_2
Mod_r
DUF5799
Spectrin
Motif
Other DBs
NCBI-GeneID:
100689265
NCBI-ProteinID:
NP_001231288
UniProt:
G0WLG4
LinkDB
All DBs
Position
3:complement(111836038..>111852468)
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AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCHHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHTKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCAVLEERKGELLQALAKVQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFRVSVEHVAEMLRTIDFQPGASGEEEDEEVALDGEEGSAGPEEERPDGP
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctgggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccagtggtgatcctg
ccctgccaccacaacctctgccgcaagtgtgccaacgatgtcttccaggcctcgaaccct
ctgtggcagtcccggggctccaccactgtgtcttcgggaggccggttccgctgcccgtcc
tgccgtcacgaggttgtcctggaccgacacggcgtctacggcctgcagcgaaacctgctg
gtggagaacatcattgacatttacaagcaggagtcctcccggccactgcacaccaaggct
gagcagcacctcatgtgtgaggagcatgaggacgagaagatcaacatctactgcctgagc
tgtgaagtccccacctgctccctctgcaaggtcttcggtgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgtcagaagagtgaactcagcgatggcatcgcaatg
ctggtggcaggcaatgaccgtgtgcaagcagtgatcacccagatggaggaggtgtgccag
actattgaggacaatagccggaggcagaagcagttgctaaaccagaggtttgaagccctg
tgcgcggtgctggaagagcggaagggtgagctgctgcaggcgctggccaaggtacaggag
gagaagctgcagcgggtcaggggcctcatccgccagtacggagaccacctagaggcctcc
tctaagctggtggaatctgccatccaatccatggaggagccgcagatggcactctacctg
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaggtggagctggcgggg
cggccggagccaggctatgagagcatggagcaattcagggtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccaaccaggcgcttccggggaggaagaggatgaggag
gtagcgttggacggggaagagggcagcgcggggccagaggaagagcggccggatgggccg
gaaggactgcactga
DBGET
integrated database retrieval system
