Sus scrofa (pig): 100736926
Help
Entry
100736926 CDS
T01009
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04110
Cell cycle
ssc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100736926 (SMC1B)
04114 Oocyte meiosis
100736926 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100736926 (SMC1B)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100736926 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
100736926 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ATG16
Motif
Other DBs
NCBI-GeneID:
100736926
NCBI-ProteinID:
XP_020947047
Ensembl:
ENSSSCG00000000017
UniProt:
A0A4X1W4S1
A0A287BR93
LinkDB
All DBs
Position
5:3976098..4067148
Genome browser
AA seq
1235 aa
AA seq
DB search
MGHLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKN
IQELIHGAHIGKPVSSSASVRIVYVEESGEEKTFTRIIRGGCSEFHFDDNPVSRSSYIKE
LEKIGIIVKARNCLVFQGTVESISLKKPKERTQFFEEISTSGELVREYEEKKRRLQKAEE
DAQFNFNKKKNIAAERKHAKLEKEEAERYQNLLEELKINKIQLQLFQLYHNERKIHFLNT
ELKRVNEDLSVTKESLSRHENIVKAKKKEHGMLSRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQIEEEILH
KGRDIELEASQLDRYKELKEQVRKKVAIMTQQLEKLQWEQKADEERLAFEKRRHGEAQEN
LKQVKEQIEDHKKRIEKLEEYTKACMTCLEEKKQQEKTLVDEIAKTKSRMSEVNEELNLI
RSELQNAGIDNHEGRRQQKRAEVLEHLQRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVVKT
QFPQLRKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKELKNLRDKRTQLIQELKDLMKALRKEADLKQIQALIQGTHTRLKYSQSELE
IIQKKHLAAFYREQSQLQSELLNIESQCTMLSEGIRKRQQRIEGFQEKIDKVEDDIFQHF
CEEIGVENIREFENKHVKQQQEIDQKRLEFEKQKTRLNIQLEYSRNQLKKKLNRINTLKE
TVQKGREDIDNLKKTEENCLKIVDELTEKRQRLKDVFVTQNSNIEKVQAQTEEERKKFLA
VDREVGKLQKEALAIQTSLEQKRLEKHNMLLDCKVQDIEIILLSGSLEDIIEVELGAEAE
STQATTDVYEQEEAIEVDYSLLREDLRALQTDKEVEAHLKLLLQQVASQEDILLKTAAPN
LRALENLKAVRDKLQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQCFEHVSVSIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEFYSKADALIGIY
PEQDDCMFSRALTLDLSQYPETEGRESSRRQREPR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccatttggagctgctgcttgtggagaatttcaagtcgtggcggggccgccaggtc
ataggccccttcaggaggttcacctgcatcatcggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtcatgggagaaaaaattgctaatttaagagtgaaaaat
attcaagaacttattcatggggcacatattggcaaacctgtttcttcttctgcaagtgtg
agaattgtgtatgtggaggaaagtggagaagagaaaacatttacaaggattatccgaggg
ggatgctcagaatttcattttgatgataatcctgtgagtcgttcttcttatattaaagag
ctggaaaagataggcataatagtcaaagcccggaactgtctggtttttcagggaactgtg
gaatcgatttcgttgaaaaaacccaaagaaagaacacagtttttcgaggaaatcagcact
tctggggagctcgtaagagaatatgaggaaaagaaaaggaggttacagaaggctgaagaa
gacgcacagtttaattttaataagaagaagaatatagctgcagaacgcaaacatgcaaaa
ttagagaaagaagaggcagaacgctaccagaatctccttgaagaacttaaaataaataag
atacaactgcagcttttccaactgtatcacaatgagagaaaaattcattttctgaacact
gagttgaaacgtgtgaatgaggatttgagtgtcacaaaagagtctctttctcgtcatgaa
aacatagttaaagccaagaaaaaggagcatggaatgttaagcagacaactacaacaaaca
gaaaaagaattaaaatctcttgaagcacttttaaatcagaagaggcctcagtacattaaa
gcaaaagaaaacacttcgcaccacctcaagaaattagatgtggctaagaaatcaataaag
