Sus scrofa (pig): 100737051
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Entry
100737051 CDS
T01009
Name
(RefSeq) LOW QUALITY PROTEIN: cat eye syndrome critical region protein 2
KO
K25830
cat eye syndrome critical region protein 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100737051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100737051
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
CERF complex
100737051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
KIAA2026_hel
WSD
DDT
DUF285
PRTRC_E
Motif
Other DBs
NCBI-GeneID:
100737051
NCBI-ProteinID:
XP_020948162
LinkDB
All DBs
Position
5:69621871..69747730
Genome browser
AA seq
1336 aa
AA seq
DB search
MRPEEGGAAALGELRSWWEVPAIAHFCSLFRTAFRLPDFEIEELEAALHRDDVEFISDLI
ACLLQGCYQRRDITPQTFHSYLEDIINYRWELEEGXPNPLREARFQDLPLRTRVEILHRL
CDYRLDADDVFDLLKGLDADSLRVEPLGEDNSGALYWYFYGTRMYKEDPVQGKSNGELSL
SRESEGQKNVSGVPGKTGKRRGRPPKRKKLQEEMIVSEKQEENYLASEPQTRNGSQGPGQ
GSWWLLCQTEQEWRQVTESFRERTSMRERQLYKLLSEDFLPEICNMIAQKETPVLNKMEK
QKRREEEEERQILLAVQKKEQEQLLKEERKRELAERVKAVEDRAKRRKLREERAWLLAQG
KTLPPELSHLDPPSPLREEKRTKDPFELDDDFTAMYKVLDVVKAHKDSWPFLEPVDESYA
PNYYQIIKVPMDISSMEKKLNGGLYCTKEEFVSDMKTMFRNCRKYNGESSEYTKMSENLE
RCFHRAMLKHFPGEDGDTDEEFWVREDEKREKRRSRAARGGGSHVCTRSRDTEGPSRRQQ
PAENGGKSLPPGRRASSSGDGRGGVPSQPPREAGTSNGRGLPGALRYSGAPSHTPLSNQM
RPAVQGPFCPPRGSDPAAVHLHAGPPEPRPGGPGQQRPLAMQPPAGMNHHHGPGRGAPAE
EPVGGGLAHLADVGSCPGSLQLGQMSSPTPDGHVFPPTHFQPAFIPPRLSGAPARPPDFP
ESSEISPSHVYRPYKYLNRVHPAVWNGNHGAANSGPLGPDEKTPMGPGPSHQPRTLGPVM
DSRVLRPPLPPHPWTEQSGFLPHGVPSPGYMRPPCKSGGHRLQPPPGPAAGSLFGAPAQA
LRGVPSGDSMMDSPEMIAMQQLSSRVGPPADPVPGLEEKAAGVGASEGMFLKQLPHPTPT
LQTDCARRSSPQGRDLEAPEHRNEPSEPGDGCKASVGRTAWPSGGSFASPVAQGCTLADR
GVLSENGVRVEADSQSRALQEAVLPTEPACTPLYVPGLEYPGSTARYHLGPGLPAVGPVM
GGKPPAPHPQPFPPRAFQAPDPHSGVFPRYRPPQGMRYPYQHPPQPSYPHYQRTPYYPCP
QGFSDWPRHVPPPGSPGGPPPAQPAPARPLFSDKSAAAGLRGCEALGAALTSPTRADTVA
AKSADGQNPGPEEKQDESAERPESPKEFLDLDNHTAATKRQSSLSAEYLYRTPPAPLSSG
MGFGPAAFPPHGVVLPPGPAYPPQRPASHFQPRAFSSPAAAPPPLRPGVAQPNGLSPECP
LYRCPEEGLGHFQAVMMEHVGTGSGSRAPFQEAYRPAGVQTHPVQPQPSFPKTPAAATMQ
EELPPQKPPTLPLDQS
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgaagagggcggcgcggcggcgctgggcgagctgcgctcgtggtgggaagtg
ccggccatcgctcacttctgctcgctcttccgcacggcgttccgcctgccggacttcgag
atcgaggagttagaagcagctcttcacagagatgatgtggagtttatcagtgacctgatc
gcctgcctgcttcagggctgctatcagcgaagagacattacgcctcagacattccacagc
tacctggaggacatcatcaactaccgctgggagctggaggaagganagcccaacccgctg
agggaagcccgtttccaagacctgcctctgcgcacccgcgtggagatccttcaccgcctc
tgtgattaccggttggatgctgatgatgtcttcgatcttctcaagggtctggatgcagac
agtctccgtgtggaaccattgggcgaggacaattctggggccctctactggtatttttat
ggaacacgaatgtacaaggaggaccccgtgcaaggaaaatccaatggcgagctctctttg
agcagggaaagcgaaggacaaaaaaatgtgtcaggtgttcctgggaaaacaggaaaaaga
agaggaagacccccaaaacggaaaaaactgcaggaggaaatgatagtgagtgaaaagcag
gaagaaaactacttggcatcggagccacagacaagaaatgggtcacaggggccaggccaa
ggctcatggtggcttctgtgccagacagagcaagagtggaggcaggtcaccgagagcttt
cgggagaggacctcaatgcgggagcggcagctgtacaagctcctcagcgaggacttcctg
cccgagatctgcaacatgatcgcccagaaggagactcctgtgctcaacaagatggagaag
cagaagcgcagggaggaggaggaagaacggcagatcctgctggctgtgcagaagaaggag
caggagcagctgctgaaggaggagcggaagcgggagctggcagagagggtcaaggcagtg
