Sus scrofa (pig): 100737141
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Entry
100737141 CDS
T01009
Symbol
GRIK5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5 isoform X1
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100737141 (GRIK5)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100737141 (GRIK5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100737141 (GRIK5)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
Glutamate (ionotropic)
100737141 (GRIK5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
100737141
NCBI-ProteinID:
XP_020950090
Ensembl:
ENSSSCG00000003039
LinkDB
All DBs
Position
6:49840671..49901656
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AA seq
981 aa
AA seq
DB search
MPAELLLLLIVAFASPSCQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAK
ARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKV
GPEETPRLQYLRFASVSLYPSNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRG
FLISKETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFY
KYILTTMDFPILHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCDASTYPGP
ALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTG
RVEFNSKGQRTNYTLRILEKARQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVT
TILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGS
WTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFL
DPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFP
VGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLA
DQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAF
LLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILK
RKWWEGGRCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEV
SVCQEMLQELRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKLYSAGAGGDA
GGAHGGPQRLLDDPGPPGGARPSAPTPCTHVHVCQECRRIQALRASGAGAPPRGLGAPAE
ATSPPRPRPGPAGPRELAEHE
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgagctgctgctgctgctgattgttgccttcgccagccccagctgccaggtg
ctctcatcactgcgcatggctgccatcctggatgaccagacagtgtgtggccgtggcgaa
cgtctggccctggccctggcccgggagcagatcaacgggatcatcgaggtcccagccaag
gcccgcgtggaagtagacatcttcgagctgcagcgggacagccagtacgagaccacggac
accatgtgtcagatcctgcccaagggggtcgtgtctgtcctggggccctcctccagcccg
gcctctgcctccaccgtgagccatatctgtggggagaaggagatcccccacatcaaggtg
ggtcccgaggagacgccccgtctgcagtaccttcgcttcgcctctgtcagcctgtacccc
agtaatgaggacgtcagcctggcggtctcccgaatcctcaagtccttcaactacccttcg
gccagcctcatctgcgccaaggccgagtgcctgctgcgattggaggaactggtgcgtggc
ttccttatctccaaggagacgctgtcagtgaggatgctagatgacagccgggaccctacg
ccgctgctcaaggagatccgagacgacaaggtgtccaccatcatcatcgatgccaacgca
tccatttcccacctcattctccgtaaggcctcggagctgggaatgacctcagcgttttac
aagtacattctcaccaccatggacttccccatcctgcacctggacgggatcgtggaggac
tcctccaacatcctgggcttctccatgttcaacacctcgcaccccttctaccccgagttt
gtgcgcagcctcaacatgtcctggagggagaactgtgatgccagcacctaccccggcccc
gcgctgtcggctgccctgatgtttgacgctgtgcacgtggtggtgagcgccgtccgggag
ctgaaccgcagccaggagatcggcgtgaagccgctggcctgtacgtcagccaacatttgg
ccccacgggaccagcctcatgaactacctgcgcatggtagagtatgacgggctgaccggg
cgggtggagttcaacagcaaagggcagaggaccaactacaccctgcgcatcctggagaag
gctcggcagggccaccgtgagatcggggtgtggtactctaaccggaccctggccatgaac
gccaccaccctggacatcaacctgtcgcagacactggccaacaagacgctggtggtcacg
accatcctggagaacccgtatgtcatgcgccggcccaatttccaggccctgtcggggaat
gagcgctttgagggcttctgcgtggacatgctgcgcgagctggccgagctgctgcgcttc
cgctaccgcctgcggttggtggaggatgggctgtatggggcgcccgagcccaacggctcc
tggacgggcatggttggcgagctcatcaaccggcagaaggcagacctggccgtggctgcg
ttcaccatcacggccgaacgggagaaagtcatcgacttctccaaacccttcatgaccctg
gggatcagcatcctctaccgagtccacatgggccgcaagcctggctatttctccttcctg
gaccccttctcccctgctgtgtggctcttcatgcttcttgcctacctggctgtcagctgc
gtcctgttcctggcggccaggctgagcccctacgagtggtataacccgcacccgtgcctg
cgggcacgcccccacatcctggagaatcagtacacgctgggcaacagcctctggttccct
gtggggggcttcatgcagcagggctcggagatcatgccccgggcgctgtccacgcgctgc
gtcagcggagtctggtgggccttcaccttgatcatcatctcctcctacacggccaacctg
gccgccttcctcaccgtgcagcgcatggaggtgcctgtggagtcggccgacgacctggca
gaccagaccaacattgagtatggcactatccacgctggctccaccatgaccttctttcag
aattcccgctaccagacgtaccagcgcatgtggaactacatgcagtcgaagcagcccagc
gtgttcgtcaagagcacagaggagggcattgcccgcgtcctcaactcccgctacgccttc
ctgctcgagtccaccatgaacgagtaccaccggcgcctcaactgcaacctcacccagatc
gggggcctcctcgacaccaagggctacggcatcggcatgccgctgggctccccgttccgg
gatgagatcacactggctatcctgcagcttcaggaaaacaaccgactggagatcctgaag
cgcaagtggtgggagggtggccggtgccccaaggaggaggaccatcgagctaaaggtctg
ggcatggagaacatcggcggcatttttgtcgtgctcatctgtggcctcatcattgccgtc
ttcgtggcagtcatggaattcatatggtccacgcggaggtcagcagagtcggaagaggtc
tcggtgtgccaggagatgctgcaggagctgcggcacgcggtgtcctgccgcaagacctcg
cgttcccgccggcgccggcgcccaggaggcccgagccgggccctgctgtcgctgcgtgct
gtccgcgagatgcgcctcagcaacggcaagctctactctgccggcgcgggcggggatgcg
ggcggcgcgcacgggggtccccagcgcctcctggacgatccggggccgcccggcggggcc
cggccctccgcccctaccccttgcacccacgtgcatgtctgccaggagtgccggcgcatc
caggcactgcgggcctccggggccggtgcgcccccgcgtggcctgggagcacccgccgaa
gccaccagcccgccgcggccgcggcccggccccgccggcccccgcgagctggcggagcac
gagtga
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