Sus scrofa (pig): 100737559
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Entry
100737559 CDS
T01009
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100737559 (RNPS1)
03015 mRNA surveillance pathway
100737559 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100737559 (RNPS1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100737559 (RNPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100737559
NCBI-ProteinID:
XP_003481146
UniProt:
A0A8D1CZM0
A0A4X1VW60
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All DBs
Position
3:39739058..39749600
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AA seq
305 aa
AA seq
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MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSEEKSKDRSKDKGATKESSEKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS
SNSSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaataataaaaag
tccagcactagggctccttctcctaccaaacgcaaagaccgctctgaggaaaagtccaag
gaccgctctaaagataaaggggccaccaaggagtcgagcgagaaggaccgtggcagggat
aaaactcggaagaggcgcagcgcttccagtggtagcagcagcaccaggtctcggtccagc
tctacctccagctcaggctccagcaccagcacgggctccagcagtggctccagctcgtct
tcggcatcgagccgctcaggaagttccagcacatcccgcagctccagctccagcagttcc
tctggctctccgagtccttctcggcgcagacacgacaacaggcggcgttcccgttccaag
tccaaaccgcccaaaagagatgaaaaggagaggaagcggcggagcccttcccctaaaccc
accaaagtgcacatcgggaggctcaccaggaacgtgaccaaggatcacatcatggagata
ttctccacctacggcaagattaagatgatcgacatgcctgtggaaaggatgcaccctcat
ctctcgaagggctacgcctacgtggagttcgagaatccagatgaagccgagaaggcactg
aagcacatggacggaggacaaatcgatggccaggagatcactgccactgccgtgctggcc
ccctggcctaggccaccccccaggcgattcagccctcccaggagaatgctgccaccacct
cctatgtggcgcaggtcacccccacggatgaggagaaggtcgcggtcccccaggcgcagg
tcccctgtgcgccgacgatcccgctcccctggccgccgccgccacaggagccgctccagc
tccaactcctcccgataa
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