gaagatcgagccaagaggaggaaactccgggaagagcgggcctggctgctggctcagggg
aagacactgccgcctgagctctcccacctggaccctccgtcgccacttcgggaagagaag
aggaccaaggacccctttgagctggacgacgacttcactgccatgtacaaagttctggat
gtggttaaggctcacaaggattcctggccctttttggaacctgtggatgaatcatatgcc
cctaactattaccagattattaaggtccccatggacatttcaagcatggaaaagaaactg
aacggaggtttatactgcaccaaggaggagtttgtcagtgacatgaagaccatgttcagg
aattgtcgcaaatacaacggggagagcagtgaatacaccaagatgtccgagaacctggag
aggtgcttccaccgggccatgctcaagcattttcctggtgaagatggggacacagacgaa
gagttctgggtcagagaggacgagaagcgggagaagaggcgcagtcgggcagcgcgtgga
ggcgggagccacgtgtgcacacgctccagggacactgaggggcccagccggagacagcag
cccgcagagaacggagggaagtcgctgccacctgggcgccgagcttcctcctctggggat
ggtcgaggtggtgtcccctcgcagccccctcgtgaggcgggtacctccaatggccgtggc
ttgccgggagccctgcgttacagtggcgcacctagtcatacgcccctttcaaaccagatg
aggcccgcggtgcagggaccgttctgtcccccccgagggtcagatcctgcggctgtgcat
ctccatgctggaccccctgagccgcgccccggaggacctggacagcagcggcctttagca
atgcagcctccagctggaatgaaccaccaccacgggcccggccgaggcgcccctgctgag
gagccagtgggcgggggcctggctcaccttgctgatgtgggttcatgtcctggatccttg
cagctcgggcagatgagcagccccactccggatggacatgtgttcccccctacccacttc
cagccagcgtttattcctcccaggctcagtggggctccggcccgacccccagactttcct
gagagctcagaaatctctcccagccatgtgtaccggccctacaagtacctgaaccgagta
caccctgcggtctggaatgggaaccacggtgctgccaactcaggacccttggggccagac
gagaagacccccatggggccaggaccctcacaccagcctcgcacgttgggtcccgtgatg
gattcccgggtgctgaggccacccctccccccacacccatggactgaacaatcaggcttt
ctacctcacggagttccttctcccggatacatgcgaccaccctgtaaatctggtggacat
cgattacagccacctcccggcccggcggcagggtctctgtttggagcgccggcccaggcc
ctgcggggggtgccgagtggagactccatgatggacagcccggagatgatcgccatgcag
cagctctcctcccgcgtgggcccaccagcagatcccgtgcccgggctcgaggagaaagca
gcaggcgttggtgcttcagaggggatgttcctcaagcagctacctcaccccacacccacc
ctgcagactgactgtgccaggcggagctcaccgcagggccgggacctggaggccccagag
cacaggaatgagccctcagaacctggagacggctgtaaagccagtgtgggcagaaccgcc
tggccctcagggggcagcttcgccagcccagtcgcccagggatgcaccctggcagaccgg
ggagtgctgtctgaaaatggagtgagggtggaagctgacagccagagccgagcgctgcag
gaggctgtgctgcccacggagcctgcctgcacccccctgtatgtgcccggcctggagtac
cccggctcgactgcacggtaccacctgggcccaggcctgccagcagtgggccccgtgatg
ggcggcaagcccccggccccgcaccctcagcctttccccccacgggcgttccaggctccc
gaccctcattctggagtcttcccccgataccgccccccccagggcatgcggtatccctac
cagcaccccccgcagccgtcctacccccactatcagcggactccctattacccgtgtccg
cagggcttctcggactggccgagacacgtccccccgccgggaagcccgggtgggcccccg
ccggcccagcctgcccccgccaggcccctcttctccgacaagagcgccgcggctgggctg
cgcggctgcgaggccctgggcgccgcgctgacctccccgactcgggcggacaccgtggcg
gccaagagcgcggacggccagaaccccggcccagaggagaaacaggacgagtctgccgag
aggccagagagtcccaaagagttcctagacctggacaaccacaccgcggctaccaagcgg
cagagctccttgtcagccgagtacctgtacaggacgcccccggctcccctgagctcaggg
atgggcttcggtccagctgccttccccccgcacggcgtcgtgctgccgccggggccggct
tacccacctcagcggccggccagtcacttccagcccagggccttctcctcccccgcggcg
gctcccccaccgctccgcccaggggtggcccagcccaacggcctgtccccagagtgcccc
ctctaccgctgcccggaagagggcctgggccactttcaggctgtgatgatggaacacgtg
ggcactgggagtggatcgagggcgcctttccaggaggcgtacagaccagcaggagtgcag
acgcacccggtccagccccagccctcgttcccaaagacaccagcagctgcgacaatgcag
gaggagctgccaccgcagaagcccccaacgcttcctcttgatcagagctag
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