gacagcgaaaaacaatgttctaaacaggaagatgacataaaagccttagagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcagattgaagaagaaatcttacac
aaagggagagacattgaactagaagccagtcagctggaccgttataaagaacttaaggaa
caagtgagaaagaaagtggctataatgacccaacaactggaaaaactgcagtgggaacag
aaggctgatgaagaaagactggcatttgaaaagaggaggcacggagaagctcaggaaaat
ctaaaacaagtaaaagaacaaatagaagatcataaaaagagaatagaaaagttggaggag
tatacaaaagcatgcatgacttgcttggaggagaaaaagcagcaagagaaaaccctagtg
gatgaaattgcgaaaacaaaatcgagaatgtctgaagtgaacgaagagttgaatcttatc
aggagtgaactgcagaatgcgggaatcgataaccacgaggggagacgtcagcaaaagaga
gcagaggttctggagcaccttcagagactctacccagattctgtgtttggaagactgctt
gacctctgtcatcctattcataagaaataccagctggctgttacgaaactctttggccgg
tacatggtcgccattgtcgtagcctctgaaaaggtagcgaaggattgtattcgatttctg
aaggaagaaagagctgagcccgagacattccttgctctggattaccttgatatcaagcca
atcaatgaaagattaagggagatcaaaggctgtaaaatggtgattgatgtcgtaaagact
cagtttcctcagctgaggaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
acggtggaagaagcgaggcacattgccttcggtggacctgaaagacggaaaacagtagct
cttgatggaacattatttttaaaatctggggtgatctctggagggtcaagtgacttaaaa
tacaaggctagatgctgggatgagaaagagttaaagaatttaagagacaaaagaacccag
ctaatccaagaattaaaggatttaatgaaagcacttcgcaaggaagcagatttgaaacaa
atacaggcactaatacaaggaactcatacgcgactcaaatattcgcaaagtgaactagaa
ataattcaaaagaagcaccttgctgctttttaccgggaacagtctcagctacaaagcgaa
ctgctgaatattgagtcacagtgtactatgttgagtgaaggaatcagaaaacggcaacaa
agaattgaaggatttcaggaaaagatagataaggttgaagatgatatttttcaacacttc
tgtgaagaaattggcgtagaaaatattcgtgaatttgagaacaaacatgttaaacagcaa
caagaaattgatcagaaaagattagaatttgagaaacaaaaaactcggctaaatattcaa
cttgaatatagtcgcaatcagctgaagaagaaactgaataggattaacacattaaaagaa
actgtccagaaaggtagagaagacattgataacctaaagaagacagaagaaaattgtctg
aaaattgtggatgaactcacggagaaacggcagcgacttaaggacgtatttgtcactcag
aattccaacattgagaaagtccaagctcaaactgaagaggaacggaagaagtttttggct
gttgatagggaagtgggaaaattgcaaaaagaagctctagccattcagacttctctcgaa
cagaaacggttagagaaacataacatgttgctggattgcaaagttcaagacattgaaata
attcttttgtcggggtcattggaagacatcattgaagtggagttgggcgctgaagcagaa
agtacccaggcaacgaccgacgtgtatgaacaggaagaagccattgaggtggactacagc
ctgctgcgagaggatttaagggctctacaaactgataaggaagttgaggcccaccttaaa
ctcctgctgcaacaagtagcatcccaagaagacatcctgctgaagacggcggccccaaac
ctgcgcgccctggagaacctgaaggctgtgcgagacaagcttcaggagtccacagacgct
tttgaggccagcagaaaggaagccagaatgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatatgatcttttcagccagtgttttgagcacgtctcagtctcaattgatcagatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccggagaaccccgaa
gagccgtacttggagggcatcagctacaactgcgtggccccaggcaaacggttcatgccc
atggataatctgtccgggggagagaagtgcgtggcagcgctggccctcctgttcgctgtg
cacagttttcggcctgctccgttctttgttttagacgaagtggatgcagccctggacaac
actaacattggcaaagtgtcaagttacatcaaggagcagactcaggaacagtttcagatg
ataattatttccctgaaagaagagttctattccaaagctgatgcgctgataggcatctat
ccagagcaagacgactgcatgttcagccgagctttgaccctggacctttctcagtatcca
gaaaccgaggggagagagagcagcaggaggcagcgggagccccgttag
DBGET
integrated database retrieval system
